RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 NEMP2A6NFY4 417 aa11.29□□□□□ -0.6
CRNKL1-204ENST00000490910 A8MU76 341 aa11.29□□□□□ -0.6
CRNKL1-204ENST00000490910 H0YAE9 185 aa11.29□□□□□ -0.6
CRNKL1-204ENST00000490910 SLC2A4P14672 509 aa11.29□□□□□ -0.6
CRNKL1-204ENST00000490910 IDH2P48735 452 aaKnown RBP11.29□□□□□ -0.6
CRNKL1-204ENST00000490910 EMP3P54852 163 aa11.29□□□□□ -0.6
CRNKL1-204ENST00000490910 VBP1P61758 197 aa11.29□□□□□ -0.6
CRNKL1-204ENST00000490910 FAAH2Q6GMR7 532 aa11.29□□□□□ -0.6
CRNKL1-204ENST00000490910 AHSA2Q719I0 299 aa11.29□□□□□ -0.6
CRNKL1-204ENST00000490910 ILDR2Q71H61 639 aa11.29□□□□□ -0.6
CRNKL1-204ENST00000490910 LILRB4Q8NHJ6 448 aa11.29□□□□□ -0.6
CRNKL1-204ENST00000490910 ACDQ96AP0 544 aa11.29□□□□□ -0.6
CRNKL1-204ENST00000490910 MASTLQ96GX5 879 aa11.29□□□□□ -0.6
CRNKL1-204ENST00000490910 ACTR8Q9H981 624 aa11.29□□□□□ -0.6
CRNKL1-204ENST00000490910 RASSF1Q9NS23 344 aa11.29□□□□□ -0.6
CRNKL1-204ENST00000490910 FBXO9Q9UK97 447 aaPredicted RBP11.29□□□□□ -0.6
CRNKL1-204ENST00000490910 PCDHGA10Q9Y5H3 936 aa11.29□□□□□ -0.6
CRNKL1-204ENST00000490910 MFSD11O43934 449 aa11.29□□□□□ -0.6
CRNKL1-204ENST00000490910 AP2A1O95782 977 aa11.29□□□□□ -0.6
CRNKL1-204ENST00000490910 ATF4P18848 351 aaPredicted RBP11.29□□□□□ -0.6
CRNKL1-204ENST00000490910 IGFBP5P24593 272 aa11.29□□□□□ -0.6
CRNKL1-204ENST00000490910 ADORA2AP29274 412 aa11.29□□□□□ -0.6
CRNKL1-204ENST00000490910 MEP1AQ16819 746 aa11.29□□□□□ -0.6
CRNKL1-204ENST00000490910 PLET1Q6UQ28 207 aa11.29□□□□□ -0.6
CRNKL1-204ENST00000490910 SCIMPQ6UWF3 145 aa11.29□□□□□ -0.6
CRNKL1-204ENST00000490910 TMEM102Q8N9M5 508 aaPredicted RBP11.29□□□□□ -0.6
CRNKL1-204ENST00000490910 TSPAN18Q96SJ8 248 aa11.29□□□□□ -0.6
CRNKL1-204ENST00000490910 GAD1Q99259 594 aa11.29□□□□□ -0.6
CRNKL1-204ENST00000490910 TRIM54Q9BYV2 358 aa11.29□□□□□ -0.6
CRNKL1-204ENST00000490910 REEP1Q9H902 201 aa11.29□□□□□ -0.6
CRNKL1-204ENST00000490910 POU2F3Q9UKI9 436 aa11.29□□□□□ -0.6
CRNKL1-204ENST00000490910 MFHAS1Q9Y4C4 1052 aa11.29□□□□□ -0.6
CRNKL1-204ENST00000490910 NUAK1O60285 661 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 F7P08709 466 aaPredicted RBP11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 RAP2AP10114 183 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 GPD2P43304 727 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 GSK3BP49841 420 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 ALDH3A2P51648 485 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 ZNF460Q14592 562 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 ZNF404Q494X3 552 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 WDR45BQ5MNZ6 344 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 TMEM236Q5W0B7 351 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 CCDC149Q6ZUS6 474 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 PIWIL3Q7Z3Z3 882 aaKnown RBP11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 METTL6Q8TCB7 284 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 FAM151AQ8WW52 585 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 PIK3R3Q92569 461 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 HDAC2Q92769 488 aaKnown RBP11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 TMBIM1Q969X1 311 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 LRRC58Q96CX6 371 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 CATSPERBQ9H7T0 1116 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 RBM22Q9NW64 420 aaKnown RBP eCLIP11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 WDR70Q9NW82 654 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 DTLQ9NZJ0 730 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 MPP6Q9NZW5 540 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 C9IYK1 514 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 ADAM23O75077 832 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 L1CAMP32004 1257 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 GMPRP36959 345 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 CAP2P40123 477 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 ARSFP54793 590 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 CYP4F2P78329 520 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 CYP4F3Q08477 520 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 ZNF252P-AS1Q0IIN9 211 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 LAMTOR4Q0VGL1 99 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 BTG3Q14201 252 aaPredicted RBP11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 NPTX1Q15818 432 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 ZC3H12BQ5HYM0 836 aaKnown RBP11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 TPRG1LQ5T0D9 272 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 MZT2BQ6NZ67 158 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 LYSMD3Q7Z3D4 306 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 ZNF567Q8N184 647 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 OR56A4Q8NGH8 313 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 TWIST2Q8WVJ9 160 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 LHPPQ9H008 270 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 CCDC59Q9P031 241 aaKnown RBP11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 CRYL1Q9Y2S2 319 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 A0A1B0GTW7 788 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 AGRPO00253 132 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 BCAS1O75363 584 aaPredicted RBP11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 DNAJB5O75953 348 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 GLP2RO95838 553 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 CNPP09543 421 aaKnown RBP11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 HNF4AP41235 474 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 ZNF235Q14590 738 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 PHKG1Q16816 387 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 PLEKHG6Q3KR16 790 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 EFCAB12Q6NXP0 572 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 SLC39A4Q6P5W5 647 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 CYP4V2Q6ZWL3 525 aaPredicted RBP11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 NLGN1Q8N2Q7 840 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 CAMKK1Q8N5S9 505 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 OR52K2Q8NGK3 314 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 FAM45AQ8TCE6 357 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 BLOC1S5Q8TDH9 187 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 HEXDCQ8WVB3 486 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 MOCOSQ96EN8 888 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 YME1L1Q96TA2 773 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 FAM49AQ9H0Q0 323 aaPredicted RBP11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 NDFIP2Q9NV92 336 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms