RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 ATP2A1O14983 1001 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 CLIC2O15247 247 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 TGM5O43548 720 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 NARSO43776 548 aaKnown RBP3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 OPHN1O60890 802 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 PFDN1O60925 122 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 ZNF623O75123 536 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 E2F6O75461 281 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 SERPINB7O75635 380 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 TRMUO75648 421 aaKnown RBP3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 PSMD10O75832 226 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 SLITRK3O94933 977 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 LYPLA2O95372 231 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 TNFAIP8O95379 198 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 CLPTM1O96005 669 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 HMGCRP04035 888 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 POLR2MP0CAP2 368 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 HSPA1AP0DMV8 641 aaKnown RBP3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 HSPA1BP0DMV9 641 aaKnown RBP3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 ZNF23P17027 643 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 HMGB2P26583 209 aaKnown RBP3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 PEX2P28328 305 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 NMT1P30419 496 aaKnown RBP3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 MAPK4P31152 587 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 MAGEA6P43360 314 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 CDK9P50750 372 aaKnown RBP3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 HSD17B4P51659 736 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 KCNQ1P51787 676 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 NEK2P51955 445 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 MFAP3P55082 362 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 AQP4P55087 323 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 ADARP55265 1226 aaKnown RBP3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 TAS2R40P59535 323 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 NOP14P78316 857 aaKnown RBP3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 MYBPC1Q00872 1141 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 PDE1BQ01064 536 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 FOLH1Q04609 750 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 ZBTB16Q05516 673 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 BST1Q10588 318 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 OVGP1Q12889 678 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 PDIA2Q13087 525 aaKnown RBP3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 MPP3Q13368 585 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 MAMLD1Q13495 774 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 KRT81Q14533 505 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 EFTUD2Q15029 972 aaKnown RBP eCLIP3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 TRIP13Q15645 432 aaPredicted RBP3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 SEPT7Q16181 437 aaKnown RBP3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 ARHGAP44Q17R89 818 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 MYLK3Q32MK0 819 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 GRAMD1BQ3KR37 738 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 MMEL1Q495T6 779 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 NADK2Q4G0N4 442 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 INO80DQ53TQ3 878 aaPredicted RBP3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 CFAP157Q5JU67 520 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 STXBP5Q5T5C0 1151 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 C1orf146Q5VVC0 180 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 IRAK1BP1Q5VVH5 260 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 CES4AQ5XG92 561 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 KRT39Q6A163 491 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 NXNQ6DKJ4 435 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 RWDD4Q6NW29 188 aaKnown RBP3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 TIFABQ6ZNK6 161 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 RBM44Q6ZP01 1051 aaKnown RBP3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 C15orf39Q6ZRI6 1047 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 ARMCX2Q7L311 632 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 FAM160B2Q86V87 743 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 ZNF410Q86VK4 478 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 SLC47A2Q86VL8 602 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 RASSF3Q86WH2 238 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 PHF13Q86YI8 300 aaPredicted RBP3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 ERI1Q8IV48 349 aaKnown RBP3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 CHERPQ8IWX8 916 aaKnown RBP3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 TCEAL8Q8IYN2 117 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 DAW1Q8N136 415 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 LRRC71Q8N4P6 559 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 NIPA2Q8N8Q9 360 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 NAT8LQ8N9F0 302 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 GLIS1Q8NBF1 620 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 CATSPER1Q8NEC5 780 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 GDPD5Q8WTR4 605 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 CPT1BQ92523 772 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 EDAQ92838 391 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 KAT5Q92993 513 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 E2F7Q96AV8 911 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 ZNF503Q96F45 646 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 VCPIP1Q96JH7 1222 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 LRGUKQ96M69 825 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 AGAP3Q96P47 875 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 RMDN3Q96TC7 470 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 CYTH2Q99418 400 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 PCYT2Q99447 389 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 EIF2AK1Q9BQI3 630 aaKnown RBP3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 ASPSCR1Q9BZE9 553 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 INO80BQ9C086 356 aaPredicted RBP3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 TMEM117Q9H0C3 514 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 CXCL16Q9H2A7 254 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 PDZD7Q9H5P4 517 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 FAM96AQ9H5X1 160 aa3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 DHX33Q9H6R0 707 aaKnown RBP3.5□□□□□ -1.85
CRNKL1-203ENST00000490258 NRDE2Q9H7Z3 1164 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms