RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 TRAFD1O14545 582 aaPredicted RBP8.19□□□□□ -1.1
USP39-216ENST00000490193 PPM1DO15297 605 aa8.19□□□□□ -1.1
USP39-216ENST00000490193 FUCA1P04066 466 aa8.19□□□□□ -1.1
USP39-216ENST00000490193 PRKCGP05129 697 aa8.19□□□□□ -1.1
USP39-216ENST00000490193 UCHL3P15374 230 aa8.19□□□□□ -1.1
USP39-216ENST00000490193 MAP4P27816 1152 aaKnown RBP8.19□□□□□ -1.1
USP39-216ENST00000490193 TEAD1P28347 426 aa8.19□□□□□ -1.1
USP39-216ENST00000490193 RFC1P35251 1148 aaPredicted RBP8.19□□□□□ -1.1
USP39-216ENST00000490193 FASLGP48023 281 aa8.19□□□□□ -1.1
USP39-216ENST00000490193 NDST2P52849 883 aa8.19□□□□□ -1.1
USP39-216ENST00000490193 POLR2LP62875 67 aaKnown RBP8.19□□□□□ -1.1
USP39-216ENST00000490193 MC2RQ01718 297 aa8.19□□□□□ -1.1
USP39-216ENST00000490193 FMO1Q01740 532 aa8.19□□□□□ -1.1
USP39-216ENST00000490193 CDR2Q01850 454 aa8.19□□□□□ -1.1
USP39-216ENST00000490193 NSUN2Q08J23 767 aaKnown RBP eCLIP8.19□□□□□ -1.1
USP39-216ENST00000490193 ABHD18Q0P651 414 aa8.19□□□□□ -1.1
USP39-216ENST00000490193 VWA3BQ502W6 1294 aa8.19□□□□□ -1.1
USP39-216ENST00000490193 TMEM71Q6P5X7 295 aa8.19□□□□□ -1.1
USP39-216ENST00000490193 SRLQ86TD4 932 aa8.19□□□□□ -1.1
USP39-216ENST00000490193 HEATR4Q86WZ0 1026 aa8.19□□□□□ -1.1
USP39-216ENST00000490193 CREBRFQ8IUR6 639 aa8.19□□□□□ -1.1
USP39-216ENST00000490193 CBARPQ8N350 705 aaPredicted RBP8.19□□□□□ -1.1
USP39-216ENST00000490193 TSEN2Q8NCE0 465 aaKnown RBP8.19□□□□□ -1.1
USP39-216ENST00000490193 APOBEC4Q8WW27 367 aaKnown RBP8.19□□□□□ -1.1
USP39-216ENST00000490193 KIAA1143Q96AT1 154 aaPredicted RBP8.19□□□□□ -1.1
USP39-216ENST00000490193 RTP4Q96DX8 246 aa8.19□□□□□ -1.1
USP39-216ENST00000490193 SCARF2Q96GP6 870 aaPredicted RBP8.19□□□□□ -1.1
USP39-216ENST00000490193 ABHD17AQ96GS6 310 aa8.19□□□□□ -1.1
USP39-216ENST00000490193 ZPBPQ9BS86 351 aa8.19□□□□□ -1.1
USP39-216ENST00000490193 STK33Q9BYT3 514 aa8.19□□□□□ -1.1
USP39-216ENST00000490193 GPN2Q9H9Y4 310 aaPredicted RBP8.19□□□□□ -1.1
USP39-216ENST00000490193 PHPT1Q9NRX4 125 aaPredicted RBP8.19□□□□□ -1.1
USP39-216ENST00000490193 OCIAD1Q9NX40 245 aa8.19□□□□□ -1.1
USP39-216ENST00000490193 KCNK4Q9NYG8 393 aa8.19□□□□□ -1.1
USP39-216ENST00000490193 DONSONQ9NYP3 566 aa8.19□□□□□ -1.1
USP39-216ENST00000490193 TMEM184BQ9Y519 407 aaPredicted RBP8.19□□□□□ -1.1
USP39-216ENST00000490193 ST14Q9Y5Y6 855 aa8.19□□□□□ -1.1
USP39-216ENST00000490193 ITPR2Q14571 2701 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 ZNF106Q9H2Y7 1883 aaKnown RBP8.18□□□□□ -1.1
USP39-216ENST00000490193 A0A1W2PQ67 120 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 FAM170AA1A519 330 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 BLACEA4D250 179 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 FAM187AA6NFU0 413 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 J3KR12 359 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 NKX2-8O15522 239 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 DUX1O43812 170 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 IVLP07476 585 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 KRT3P12035 628 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 UNGP13051 313 aaPredicted RBP8.18□□□□□ -1.1
USP39-216ENST00000490193 CHRNB2P17787 502 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 GPD1P21695 349 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 AK4P27144 223 aaPredicted RBP8.18□□□□□ -1.1
USP39-216ENST00000490193 ERCC5P28715 1186 aaPredicted RBP8.18□□□□□ -1.1
USP39-216ENST00000490193 OAS2P29728 719 aaKnown RBP8.18□□□□□ -1.1
USP39-216ENST00000490193 AP1S1P61966 158 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 CTBSQ01459 385 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 MC1RQ01726 317 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 BCL2L1Q07817 233 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 KLRB1Q12918 225 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 RFTN1Q14699 578 aaPredicted RBP8.18□□□□□ -1.1
USP39-216ENST00000490193 C4orf17Q53FE4 359 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 LACTB2Q53H82 288 aaPredicted RBP8.18□□□□□ -1.1
USP39-216ENST00000490193 ANKS6Q68DC2 871 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 WDR59Q6PJI9 974 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 TRIM72Q6ZMU5 477 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 LIAT1Q6ZQX7 453 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 ARHGAP22Q7Z5H3 698 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 FAM114A1Q8IWE2 563 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 NLGN4XQ8N0W4 816 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 MLKLQ8NB16 471 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 C3orf20Q8ND61 904 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 NLGN4YQ8NFZ3 816 aaPredicted RBP8.18□□□□□ -1.1
USP39-216ENST00000490193 SLC20A1Q8WUM9 679 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 PATE1Q8WXA2 126 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 NUS1Q96E22 293 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 C11orf70Q9BRQ4 267 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 TUBGCP2Q9BSJ2 902 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 TRIT1Q9H3H1 467 aaKnown RBP8.18□□□□□ -1.1
USP39-216ENST00000490193 ZNF71Q9NQZ8 489 aaPredicted RBP8.18□□□□□ -1.1
USP39-216ENST00000490193 FBXO8Q9NRD0 319 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 TMEM9Q9P0T7 183 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 MOSPD1Q9UJG1 213 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 FZD10Q9ULW2 581 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 SUFUQ9UMX1 484 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 PLAAQ9Y263 795 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 SLC17A4Q9Y2C5 497 aa8.18□□□□□ -1.1
USP39-216ENST00000490193 LOC101059948A0A1B0GTJ6 334 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 TCRBV5S1A1TA0A578 114 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 ARHGAP42A6NI28 874 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 PRR19A6NJB7 356 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 SIGLEC16A6NMB1 481 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 EFCAB7A8K855 629 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 EIF3CLB5ME19 914 aaKnown RBP8.17□□□□□ -1.1
USP39-216ENST00000490193 PSMD11O00231 422 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 TEX33O43247 280 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 CCP110O43303 1012 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 HTRA2O43464 458 aaPredicted RBP8.17□□□□□ -1.1
USP39-216ENST00000490193 CREB3O43889 395 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 SOCS5O75159 536 aa8.17□□□□□ -1.1
USP39-216ENST00000490193 PALMO75781 387 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms