RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 DMRTA1Q5VZB9 504 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 RBM44Q6ZP01 1051 aaKnown RBP9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 Q6ZVL8 140 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 ZNF765Q7L2R6 523 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 GKN2Q86XP6 184 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 MAP7D3Q8IWC1 876 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 KYQ8NBH2 561 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 KCTD6Q8NC69 237 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 SLC35G2Q8TBE7 412 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 NSMCE1Q8WV22 266 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 CTNNBL1Q8WYA6 563 aaPredicted RBP9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 HDAC11Q96DB2 347 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 ATXN7L3BQ96GX2 97 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 RNF157Q96PX1 679 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 LYSMD1Q96S90 227 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 CCDC3Q9BQI4 270 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 POLR1EQ9GZS1 481 aaKnown RBP9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 TMEM168Q9H0V1 697 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 WDR26Q9H7D7 661 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 NT5MQ9NPB1 228 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 ABHD10Q9NUJ1 306 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 TRNAU1APQ9NX07 287 aaKnown RBP9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 DTLQ9NZJ0 730 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 CTTNBP2NLQ9P2B4 639 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 RPL26L1Q9UNX3 145 aaKnown RBP9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 SLC17A4Q9Y2C5 497 aa9.72□□□□□ -0.85
TMEM39A-210ENST00000490099 KIF26BQ2KJY2 2108 aa9.71□□□□□ -0.85
TMEM39A-210ENST00000490099 PRSS38A1L453 326 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 RRP8O43159 456 aaKnown RBP9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 CBFA2T2O43439 604 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 MFAP3LO75121 409 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 IVLP07476 585 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 MMP2P08253 660 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 CYP2A6P11509 494 aaPredicted RBP9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 GLB1P16278 677 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 MX2P20592 715 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 CCKBRP32239 447 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 ETV3P41162 512 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 STC1P52823 247 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 GABREP78334 506 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 IFI35P80217 286 aaPredicted RBP9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 CDK3Q00526 305 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 DSC2Q02487 901 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 PTSQ03393 145 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 ZFP36L1Q07352 338 aaKnown RBP9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 PPIDQ08752 370 aaKnown RBP9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 NIPAL4Q0D2K0 466 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 HLTFQ14527 1009 aaKnown RBP eCLIP9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 NR1D2Q14995 579 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 TAZQ16635 292 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 SLC9A4Q6AI14 798 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 TIGD7Q6NT04 549 aaPredicted RBP9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 CRTC1Q6UUV9 634 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 ADAMTSL4Q6UY14 1074 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 RFLNAQ6ZTI6 216 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 USP45Q70EL2 814 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 RD3Q7Z3Z2 195 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 ZNF438Q7Z4V0 828 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 CLEC14AQ86T13 490 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 TSPAN33Q86UF1 283 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 NRROSQ86YC3 692 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 SPACA3Q8IXA5 215 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 PLD5Q8N7P1 536 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 CNTD1Q8N815 330 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 CCL4L1Q8NHW4 92 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 SNRNP27Q8WVK2 155 aaKnown RBP9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 TADA1Q96BN2 335 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 NUS1Q96E22 293 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 CRELD1Q96HD1 420 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 BBC3Q96PG8 261 aaPredicted RBP9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 SMIM14Q96QK8 99 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 ABCG8Q9H221 673 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 MRPL40Q9NQ50 206 aaKnown RBP9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 PHPT1Q9NRX4 125 aaPredicted RBP9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 RBM22Q9NW64 420 aaKnown RBP eCLIP9.71□□□□□ -0.863e-7■■■■■ 34.1
TMEM39A-210ENST00000490099 GULP1Q9UBP9 304 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 INTUQ9ULD6 942 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 GPR34Q9UPC5 381 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 ST14Q9Y5Y6 855 aa9.71□□□□□ -0.86
TMEM39A-210ENST00000490099 TMX2-CTNND1H3BSU7 103 aa9.7□□□□□ -0.86
TMEM39A-210ENST00000490099 NUDT21O43809 227 aaKnown RBP9.7□□□□□ -0.86
TMEM39A-210ENST00000490099 AKR1B10O60218 316 aa9.7□□□□□ -0.86
TMEM39A-210ENST00000490099 FGF1P05230 155 aa9.7□□□□□ -0.86
TMEM39A-210ENST00000490099 ZNF30P17039 623 aa9.7□□□□□ -0.86
TMEM39A-210ENST00000490099 ABCG1P45844 678 aa9.7□□□□□ -0.86
TMEM39A-210ENST00000490099 HADHBP55084 474 aaKnown RBP9.7□□□□□ -0.86
TMEM39A-210ENST00000490099 CCL7P80098 99 aa9.7□□□□□ -0.86
TMEM39A-210ENST00000490099 SQSTM1Q13501 440 aa9.7□□□□□ -0.86
TMEM39A-210ENST00000490099 C14orf28Q4W4Y0 310 aa9.7□□□□□ -0.86
TMEM39A-210ENST00000490099 LRRC66Q68CR7 880 aa9.7□□□□□ -0.86
TMEM39A-210ENST00000490099 HEATR4Q86WZ0 1026 aa9.7□□□□□ -0.86
TMEM39A-210ENST00000490099 SFTPA2Q8IWL1 248 aa9.7□□□□□ -0.86
TMEM39A-210ENST00000490099 RHOT2Q8IXI1 618 aa9.7□□□□□ -0.86
TMEM39A-210ENST00000490099 NRSN1Q8IZ57 195 aa9.7□□□□□ -0.86
TMEM39A-210ENST00000490099 NDUFAF2Q8N183 169 aa9.7□□□□□ -0.86
TMEM39A-210ENST00000490099 LSM14AQ8ND56 463 aaKnown RBP9.7□□□□□ -0.86
TMEM39A-210ENST00000490099 ZNF248Q8NDW4 579 aa9.7□□□□□ -0.86
TMEM39A-210ENST00000490099 FAM46DQ8NEK8 389 aa9.7□□□□□ -0.86
TMEM39A-210ENST00000490099 WDR36Q8NI36 951 aaKnown RBP9.7□□□□□ -0.86
TMEM39A-210ENST00000490099 PDCD6IPQ8WUM4 868 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms