RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 OLFM3Q96PB7 478 aa17.81■□□□□ 0.44
ABCF3-217ENST00000489719 DEPDC7Q96QD5 511 aa17.81■□□□□ 0.44
ABCF3-217ENST00000489719 RBM15Q96T37 977 aaKnown RBP eCLIP17.81■□□□□ 0.44
ABCF3-217ENST00000489719 MLPHQ9BV36 600 aaPredicted RBP17.81■□□□□ 0.44
ABCF3-217ENST00000489719 TEX101Q9BY14 249 aa17.81■□□□□ 0.44
ABCF3-217ENST00000489719 GOLPH3Q9H4A6 298 aa17.81■□□□□ 0.44
ABCF3-217ENST00000489719 FGF22Q9HCT0 170 aa17.81■□□□□ 0.44
ABCF3-217ENST00000489719 SIRPGQ9P1W8 387 aa17.81■□□□□ 0.44
ABCF3-217ENST00000489719 A0A0U1RQS6 177 aa17.8■□□□□ 0.44
ABCF3-217ENST00000489719 ANKRD66B4E2M5 251 aa17.8■□□□□ 0.44
ABCF3-217ENST00000489719 PYGLP06737 847 aa17.8■□□□□ 0.44
ABCF3-217ENST00000489719 TGM2P21980 687 aa17.8■□□□□ 0.44
ABCF3-217ENST00000489719 TEAD1P28347 426 aa17.8■□□□□ 0.44
ABCF3-217ENST00000489719 SKOR1P84550 965 aa17.8■□□□□ 0.44
ABCF3-217ENST00000489719 TAZQ16635 292 aa17.8■□□□□ 0.44
ABCF3-217ENST00000489719 TEX44Q53QW1 395 aa17.8■□□□□ 0.44
ABCF3-217ENST00000489719 TFDP3Q5H9I0 405 aa17.8■□□□□ 0.44
ABCF3-217ENST00000489719 CDCP2Q5VXM1 449 aa17.8■□□□□ 0.44
ABCF3-217ENST00000489719 CCDC70Q6NSX1 233 aa17.8■□□□□ 0.44
ABCF3-217ENST00000489719 C11orf63Q6NUN7 778 aa17.8■□□□□ 0.44
ABCF3-217ENST00000489719 NYAP1Q6ZVC0 841 aa17.8■□□□□ 0.44
ABCF3-217ENST00000489719 B4GALNT4Q76KP1 1039 aa17.8■□□□□ 0.44
ABCF3-217ENST00000489719 ARL10Q8N8L6 244 aa17.8■□□□□ 0.44
ABCF3-217ENST00000489719 FAM46DQ8NEK8 389 aa17.8■□□□□ 0.44
ABCF3-217ENST00000489719 CCHCR1Q8TD31 782 aa17.8■□□□□ 0.44
ABCF3-217ENST00000489719 TFB1MQ8WVM0 346 aaKnown RBP17.8■□□□□ 0.44
ABCF3-217ENST00000489719 P3H4Q92791 437 aa17.8■□□□□ 0.44
ABCF3-217ENST00000489719 PDXPQ96GD0 296 aa17.8■□□□□ 0.44
ABCF3-217ENST00000489719 RBM41Q96IZ5 413 aaKnown RBP17.8■□□□□ 0.44
ABCF3-217ENST00000489719 SMIM14Q96QK8 99 aa17.8■□□□□ 0.44
ABCF3-217ENST00000489719 CEP41Q9BYV8 373 aa17.8■□□□□ 0.44
ABCF3-217ENST00000489719 TMEM168Q9H0V1 697 aa17.8■□□□□ 0.44
ABCF3-217ENST00000489719 SLC25A51Q9H1U9 297 aa17.8■□□□□ 0.44
ABCF3-217ENST00000489719 ABCG8Q9H221 673 aa17.8■□□□□ 0.44
ABCF3-217ENST00000489719 CD84Q9UIB8 345 aa17.8■□□□□ 0.44
ABCF3-217ENST00000489719 PRSS38A1L453 326 aa17.79■□□□□ 0.44
ABCF3-217ENST00000489719 CAPN8A6NHC0 703 aa17.79■□□□□ 0.44
ABCF3-217ENST00000489719 CLDN7O95471 211 aa17.79■□□□□ 0.44
ABCF3-217ENST00000489719 MMP2P08253 660 aa17.79■□□□□ 0.44
ABCF3-217ENST00000489719 STC1P52823 247 aa17.79■□□□□ 0.44
ABCF3-217ENST00000489719 CDK3Q00526 305 aa17.79■□□□□ 0.44
ABCF3-217ENST00000489719 QPCTQ16769 361 aa17.79■□□□□ 0.44
ABCF3-217ENST00000489719 RFLNAQ6ZTI6 216 aa17.79■□□□□ 0.44
ABCF3-217ENST00000489719 ZNF765Q7L2R6 523 aa17.79■□□□□ 0.44
ABCF3-217ENST00000489719 KDELC2Q7Z4H8 507 aa17.79■□□□□ 0.44
ABCF3-217ENST00000489719 RAVER1Q8IY67 606 aaKnown RBP17.79■□□□□ 0.44
ABCF3-217ENST00000489719 OR6C4Q8NGE1 309 aa17.79■□□□□ 0.44
ABCF3-217ENST00000489719 EXD1Q8NHP7 514 aa17.79■□□□□ 0.44
ABCF3-217ENST00000489719 IMP4Q96G21 291 aaKnown RBP17.79■□□□□ 0.44
ABCF3-217ENST00000489719 BAG1Q99933 345 aaPredicted RBP17.79■□□□□ 0.44
ABCF3-217ENST00000489719 SUDS3Q9H7L9 328 aaPredicted RBP17.79■□□□□ 0.44
ABCF3-217ENST00000489719 CARS2Q9HA77 564 aaKnown RBP17.79■□□□□ 0.44
ABCF3-217ENST00000489719 SAE1Q9UBE0 346 aaPredicted RBP17.79■□□□□ 0.44
ABCF3-217ENST00000489719 ARID1BQ8NFD5 2236 aaPredicted RBP17.79■□□□□ 0.44
ABCF3-217ENST00000489719 C1orf232A0A0U1RR37 186 aa17.78■□□□□ 0.44
ABCF3-217ENST00000489719 MTSS1O43312 755 aa17.78■□□□□ 0.44
ABCF3-217ENST00000489719 CEACAM5P06731 702 aa17.78■□□□□ 0.44
ABCF3-217ENST00000489719 FECHP22830 423 aa17.78■□□□□ 0.44
ABCF3-217ENST00000489719 RTP5Q14D33 572 aa17.78■□□□□ 0.44
ABCF3-217ENST00000489719 CCDC181Q5TID7 509 aa17.78■□□□□ 0.44
ABCF3-217ENST00000489719 KCTD16Q68DU8 428 aa17.78■□□□□ 0.44
ABCF3-217ENST00000489719 WDR48Q8TAF3 677 aa17.78■□□□□ 0.44
ABCF3-217ENST00000489719 KIAA1524Q8TCG1 905 aa17.78■□□□□ 0.44
ABCF3-217ENST00000489719 SCAMP4Q969E2 229 aa17.78■□□□□ 0.44
ABCF3-217ENST00000489719 LYSMD1Q96S90 227 aa17.78■□□□□ 0.44
ABCF3-217ENST00000489719 CCDC3Q9BQI4 270 aa17.78■□□□□ 0.44
ABCF3-217ENST00000489719 DPEP2Q9H4A9 486 aa17.78■□□□□ 0.44
ABCF3-217ENST00000489719 GLOD4Q9HC38 313 aa17.78■□□□□ 0.44
ABCF3-217ENST00000489719 PKD2L2Q9NZM6 624 aa17.78■□□□□ 0.44
ABCF3-217ENST00000489719 RAXQ9Y2V3 346 aa17.78■□□□□ 0.44
ABCF3-217ENST00000489719 TP53BP1Q12888 1972 aaPredicted RBP17.77■□□□□ 0.44
ABCF3-217ENST00000489719 TDRD6O60522 2096 aaKnown RBP17.77■□□□□ 0.44
ABCF3-217ENST00000489719 RGSL1A5PLK6 1076 aa17.77■□□□□ 0.44
ABCF3-217ENST00000489719 RCCD1A6NED2 376 aa17.77■□□□□ 0.44
ABCF3-217ENST00000489719 CSO75390 466 aaKnown RBP17.77■□□□□ 0.44
ABCF3-217ENST00000489719 CETN2P41208 172 aa17.77■□□□□ 0.44
ABCF3-217ENST00000489719 GNPDA1P46926 289 aa17.77■□□□□ 0.44
ABCF3-217ENST00000489719 CDK18Q07002 472 aa17.77■□□□□ 0.44
ABCF3-217ENST00000489719 ILF3Q12906 894 aaKnown RBP eCLIP17.77■□□□□ 0.44
ABCF3-217ENST00000489719 PCSK7Q16549 785 aa17.77■□□□□ 0.44
ABCF3-217ENST00000489719 PERM1Q5SV97 790 aa17.77■□□□□ 0.44
ABCF3-217ENST00000489719 FAM182AQ5T1J6 154 aa17.77■□□□□ 0.44
ABCF3-217ENST00000489719 OGFOD3Q6PK18 319 aa17.77■□□□□ 0.44
ABCF3-217ENST00000489719 ADAMTSL4Q6UY14 1074 aa17.77■□□□□ 0.44
ABCF3-217ENST00000489719 RAD9BQ6WBX8 426 aa17.77■□□□□ 0.44
ABCF3-217ENST00000489719 KIAA1328Q86T90 577 aa17.77■□□□□ 0.44
ABCF3-217ENST00000489719 ZC3H18Q86VM9 953 aaKnown RBP17.77■□□□□ 0.44
ABCF3-217ENST00000489719 TXLNBQ8N3L3 684 aa17.77■□□□□ 0.44
ABCF3-217ENST00000489719 KYQ8NBH2 561 aa17.77■□□□□ 0.44
ABCF3-217ENST00000489719 GRAMD1AQ96CP6 724 aa17.77■□□□□ 0.44
ABCF3-217ENST00000489719 HIC2Q96JB3 615 aa17.77■□□□□ 0.44
ABCF3-217ENST00000489719 TEKT5Q96M29 485 aa17.77■□□□□ 0.44
ABCF3-217ENST00000489719 RIOK2Q9BVS4 552 aaKnown RBP17.77■□□□□ 0.44
ABCF3-217ENST00000489719 HEMGNQ9BXL5 484 aa17.77■□□□□ 0.44
ABCF3-217ENST00000489719 GSDMCQ9BYG8 508 aa17.77■□□□□ 0.44
ABCF3-217ENST00000489719 FRMD8Q9BZ67 464 aaPredicted RBP17.77■□□□□ 0.44
ABCF3-217ENST00000489719 FAM83DQ9H4H8 585 aa17.77■□□□□ 0.44
ABCF3-217ENST00000489719 TRNAU1APQ9NX07 287 aaKnown RBP17.77■□□□□ 0.44
ABCF3-217ENST00000489719 IMPACTQ9P2X3 320 aa17.77■□□□□ 0.44
ABCF3-217ENST00000489719 PCDHA3Q9Y5H8 950 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms