RNA–Protein interactions for RNA: ENST00000489633.1

NEK2-204, Transcript of NIMA related kinase 2, humanhuman

TSL 2

Gene NEK2, Length 661 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-204ENST00000489633 TMEM57Q8N5G2 664 aa2.87□□□□□ -1.95
NEK2-204ENST00000489633 USP38Q8NB14 1042 aa2.87□□□□□ -1.95
NEK2-204ENST00000489633 MCPH1Q8NEM0 835 aa2.87□□□□□ -1.95
NEK2-204ENST00000489633 C3orf30Q96M34 536 aa2.87□□□□□ -1.95
NEK2-204ENST00000489633 YME1L1Q96TA2 773 aa2.87□□□□□ -1.95
NEK2-204ENST00000489633 MMTAG2Q9BU76 263 aaKnown RBP2.87□□□□□ -1.95
NEK2-204ENST00000489633 TRMT61BQ9BVS5 477 aaKnown RBP2.87□□□□□ -1.95
NEK2-204ENST00000489633 NPLQ9BXD5 320 aaPredicted RBP2.87□□□□□ -1.95
NEK2-204ENST00000489633 C1QTNF1Q9BXJ1 281 aa2.87□□□□□ -1.95
NEK2-204ENST00000489633 EBF2Q9HAK2 575 aa2.87□□□□□ -1.95
NEK2-204ENST00000489633 PLEKHA2Q9HB19 425 aa2.87□□□□□ -1.95
NEK2-204ENST00000489633 NOD2Q9HC29 1040 aa2.87□□□□□ -1.95
NEK2-204ENST00000489633 NOX4Q9NPH5 578 aa2.87□□□□□ -1.95
NEK2-204ENST00000489633 TLR8Q9NR97 1041 aaKnown RBP2.87□□□□□ -1.95
NEK2-204ENST00000489633 ZFP57Q9NU63 452 aa2.87□□□□□ -1.95
NEK2-204ENST00000489633 SMARCAL1Q9NZC9 954 aa2.87□□□□□ -1.95
NEK2-204ENST00000489633 HDAC6Q9UBN7 1215 aa2.87□□□□□ -1.95
NEK2-204ENST00000489633 SLC9A2Q9UBY0 812 aa2.87□□□□□ -1.95
NEK2-204ENST00000489633 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.87□□□□□ -1.95
NEK2-204ENST00000489633 SRP68Q9UHB9 627 aaKnown RBP2.87□□□□□ -1.95
NEK2-204ENST00000489633 KCNS2Q9ULS6 477 aa2.87□□□□□ -1.95
NEK2-204ENST00000489633 TMEM98Q9Y2Y6 226 aa2.87□□□□□ -1.95
NEK2-204ENST00000489633 DERAQ9Y315 318 aa2.87□□□□□ -1.95
NEK2-204ENST00000489633 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.87□□□□□ -1.95
NEK2-204ENST00000489633 ABCA6Q8N139 1617 aa2.86□□□□□ -1.95
NEK2-204ENST00000489633 ZNF292O60281 2723 aa2.86□□□□□ -1.95
NEK2-204ENST00000489633 GPR179Q6PRD1 2367 aa2.86□□□□□ -1.95
NEK2-204ENST00000489633 SERINC4A6NH21 518 aa2.86□□□□□ -1.95
NEK2-204ENST00000489633 FGF17O60258 216 aa2.86□□□□□ -1.95
NEK2-204ENST00000489633 TK1P04183 234 aa2.86□□□□□ -1.95
NEK2-204ENST00000489633 ATP1A1P05023 1023 aaKnown RBP2.86□□□□□ -1.95
NEK2-204ENST00000489633 CSF1P09603 554 aa2.86□□□□□ -1.95
NEK2-204ENST00000489633 LINC00271P0C7V0 271 aa2.86□□□□□ -1.95
NEK2-204ENST00000489633 FGF5P12034 268 aa2.86□□□□□ -1.95
NEK2-204ENST00000489633 PIGAP37287 484 aa2.86□□□□□ -1.95
NEK2-204ENST00000489633 FUT6P51993 359 aa2.86□□□□□ -1.95
NEK2-204ENST00000489633 CLNS1AP54105 237 aaKnown RBP2.86□□□□□ -1.95
NEK2-204ENST00000489633 KRTAP10-3P60369 221 aa2.86□□□□□ -1.95
NEK2-204ENST00000489633 ACTR2P61160 394 aa2.86□□□□□ -1.95
NEK2-204ENST00000489633 ERVK11-1P61568 191 aa2.86□□□□□ -1.95
NEK2-204ENST00000489633 VAMP2P63027 116 aa2.86□□□□□ -1.95
NEK2-204ENST00000489633 PDE1CQ14123 709 aaPredicted RBP2.86□□□□□ -1.95
NEK2-204ENST00000489633 RPE65Q16518 533 aa2.86□□□□□ -1.95
NEK2-204ENST00000489633 CBWD5Q5RIA9 395 aa2.86□□□□□ -1.95
NEK2-204ENST00000489633 WDR78Q5VTH9 848 aa2.86□□□□□ -1.95
NEK2-204ENST00000489633 PLA2G4FQ68DD2 849 aa2.86□□□□□ -1.95
NEK2-204ENST00000489633 SLC26A9Q7LBE3 791 aa2.86□□□□□ -1.95
NEK2-204ENST00000489633 SATL1Q86VE3 508 aa2.86□□□□□ -1.95
NEK2-204ENST00000489633 DENND6AQ8IWF6 608 aa2.86□□□□□ -1.95
NEK2-204ENST00000489633 MYCT1Q8N699 235 aa2.86□□□□□ -1.95
NEK2-204ENST00000489633 ZNF485Q8NCK3 441 aa2.86□□□□□ -1.95
NEK2-204ENST00000489633 SETD9Q8NE22 299 aa2.86□□□□□ -1.95
NEK2-204ENST00000489633 PPHLN1Q8NEY8 458 aaKnown RBP2.86□□□□□ -1.95
NEK2-204ENST00000489633 DBF4BQ8NFT6 615 aa2.86□□□□□ -1.95
NEK2-204ENST00000489633 LRFN5Q96NI6 719 aa2.86□□□□□ -1.95
NEK2-204ENST00000489633 DUX3Q96PT4 197 aa2.86□□□□□ -1.95
NEK2-204ENST00000489633 RASSF1Q9NS23 344 aa2.86□□□□□ -1.95
NEK2-204ENST00000489633 ATP8A2Q9NTI2 1148 aa2.86□□□□□ -1.95
NEK2-204ENST00000489633 ZNF224Q9NZL3 707 aa2.86□□□□□ -1.95
NEK2-204ENST00000489633 FBXO2Q9UK22 296 aaPredicted RBP2.86□□□□□ -1.95
NEK2-204ENST00000489633 CLDN16Q9Y5I7 305 aa2.86□□□□□ -1.95
NEK2-204ENST00000489633 KIF7Q2M1P5 1343 aa2.86□□□□□ -1.95
NEK2-204ENST00000489633 ITIH6Q6UXX5 1313 aa2.86□□□□□ -1.95
NEK2-204ENST00000489633 IGSF1Q8N6C5 1336 aa2.86□□□□□ -1.95
NEK2-204ENST00000489633 PASKQ96RG2 1323 aa2.86□□□□□ -1.95
NEK2-204ENST00000489633 EPG5Q9HCE0 2579 aa2.86□□□□□ -1.95
NEK2-204ENST00000489633 LAMA3Q16787 3333 aa2.86□□□□□ -1.95
NEK2-204ENST00000489633 A0A0G2JPF8 293 aa2.85□□□□□ -1.95
NEK2-204ENST00000489633 A0A1B0GU03 582 aa2.85□□□□□ -1.95
NEK2-204ENST00000489633 A0A1B0GVY2 172 aa2.85□□□□□ -1.95
NEK2-204ENST00000489633 CPED1A4D0V7 1026 aa2.85□□□□□ -1.95
NEK2-204ENST00000489633 HNRNPCL3B7ZW38 293 aa2.85□□□□□ -1.95
NEK2-204ENST00000489633 ZNF587BE7ETH6 402 aa2.85□□□□□ -1.95
NEK2-204ENST00000489633 C16orf97H3BN30 126 aa2.85□□□□□ -1.95
NEK2-204ENST00000489633 IPO5O00410 1097 aaKnown RBP2.85□□□□□ -1.95
NEK2-204ENST00000489633 HSPA12AO43301 675 aa2.85□□□□□ -1.95
NEK2-204ENST00000489633 ANP32CO43423 234 aa2.85□□□□□ -1.95
NEK2-204ENST00000489633 EPB41L2O43491 1005 aaKnown RBP2.85□□□□□ -1.95
NEK2-204ENST00000489633 HNRNPCL1O60812 293 aaKnown RBP2.85□□□□□ -1.95
NEK2-204ENST00000489633 GAGE7O76087 117 aa2.85□□□□□ -1.95
NEK2-204ENST00000489633 GAGE12FP0CL80 117 aa2.85□□□□□ -1.95
NEK2-204ENST00000489633 GAGE12GP0CL81 117 aa2.85□□□□□ -1.95
NEK2-204ENST00000489633 GAGE12IP0CL82 117 aa2.85□□□□□ -1.95
NEK2-204ENST00000489633 HNRNPCL4P0DMR1 293 aa2.85□□□□□ -1.95
NEK2-204ENST00000489633 TFPIP10646 304 aa2.85□□□□□ -1.95
NEK2-204ENST00000489633 CETPP11597 493 aa2.85□□□□□ -1.95
NEK2-204ENST00000489633 LIFRP42702 1097 aa2.85□□□□□ -1.95
NEK2-204ENST00000489633 MAPK9P45984 424 aa2.85□□□□□ -1.95
NEK2-204ENST00000489633 LINC01547P58512 204 aaPredicted RBP2.85□□□□□ -1.95
NEK2-204ENST00000489633 ECT2LQ008S8 904 aa2.85□□□□□ -1.95
NEK2-204ENST00000489633 TBL3Q12788 808 aaKnown RBP2.85□□□□□ -1.95
NEK2-204ENST00000489633 ZNF155Q12901 538 aaPredicted RBP2.85□□□□□ -1.95
NEK2-204ENST00000489633 GAGE1Q13065 139 aa2.85□□□□□ -1.95
NEK2-204ENST00000489633 GAGE4Q13068 117 aa2.85□□□□□ -1.95
NEK2-204ENST00000489633 DDX10Q13206 875 aaKnown RBP2.85□□□□□ -1.95
NEK2-204ENST00000489633 ANKRD1Q15327 319 aa2.85□□□□□ -1.95
NEK2-204ENST00000489633 FCN2Q15485 313 aa2.85□□□□□ -1.95
NEK2-204ENST00000489633 TIGD6Q17RP2 521 aa2.85□□□□□ -1.95
NEK2-204ENST00000489633 FBXO47Q5MNV8 452 aa2.85□□□□□ -1.95
NEK2-204ENST00000489633 INTS11Q5TA45 600 aaKnown RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms