RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 GDF3Q9NR23 364 aa7.85□□□□□ -1.15
SSR1-210ENST00000489567 DNAAF2Q9NVR5 837 aaKnown RBP7.85□□□□□ -1.15
SSR1-210ENST00000489567 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.85□□□□□ -1.15
SSR1-210ENST00000489567 KLF15Q9UIH9 416 aa7.85□□□□□ -1.15
SSR1-210ENST00000489567 TTC7AQ9ULT0 858 aaPredicted RBP7.85□□□□□ -1.15
SSR1-210ENST00000489567 SLC30A4O14863 429 aa7.85□□□□□ -1.15
SSR1-210ENST00000489567 SOD1P00441 154 aa7.85□□□□□ -1.15
SSR1-210ENST00000489567 EPOP01588 193 aa7.85□□□□□ -1.15
SSR1-210ENST00000489567 SLC4A1P02730 911 aa7.85□□□□□ -1.15
SSR1-210ENST00000489567 CD59P13987 128 aa7.85□□□□□ -1.15
SSR1-210ENST00000489567 ZNF30P17039 623 aa7.85□□□□□ -1.15
SSR1-210ENST00000489567 STIP1P31948 543 aaKnown RBP7.85□□□□□ -1.15
SSR1-210ENST00000489567 RABIFP47224 123 aa7.85□□□□□ -1.15
SSR1-210ENST00000489567 GEMP55040 296 aa7.85□□□□□ -1.15
SSR1-210ENST00000489567 ARHGAP8P85298 464 aa7.85□□□□□ -1.15
SSR1-210ENST00000489567 OVGP1Q12889 678 aa7.85□□□□□ -1.15
SSR1-210ENST00000489567 MSLNQ13421 630 aaPredicted RBP7.85□□□□□ -1.15
SSR1-210ENST00000489567 PDE1CQ14123 709 aaPredicted RBP7.85□□□□□ -1.15
SSR1-210ENST00000489567 FZD2Q14332 565 aa7.85□□□□□ -1.15
SSR1-210ENST00000489567 PARP6Q2NL67 630 aa7.85□□□□□ -1.15
SSR1-210ENST00000489567 P3H1Q32P28 736 aa7.85□□□□□ -1.15
SSR1-210ENST00000489567 PAPD7Q5XG87 772 aaKnown RBP7.85□□□□□ -1.15
SSR1-210ENST00000489567 DENND5AQ6IQ26 1287 aa7.85□□□□□ -1.15
SSR1-210ENST00000489567 RANBP10Q6VN20 620 aa7.85□□□□□ -1.15
SSR1-210ENST00000489567 ARHGEF18Q6ZSZ5 1173 aa7.85□□□□□ -1.15
SSR1-210ENST00000489567 NDUFAF2Q8N183 169 aa7.85□□□□□ -1.15
SSR1-210ENST00000489567 ACTRT1Q8TDG2 376 aa7.85□□□□□ -1.15
SSR1-210ENST00000489567 NUS1Q96E22 293 aa7.85□□□□□ -1.15
SSR1-210ENST00000489567 AGAP2Q99490 1192 aa7.85□□□□□ -1.15
SSR1-210ENST00000489567 ELF4Q99607 663 aaPredicted RBP7.85□□□□□ -1.15
SSR1-210ENST00000489567 LGR4Q9BXB1 951 aa7.85□□□□□ -1.15
SSR1-210ENST00000489567 C1QTNF7Q9BXJ2 289 aa7.85□□□□□ -1.15
SSR1-210ENST00000489567 FSD1LQ9BXM9 530 aa7.85□□□□□ -1.15
SSR1-210ENST00000489567 ABCG8Q9H221 673 aa7.85□□□□□ -1.15
SSR1-210ENST00000489567 MAGEE1Q9HCI5 957 aa7.85□□□□□ -1.15
SSR1-210ENST00000489567 TM7SF3Q9NS93 570 aa7.85□□□□□ -1.15
SSR1-210ENST00000489567 DLL3Q9NYJ7 618 aa7.85□□□□□ -1.15
SSR1-210ENST00000489567 CDV3Q9UKY7 258 aaKnown RBP7.85□□□□□ -1.15
SSR1-210ENST00000489567 ZKSCAN5Q9Y2L8 839 aa7.85□□□□□ -1.15
SSR1-210ENST00000489567 ZNF711Q9Y462 761 aa7.85□□□□□ -1.15
SSR1-210ENST00000489567 TP53BP1Q12888 1972 aaPredicted RBP7.84□□□□□ -1.15
SSR1-210ENST00000489567 KNL1Q8NG31 2342 aa7.84□□□□□ -1.15
SSR1-210ENST00000489567 SPTY2D1-AS1A0A0U1RR47 76 aa7.84□□□□□ -1.15
SSR1-210ENST00000489567 A0A1B0GTQ1 180 aa7.84□□□□□ -1.15
SSR1-210ENST00000489567 DCDC2BA2VCK2 349 aa7.84□□□□□ -1.15
SSR1-210ENST00000489567 PSMD11O00231 422 aa7.84□□□□□ -1.15
SSR1-210ENST00000489567 PGRMC1O00264 195 aaKnown RBP7.84□□□□□ -1.15
SSR1-210ENST00000489567 SDC3O75056 442 aa7.84□□□□□ -1.15
SSR1-210ENST00000489567 ANXA9O76027 345 aa7.84□□□□□ -1.15
SSR1-210ENST00000489567 CER1O95813 267 aa7.84□□□□□ -1.15
SSR1-210ENST00000489567 NFKBIAP25963 317 aa7.84□□□□□ -1.15
SSR1-210ENST00000489567 MSNP26038 577 aaKnown RBP7.84□□□□□ -1.15
SSR1-210ENST00000489567 RPL22P35268 128 aaKnown RBP7.84□□□□□ -1.15
SSR1-210ENST00000489567 TRIM23P36406 574 aa7.84□□□□□ -1.15
SSR1-210ENST00000489567 SPINT3P49223 89 aa7.84□□□□□ -1.15
SSR1-210ENST00000489567 BNIP3Q12983 259 aa7.84□□□□□ -1.15
SSR1-210ENST00000489567 EIF2B5Q13144 721 aaKnown RBP7.84□□□□□ -1.15
SSR1-210ENST00000489567 CYP1B1Q16678 543 aa7.84□□□□□ -1.15
SSR1-210ENST00000489567 ESRP1Q6NXG1 681 aaKnown RBP7.84□□□□□ -1.15
SSR1-210ENST00000489567 PNCKQ6P2M8 343 aa7.84□□□□□ -1.15
SSR1-210ENST00000489567 IL27RAQ6UWB1 636 aa7.84□□□□□ -1.15
SSR1-210ENST00000489567 TMC3Q7Z5M5 1100 aa7.84□□□□□ -1.15
SSR1-210ENST00000489567 GATAD2AQ86YP4 633 aa7.84□□□□□ -1.15
SSR1-210ENST00000489567 TTC30BQ8N4P2 665 aa7.84□□□□□ -1.15
SSR1-210ENST00000489567 PDCD7Q8N8D1 485 aaKnown RBP7.84□□□□□ -1.15
SSR1-210ENST00000489567 MAIP1Q8WWC4 291 aa7.84□□□□□ -1.15
SSR1-210ENST00000489567 SKA1Q96BD8 255 aa7.84□□□□□ -1.15
SSR1-210ENST00000489567 CAMK1GQ96NX5 476 aa7.84□□□□□ -1.15
SSR1-210ENST00000489567 NAPGQ99747 312 aaPredicted RBP7.84□□□□□ -1.15
SSR1-210ENST00000489567 APOOQ9BUR5 198 aa7.84□□□□□ -1.15
SSR1-210ENST00000489567 TCEAL2Q9H3H9 227 aaPredicted RBP7.84□□□□□ -1.15
SSR1-210ENST00000489567 ERVMER34-1Q9H9K5 563 aa7.84□□□□□ -1.15
SSR1-210ENST00000489567 ZFYVE1Q9HBF4 777 aa7.84□□□□□ -1.15
SSR1-210ENST00000489567 ETNK1Q9HBU6 452 aa7.84□□□□□ -1.15
SSR1-210ENST00000489567 PIH1D1Q9NWS0 290 aaKnown RBP7.84□□□□□ -1.15
SSR1-210ENST00000489567 DRG1Q9Y295 367 aaKnown RBP7.84□□□□□ -1.15
SSR1-210ENST00000489567 AAR2Q9Y312 384 aaKnown RBP7.84□□□□□ -1.15
SSR1-210ENST00000489567 TMEM202A6NGA9 273 aa7.83□□□□□ -1.16
SSR1-210ENST00000489567 VGLL3A8MV65 326 aa7.83□□□□□ -1.16
SSR1-210ENST00000489567 PDE2AO00408 941 aaPredicted RBP7.83□□□□□ -1.16
SSR1-210ENST00000489567 CES2O00748 559 aa7.83□□□□□ -1.16
SSR1-210ENST00000489567 BUD23O43709 281 aaKnown RBP7.83□□□□□ -1.16
SSR1-210ENST00000489567 MAGEC1O60732 1142 aa7.83□□□□□ -1.16
SSR1-210ENST00000489567 TCP1P17987 556 aaKnown RBP7.83□□□□□ -1.16
SSR1-210ENST00000489567 HLA-DPA1P20036 260 aa7.83□□□□□ -1.16
SSR1-210ENST00000489567 GRIA1P42261 906 aa7.83□□□□□ -1.16
SSR1-210ENST00000489567 MTM1Q13496 603 aa7.83□□□□□ -1.16
SSR1-210ENST00000489567 PRPSAP1Q14558 356 aa7.83□□□□□ -1.16
SSR1-210ENST00000489567 PTPRCAPQ14761 206 aa7.83□□□□□ -1.16
SSR1-210ENST00000489567 DBX2Q6ZNG2 339 aa7.83□□□□□ -1.16
SSR1-210ENST00000489567 MICALCLQ6ZW33 695 aa7.83□□□□□ -1.16
SSR1-210ENST00000489567 KANSL1Q7Z3B3 1105 aa7.83□□□□□ -1.16
SSR1-210ENST00000489567 CREG2Q8IUH2 290 aa7.83□□□□□ -1.16
SSR1-210ENST00000489567 GPR26Q8NDV2 337 aa7.83□□□□□ -1.16
SSR1-210ENST00000489567 BLOC1S5Q8TDH9 187 aa7.83□□□□□ -1.16
SSR1-210ENST00000489567 SAP25Q8TEE9 199 aa7.83□□□□□ -1.16
SSR1-210ENST00000489567 PTCD2Q8WV60 388 aaKnown RBP7.83□□□□□ -1.16
SSR1-210ENST00000489567 MAGOHBQ96A72 148 aaKnown RBP7.83□□□□□ -1.16
SSR1-210ENST00000489567 AP2M1Q96CW1 435 aa7.83□□□□□ -1.16
SSR1-210ENST00000489567 CAPZA3Q96KX2 299 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms