RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 FEM1AQ9BSK4 669 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 MCMBPQ9BTE3 642 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 TDRD1Q9BXT4 1180 aaKnown RBP6.38□□□□□ -1.39
SF3A3-208ENST00000489537 ILKAPQ9H0C8 392 aaPredicted RBP6.38□□□□□ -1.39
SF3A3-208ENST00000489537 MMADHCQ9H3L0 296 aaPredicted RBP6.38□□□□□ -1.39
SF3A3-208ENST00000489537 ATP13A3Q9H7F0 1226 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 PLAC1Q9HBJ0 212 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 MAGEE1Q9HCI5 957 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 SMYD2Q9NRG4 433 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 ABCB8Q9NUT2 735 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 NDFIP2Q9NV92 336 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 DZANK1Q9NVP4 752 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 NLE1Q9NVX2 485 aaPredicted RBP6.38□□□□□ -1.39
SF3A3-208ENST00000489537 TAS2R13Q9NYV9 303 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 UBP1Q9NZI7 540 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 SLC17A7Q9P2U7 560 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 COPG2Q9UBF2 871 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 ZFP69BQ9UJL9 534 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 SLC25A13Q9UJS0 675 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 SLC39A10Q9ULF5 831 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 SLC12A4Q9UP95 1085 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 STK38LQ9Y2H1 464 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 VWA7Q9Y334 891 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 CPQQ9Y646 472 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 TRIOO75962 3097 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 C2orf78A6NCI8 922 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 TRPC5OSA6NMA1 111 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 SYCE1LA8MT33 242 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 ANKRD66B4E2M5 251 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 QSOX1O00391 747 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 GFRA2O00451 464 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 STX7O15400 261 aaKnown RBP6.37□□□□□ -1.39
SF3A3-208ENST00000489537 CD3EAPO15446 510 aaKnown RBP6.37□□□□□ -1.39
SF3A3-208ENST00000489537 SNNO75324 88 aaPredicted RBP6.37□□□□□ -1.39
SF3A3-208ENST00000489537 NDUFS3O75489 264 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 UNC5CO95185 931 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 POP4O95707 220 aaKnown RBP6.37□□□□□ -1.39
SF3A3-208ENST00000489537 KLKB1P03952 638 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 PROCP04070 461 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 ASLP04424 464 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 TPH1P17752 444 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 CR2P20023 1033 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 POU3F3P20264 500 aaPredicted RBP6.37□□□□□ -1.39
SF3A3-208ENST00000489537 CALB2P22676 271 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 ATP5F1P24539 256 aaPredicted RBP6.37□□□□□ -1.39
SF3A3-208ENST00000489537 FOXN2P32314 431 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 SOX11P35716 441 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 HMGCLP35914 325 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 ABL2P42684 1182 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 PTGER3P43115 390 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 RECQLP46063 649 aaPredicted RBP6.37□□□□□ -1.39
SF3A3-208ENST00000489537 SLC1A6P48664 564 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 SUOXP51687 545 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 DNAJB13P59910 316 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 ATP6V0D1P61421 351 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 RPS24P62847 133 aaKnown RBP6.37□□□□□ -1.39
SF3A3-208ENST00000489537 OCRLQ01968 901 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 DSC2Q02487 901 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 BCL2L1Q07817 233 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 BNIP1Q12981 228 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 PRKAA1Q13131 559 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 MTM1Q13496 603 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 ITGA9Q13797 1035 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 BMPR2Q13873 1038 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 SUZ12Q15022 739 aaKnown RBP6.37□□□□□ -1.39
SF3A3-208ENST00000489537 CHI3L2Q15782 390 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 PCSK7Q16549 785 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 MAP7D1Q3KQU3 841 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 GPR33Q49SQ1 333 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 C4orf17Q53FE4 359 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 SIRPB2Q5JXA9 342 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 SH2D4BQ5SQS7 431 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 ARTNQ5T4W7 220 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 LIPMQ5VYY2 423 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 RFWD3Q6PCD5 774 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 ZYG11AQ6WRX3 759 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 FAM47EQ6ZV65 393 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 EFL1Q7Z2Z2 1120 aaKnown RBP6.37□□□□□ -1.39
SF3A3-208ENST00000489537 GLT6D1Q7Z4J2 308 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 CILP2Q8IUL8 1156 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 TP53INP2Q8IXH6 220 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 CBARPQ8N350 705 aaPredicted RBP6.37□□□□□ -1.39
SF3A3-208ENST00000489537 ARL14EPQ8N8R7 260 aaPredicted RBP6.37□□□□□ -1.39
SF3A3-208ENST00000489537 MAB21L3Q8N8X9 362 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 KDM1BQ8NB78 822 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 OR4L1Q8NH43 312 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 RHEBL1Q8TAI7 183 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 DTX3LQ8TDB6 740 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 ADAMTS19Q8TE59 1207 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 ELMO2Q96JJ3 720 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 SCYL1Q96KG9 808 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 CNDP1Q96KN2 507 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 ZNF641Q96N77 438 aaPredicted RBP6.37□□□□□ -1.39
SF3A3-208ENST00000489537 FCRL3Q96P31 734 aaPredicted RBP6.37□□□□□ -1.39
SF3A3-208ENST00000489537 APOL2Q9BQE5 337 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 CPEB1Q9BZB8 566 aaKnown RBP6.37□□□□□ -1.39
SF3A3-208ENST00000489537 RNF38Q9H0F5 515 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 MLXIPLQ9NP71 852 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 CATSPERZQ9NTU4 200 aa6.37□□□□□ -1.39
SF3A3-208ENST00000489537 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms