RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 NDRG1Q92597 394 aaKnown RBP8.29□□□□□ -1.08
TRAPPC12-221ENST00000489032 EXOC4Q96A65 974 aa8.29□□□□□ -1.08
TRAPPC12-221ENST00000489032 SLC22A12Q96S37 553 aa8.29□□□□□ -1.08
TRAPPC12-221ENST00000489032 CPXM1Q96SM3 734 aa8.29□□□□□ -1.08
TRAPPC12-221ENST00000489032 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.29□□□□□ -1.08
TRAPPC12-221ENST00000489032 CDH19Q9H159 772 aa8.29□□□□□ -1.08
TRAPPC12-221ENST00000489032 DEF6Q9H4E7 631 aa8.29□□□□□ -1.08
TRAPPC12-221ENST00000489032 HAUS4Q9H6D7 363 aa8.29□□□□□ -1.08
TRAPPC12-221ENST00000489032 POPDC2Q9HBU9 364 aa8.29□□□□□ -1.08
TRAPPC12-221ENST00000489032 RXFP3Q9NSD7 469 aa8.29□□□□□ -1.08
TRAPPC12-221ENST00000489032 RBM12Q9NTZ6 932 aaKnown RBP8.29□□□□□ -1.08
TRAPPC12-221ENST00000489032 ASNSD1Q9NWL6 643 aa8.29□□□□□ -1.08
TRAPPC12-221ENST00000489032 SMPD4Q9NXE4 827 aa8.29□□□□□ -1.08
TRAPPC12-221ENST00000489032 ADAM22Q9P0K1 906 aa8.29□□□□□ -1.08
TRAPPC12-221ENST00000489032 WDR35Q9P2L0 1181 aa8.29□□□□□ -1.08
TRAPPC12-221ENST00000489032 TBC1D14Q9P2M4 693 aa8.29□□□□□ -1.08
TRAPPC12-221ENST00000489032 CYTH4Q9UIA0 394 aa8.29□□□□□ -1.08
TRAPPC12-221ENST00000489032 ZNF510Q9Y2H8 683 aa8.29□□□□□ -1.08
TRAPPC12-221ENST00000489032 MYO16Q9Y6X6 1858 aa8.29□□□□□ -1.08
TRAPPC12-221ENST00000489032 ADAMTS20P59510 1910 aa8.29□□□□□ -1.08
TRAPPC12-221ENST00000489032 IGF2RP11717 2491 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 NUP210Q8TEM1 1887 aaPredicted RBP8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 A0A1W2PR48 441 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 EIF4E1BA6NMX2 242 aaKnown RBP8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 AKR1B15C9JRZ8 316 aaPredicted RBP8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 PAPSS1O43252 624 aaPredicted RBP8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 TOX4O94842 621 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 TBX18O95935 607 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 ERBB2P04626 1255 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 JUNP05412 331 aaKnown RBP8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 IRF1P10914 325 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 SKILP12757 684 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 DESP17661 470 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 FCARP24071 287 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 GABRB2P47870 512 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 HARS2P49590 506 aaKnown RBP8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 NOVA1P51513 510 aaKnown RBP8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 CCR3P51677 355 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 ADKP55263 362 aaKnown RBP8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 PER3P56645 1201 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 PPP2CBP62714 309 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 PPP2CAP67775 309 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 FCHO2Q0JRZ9 810 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 SF3A2Q15428 464 aaKnown RBP8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 ZNF77Q15935 545 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 FAM102AQ5T9C2 384 aaPredicted RBP8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 ACAD10Q6JQN1 1059 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 FAM183BPQ6ZVS7 135 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 BEND5Q7L4P6 421 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 LRRC8AQ8IWT6 810 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 RAVER1Q8IY67 606 aaKnown RBP8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 ANKRD53Q8N9V6 530 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 PIK3C3Q8NEB9 887 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 SNX33Q8WV41 574 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 OSCP1Q8WVF1 389 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 DNASE1L2Q92874 299 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 RPL10LQ96L21 214 aaKnown RBP8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 SERPINB11Q96P15 392 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 C11orf70Q9BRQ4 267 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 PLA2G2FQ9BZM2 168 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 DCLK3Q9C098 648 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 TCF7L1Q9HCS4 588 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 GKN1Q9NS71 199 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 TMEM51Q9NW97 253 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 OSER1Q9NX31 292 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 DUS2Q9NX74 493 aaKnown RBP8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 RRN3Q9NYV6 651 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 CFAP97Q9P2B7 532 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 PNMA8BQ9ULN7 279 aaPredicted RBP8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 STAP1Q9ULZ2 295 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 CCL26Q9Y258 94 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 HBS1LQ9Y450 684 aaKnown RBP8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 DENND4CQ5VZ89 1909 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 DMXL2Q8TDJ6 3036 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 OBSL1O75147 1896 aa8.28□□□□□ -1.08
TRAPPC12-221ENST00000489032 ANAPC1Q9H1A4 1944 aa8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 TMCO5BA8MYB1 307 aa8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 GOLGA8SH3BPF8 625 aa8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 MDM4O15151 490 aa8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 MFAP3LO75121 409 aa8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 DAB1O75553 588 aa8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 NFATC1O95644 943 aa8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 ZNF806P0C7X5 589 aa8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 GZMAP12544 262 aa8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 UNGP13051 313 aaPredicted RBP8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 MMP8P22894 467 aa8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 CTSSP25774 331 aa8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 ADSLP30566 484 aaPredicted RBP8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 PGFP49763 221 aa8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 RNASE9P60153 205 aaKnown RBP8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 NFYCQ13952 458 aa8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 RNF151Q2KHN1 245 aa8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 DCAF6Q58WW2 860 aa8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 MSANTD2Q6P1R3 559 aa8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 DNAJC24Q6P3W2 148 aa8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 C1orf228Q6PIY5 440 aa8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 MMS22LQ6ZRQ5 1243 aa8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 SLC26A9Q7LBE3 791 aa8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 BHLHA9Q7RTU4 235 aa8.27□□□□□ -1.09
TRAPPC12-221ENST00000489032 ZNF571Q7Z3V5 609 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms