RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 TK2O00142 265 aa22.57■■□□□ 1.2
PTPN4-211ENST00000488279 NOBOXO60393 691 aa22.57■■□□□ 1.2
PTPN4-211ENST00000488279 CEACAM5P06731 702 aa22.57■■□□□ 1.2
PTPN4-211ENST00000488279 PDHA1P08559 390 aa22.57■■□□□ 1.2
PTPN4-211ENST00000488279 CCNCP24863 283 aa22.57■■□□□ 1.2
PTPN4-211ENST00000488279 INHBCP55103 352 aa22.57■■□□□ 1.2
PTPN4-211ENST00000488279 TMPRSS3P57727 454 aa22.57■■□□□ 1.2
PTPN4-211ENST00000488279 CDK3Q00526 305 aa22.57■■□□□ 1.2
PTPN4-211ENST00000488279 DPTQ07507 201 aa22.57■■□□□ 1.2
PTPN4-211ENST00000488279 EIF3IQ13347 325 aaKnown RBP22.57■■□□□ 1.2
PTPN4-211ENST00000488279 HLTFQ14527 1009 aaKnown RBP eCLIP22.57■■□□□ 1.2
PTPN4-211ENST00000488279 PTPRRQ15256 657 aa22.57■■□□□ 1.2
PTPN4-211ENST00000488279 SLC18A3Q16572 532 aa22.57■■□□□ 1.2
PTPN4-211ENST00000488279 SPECC1LQ69YQ0 1117 aa22.57■■□□□ 1.2
PTPN4-211ENST00000488279 RAET1GQ6H3X3 334 aa22.57■■□□□ 1.2
PTPN4-211ENST00000488279 B3GNT8Q7Z7M8 397 aa22.57■■□□□ 1.2
PTPN4-211ENST00000488279 FBXO39Q8N4B4 442 aa22.57■■□□□ 1.2
PTPN4-211ENST00000488279 KIAA1524Q8TCG1 905 aa22.57■■□□□ 1.2
PTPN4-211ENST00000488279 GPBAR1Q8TDU6 330 aa22.57■■□□□ 1.2
PTPN4-211ENST00000488279 MAML1Q92585 1016 aa22.57■■□□□ 1.2
PTPN4-211ENST00000488279 TSGA13Q96PP4 275 aa22.57■■□□□ 1.2
PTPN4-211ENST00000488279 GSDMCQ9BYG8 508 aa22.57■■□□□ 1.2
PTPN4-211ENST00000488279 FOXP3Q9BZS1 431 aa22.57■■□□□ 1.2
PTPN4-211ENST00000488279 EPB41L5Q9HCM4 733 aa22.57■■□□□ 1.2
PTPN4-211ENST00000488279 RBM22Q9NW64 420 aaKnown RBP eCLIP22.57■■□□□ 1.2
PTPN4-211ENST00000488279 AMACRQ9UHK6 382 aa22.57■■□□□ 1.2
PTPN4-211ENST00000488279 ANKRD36A6QL64 1941 aa22.57■■□□□ 1.2
PTPN4-211ENST00000488279 PTPRQQ9UMZ3 2332 aa22.56■■□□□ 1.2
PTPN4-211ENST00000488279 PLD2O14939 933 aa22.56■■□□□ 1.2
PTPN4-211ENST00000488279 ATXN7O15265 892 aaPredicted RBP22.56■■□□□ 1.2
PTPN4-211ENST00000488279 NUDT21O43809 227 aaKnown RBP22.56■■□□□ 1.2
PTPN4-211ENST00000488279 FZD6O60353 706 aa22.56■■□□□ 1.2
PTPN4-211ENST00000488279 ITGA2BP08514 1039 aa22.56■■□□□ 1.2
PTPN4-211ENST00000488279 CCNB1P14635 433 aa22.56■■□□□ 1.2
PTPN4-211ENST00000488279 TEAD1P28347 426 aa22.56■■□□□ 1.2
PTPN4-211ENST00000488279 EPHB1P54762 984 aa22.56■■□□□ 1.2
PTPN4-211ENST00000488279 TAS2R40P59535 323 aa22.56■■□□□ 1.2
PTPN4-211ENST00000488279 ILF3Q12906 894 aaKnown RBP eCLIP22.56■■□□□ 1.2
PTPN4-211ENST00000488279 ZFYVE27Q5T4F4 411 aa22.56■■□□□ 1.2
PTPN4-211ENST00000488279 RAB11FIP2Q7L804 512 aa22.56■■□□□ 1.2
PTPN4-211ENST00000488279 TECPR1Q7Z6L1 1165 aa22.56■■□□□ 1.2
PTPN4-211ENST00000488279 CPNE8Q86YQ8 564 aa22.56■■□□□ 1.2
PTPN4-211ENST00000488279 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.56■■□□□ 1.2
PTPN4-211ENST00000488279 LSM14AQ8ND56 463 aaKnown RBP22.56■■□□□ 1.2
PTPN4-211ENST00000488279 OR8K1Q8NGG5 319 aa22.56■■□□□ 1.2
PTPN4-211ENST00000488279 SLC39A7Q92504 469 aa22.56■■□□□ 1.2
PTPN4-211ENST00000488279 FATE1Q969F0 183 aa22.56■■□□□ 1.2
PTPN4-211ENST00000488279 FRMD8Q9BZ67 464 aaPredicted RBP22.56■■□□□ 1.2
PTPN4-211ENST00000488279 DEF6Q9H4E7 631 aa22.56■■□□□ 1.2
PTPN4-211ENST00000488279 SUDS3Q9H7L9 328 aaPredicted RBP22.56■■□□□ 1.2
PTPN4-211ENST00000488279 TRNAU1APQ9NX07 287 aaKnown RBP22.56■■□□□ 1.2
PTPN4-211ENST00000488279 TTLL3Q9Y4R7 772 aa22.56■■□□□ 1.2
PTPN4-211ENST00000488279 RNF215Q9Y6U7 377 aa22.56■■□□□ 1.2
PTPN4-211ENST00000488279 BAHCC1Q9P281 2608 aa22.56■■□□□ 1.2
PTPN4-211ENST00000488279 FASNP49327 2511 aaKnown RBP22.56■■□□□ 1.2
PTPN4-211ENST00000488279 MAP3K6O95382 1288 aa22.55■■□□□ 1.2
PTPN4-211ENST00000488279 FUCA1P04066 466 aa22.55■■□□□ 1.2
PTPN4-211ENST00000488279 MX2P20592 715 aa22.55■■□□□ 1.2
PTPN4-211ENST00000488279 GPR1P46091 355 aa22.55■■□□□ 1.2
PTPN4-211ENST00000488279 GNPDA1P46926 289 aa22.55■■□□□ 1.2
PTPN4-211ENST00000488279 SKOR1P84550 965 aa22.55■■□□□ 1.2
PTPN4-211ENST00000488279 LRRC66Q68CR7 880 aa22.55■■□□□ 1.2
PTPN4-211ENST00000488279 ALG1LQ6GMV1 187 aa22.55■■□□□ 1.2
PTPN4-211ENST00000488279 CLEC14AQ86T13 490 aa22.55■■□□□ 1.2
PTPN4-211ENST00000488279 SFTPA2Q8IWL1 248 aa22.55■■□□□ 1.2
PTPN4-211ENST00000488279 PACSIN1Q9BY11 444 aa22.55■■□□□ 1.2
PTPN4-211ENST00000488279 CPNE5Q9HCH3 593 aa22.55■■□□□ 1.2
PTPN4-211ENST00000488279 SPATS2LQ9NUQ6 558 aaKnown RBP22.55■■□□□ 1.2
PTPN4-211ENST00000488279 ZNHIT6Q9NWK9 470 aaKnown RBP22.55■■□□□ 1.2
PTPN4-211ENST00000488279 SUFUQ9UMX1 484 aa22.55■■□□□ 1.2
PTPN4-211ENST00000488279 ATMQ13315 3056 aa22.55■■□□□ 1.2
PTPN4-211ENST00000488279 A0A0J9YYE9 177 aa22.54■■□□□ 1.2
PTPN4-211ENST00000488279 CBFA2T2O43439 604 aa22.54■■□□□ 1.2
PTPN4-211ENST00000488279 TRBC1P01850 177 aa22.54■■□□□ 1.2
PTPN4-211ENST00000488279 ZNF30P17039 623 aa22.54■■□□□ 1.2
PTPN4-211ENST00000488279 CA4P22748 312 aa22.54■■□□□ 1.2
PTPN4-211ENST00000488279 CCKBRP32239 447 aa22.54■■□□□ 1.2
PTPN4-211ENST00000488279 DSC2Q02487 901 aa22.54■■□□□ 1.2
PTPN4-211ENST00000488279 PTSQ03393 145 aa22.54■■□□□ 1.2
PTPN4-211ENST00000488279 PEX6Q13608 980 aa22.54■■□□□ 1.2
PTPN4-211ENST00000488279 SPRED1Q7Z699 444 aa22.54■■□□□ 1.2
PTPN4-211ENST00000488279 NLRP8Q86W28 1048 aa22.54■■□□□ 1.2
PTPN4-211ENST00000488279 NRROSQ86YC3 692 aa22.54■■□□□ 1.2
PTPN4-211ENST00000488279 ZDHHC1Q8WTX9 485 aa22.54■■□□□ 1.2
PTPN4-211ENST00000488279 FAF2Q96CS3 445 aa22.54■■□□□ 1.2
PTPN4-211ENST00000488279 AP2M1Q96CW1 435 aa22.54■■□□□ 1.2
PTPN4-211ENST00000488279 CD84Q9UIB8 345 aa22.54■■□□□ 1.2
PTPN4-211ENST00000488279 CHKBQ9Y259 395 aa22.54■■□□□ 1.2
PTPN4-211ENST00000488279 SLC17A4Q9Y2C5 497 aa22.54■■□□□ 1.2
PTPN4-211ENST00000488279 COL27A1Q8IZC6 1860 aaPredicted RBP22.54■■□□□ 1.2
PTPN4-211ENST00000488279 A0A0U1RQS6 177 aa22.53■■□□□ 1.2
PTPN4-211ENST00000488279 AKR1B10O60218 316 aa22.53■■□□□ 1.2
PTPN4-211ENST00000488279 FGF1P05230 155 aa22.53■■□□□ 1.2
PTPN4-211ENST00000488279 MAN1A1P33908 653 aa22.53■■□□□ 1.2
PTPN4-211ENST00000488279 UGT1A5P35504 534 aa22.53■■□□□ 1.2
PTPN4-211ENST00000488279 POLD2P49005 469 aa22.53■■□□□ 1.2
PTPN4-211ENST00000488279 TRIM14Q14142 442 aa22.53■■□□□ 1.2
PTPN4-211ENST00000488279 ASTE1Q2TB18 679 aaPredicted RBP22.53■■□□□ 1.2
PTPN4-211ENST00000488279 ARHGAP40Q5TG30 622 aa22.53■■□□□ 1.2
PTPN4-211ENST00000488279 RFLNAQ6ZTI6 216 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms