RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 PDK2Q15119 407 aa11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 IFI16Q16666 785 aaKnown RBP11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 TSR1Q2NL82 804 aaKnown RBP11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 ASTE1Q2TB18 679 aaPredicted RBP11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 LRRC66Q68CR7 880 aa11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 SPECC1LQ69YQ0 1117 aa11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 USP45Q70EL2 814 aa11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 TRIM74Q86UV6 250 aa11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 MAP7D3Q8IWC1 876 aa11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 GPR156Q8NFN8 814 aa11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 KCNE4Q8WWG9 221 aa11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 SCAMP4Q969E2 229 aa11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 SCRN2Q96FV2 425 aa11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 PRR11Q96HE9 360 aaPredicted RBP11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 POLR1EQ9GZS1 481 aaKnown RBP11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 ABCG8Q9H221 673 aa11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 LRRN3Q9H3W5 708 aa11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 PRORYQ9H606 182 aa11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 THSD1Q9NS62 852 aa11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 SPATS2LQ9NUQ6 558 aaKnown RBP11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 ZNHIT6Q9NWK9 470 aaKnown RBP11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 PLEKHM1Q9Y4G2 1056 aa11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 RNF215Q9Y6U7 377 aa11.29□□□□□ -0.6
NIPAL3-207ENST00000488155 CCDC187A0A096LP49 1063 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 LRRD1A4D1F6 860 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 TNFRSF10CO14798 259 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 MATN3O15232 486 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 NOBOXO60393 691 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 JCHAINP01591 159 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 PRB1P04280 392 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 CEACAM5P06731 702 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 KRT7P08729 469 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 HOXC4P09017 264 aaPredicted RBP11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 TPM1P09493 284 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 TMEM253P0C7T8 217 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 HGFP14210 728 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 CCNB1P14635 433 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 KDELR1P24390 212 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 CCNCP24863 283 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 MAZP56270 477 aaKnown RBP11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 NIPAL4Q0D2K0 466 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 SKOR2Q2VWA4 1001 aaPredicted RBP11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 C14orf28Q4W4Y0 310 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 RALGPS1Q5JS13 557 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 TIGD7Q6NT04 549 aaPredicted RBP11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 SLC30A9Q6PML9 568 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 B4GALNT4Q76KP1 1039 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 MARK2Q7KZI7 788 aaKnown RBP11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 TECPR1Q7Z6L1 1165 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 LRRC49Q8IUZ0 686 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 CCNJLQ8IV13 435 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 NDUFAF2Q8N183 169 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 CBARPQ8N350 705 aaPredicted RBP11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 LPCAT1Q8NF37 534 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 WDR36Q8NI36 951 aaKnown RBP11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 SLC35G2Q8TBE7 412 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 PATE1Q8WXA2 126 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 MAML1Q92585 1016 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 AP2M1Q96CW1 435 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 HIC2Q96JB3 615 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 SLC46A1Q96NT5 459 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 MCCC1Q96RQ3 725 aaPredicted RBP11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 AGAP2Q99490 1192 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 DNAJC7Q99615 494 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 ZNF670Q9BS34 389 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 TEX101Q9BY14 249 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 CEP41Q9BYV8 373 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 TSPY26PQ9H489 355 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 CPNE5Q9HCH3 593 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 LRIT1Q9P2V4 623 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 SUFUQ9UMX1 484 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 TMEM98Q9Y2Y6 226 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 HYOU1Q9Y4L1 999 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 HEY1Q9Y5J3 304 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 PIKFYVEQ9Y2I7 2098 aa11.28□□□□□ -0.6
NIPAL3-207ENST00000488155 TRBV23OR9-2A0A075B6M9 112 aa11.27□□□□□ -0.61
NIPAL3-207ENST00000488155 A0A0J9YYE9 177 aa11.27□□□□□ -0.61
NIPAL3-207ENST00000488155 SSU72P8A0A1W2PR75 194 aa11.27□□□□□ -0.61
NIPAL3-207ENST00000488155 D6RAR5 112 aa11.27□□□□□ -0.61
NIPAL3-207ENST00000488155 KCNK1O00180 336 aa11.27□□□□□ -0.61
NIPAL3-207ENST00000488155 PSMD11O00231 422 aa11.27□□□□□ -0.61
NIPAL3-207ENST00000488155 INPP4BO15327 924 aa11.27□□□□□ -0.61
NIPAL3-207ENST00000488155 FZD6O60353 706 aa11.27□□□□□ -0.61
NIPAL3-207ENST00000488155 DXOO77932 396 aaKnown RBP11.27□□□□□ -0.61
NIPAL3-207ENST00000488155 CLDN7O95471 211 aa11.27□□□□□ -0.61
NIPAL3-207ENST00000488155 PRLP01236 227 aa11.27□□□□□ -0.61
NIPAL3-207ENST00000488155 TRBC1P01850 177 aa11.27□□□□□ -0.61
NIPAL3-207ENST00000488155 INHBCP55103 352 aa11.27□□□□□ -0.61
NIPAL3-207ENST00000488155 ERVPABLB-1P60509 514 aa11.27□□□□□ -0.61
NIPAL3-207ENST00000488155 PTSQ03393 145 aa11.27□□□□□ -0.61
NIPAL3-207ENST00000488155 LLGL1Q15334 1064 aa11.27□□□□□ -0.61
NIPAL3-207ENST00000488155 AMZ1Q400G9 498 aa11.27□□□□□ -0.61
NIPAL3-207ENST00000488155 CERCAMQ5T4B2 595 aa11.27□□□□□ -0.61
NIPAL3-207ENST00000488155 ARHGAP40Q5TG30 622 aa11.27□□□□□ -0.61
NIPAL3-207ENST00000488155 OGFOD3Q6PK18 319 aa11.27□□□□□ -0.61
NIPAL3-207ENST00000488155 NPNTQ6UXI9 565 aa11.27□□□□□ -0.61
NIPAL3-207ENST00000488155 RAB11FIP2Q7L804 512 aa11.27□□□□□ -0.61
NIPAL3-207ENST00000488155 GPR155Q7Z3F1 870 aa11.27□□□□□ -0.61
NIPAL3-207ENST00000488155 NRROSQ86YC3 692 aa11.27□□□□□ -0.61
NIPAL3-207ENST00000488155 JAMLQ86YT9 394 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms