RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 HTR3CQ8WXA8 447 aa13.75□□□□□ -0.21
COPS7B-221ENST00000488111 P2RY11Q96G91 374 aa13.75□□□□□ -0.21
COPS7B-221ENST00000488111 RTKNQ9BST9 563 aa13.75□□□□□ -0.21
COPS7B-221ENST00000488111 OSBPL6Q9BZF3 934 aa13.75□□□□□ -0.21
COPS7B-221ENST00000488111 SHCBP1LQ9BZQ2 653 aa13.75□□□□□ -0.21
COPS7B-221ENST00000488111 NOL6Q9H6R4 1146 aaKnown RBP13.75□□□□□ -0.21
COPS7B-221ENST00000488111 PFDN4Q9NQP4 134 aa13.75□□□□□ -0.21
COPS7B-221ENST00000488111 SMYD2Q9NRG4 433 aa13.75□□□□□ -0.21
COPS7B-221ENST00000488111 DZANK1Q9NVP4 752 aa13.75□□□□□ -0.21
COPS7B-221ENST00000488111 TMEM248Q9NWD8 314 aa13.75□□□□□ -0.21
COPS7B-221ENST00000488111 PRRC2BQ5JSZ5 2229 aaKnown RBP13.75□□□□□ -0.21
COPS7B-221ENST00000488111 SPTBN5Q9NRC6 3674 aaKnown RBP13.74□□□□□ -0.21
COPS7B-221ENST00000488111 WASH4PA8MWX3 477 aa13.74□□□□□ -0.21
COPS7B-221ENST00000488111 F5H423 210 aaPredicted RBP13.74□□□□□ -0.21
COPS7B-221ENST00000488111 SOX1O00570 391 aaPredicted RBP13.74□□□□□ -0.21
COPS7B-221ENST00000488111 CHADO15335 359 aa13.74□□□□□ -0.21
COPS7B-221ENST00000488111 POU2F2P09086 479 aa13.74□□□□□ -0.21
COPS7B-221ENST00000488111 THRAP10827 490 aa13.74□□□□□ -0.21
COPS7B-221ENST00000488111 FGF3P11487 239 aaPredicted RBP13.74□□□□□ -0.21
COPS7B-221ENST00000488111 COX4I1P13073 169 aa13.74□□□□□ -0.21
COPS7B-221ENST00000488111 FUT4P22083 530 aa13.74□□□□□ -0.21
COPS7B-221ENST00000488111 GARSP41250 739 aaKnown RBP13.74□□□□□ -0.21
COPS7B-221ENST00000488111 PFKPQ01813 784 aa13.74□□□□□ -0.21
COPS7B-221ENST00000488111 GALNT2Q10471 571 aa13.74□□□□□ -0.21
COPS7B-221ENST00000488111 PDCD4Q53EL6 469 aaKnown RBP13.74□□□□□ -0.21
COPS7B-221ENST00000488111 SYCP2LQ5T4T6 812 aa13.74□□□□□ -0.21
COPS7B-221ENST00000488111 TPGS1Q6ZTW0 290 aa13.74□□□□□ -0.21
COPS7B-221ENST00000488111 HTR3DQ70Z44 454 aa13.74□□□□□ -0.21
COPS7B-221ENST00000488111 GET4Q7L5D6 327 aaPredicted RBP13.74□□□□□ -0.21
COPS7B-221ENST00000488111 LZTR1Q8N653 840 aa13.74□□□□□ -0.21
COPS7B-221ENST00000488111 ZSCAN18Q8TBC5 510 aaPredicted RBP13.74□□□□□ -0.21
COPS7B-221ENST00000488111 TRPC4APQ8TEL6 797 aa13.74□□□□□ -0.21
COPS7B-221ENST00000488111 VPS50Q96JG6 964 aa13.74□□□□□ -0.21
COPS7B-221ENST00000488111 TRIOBPQ9H2D6 2365 aa13.74□□□□□ -0.21
COPS7B-221ENST00000488111 HMX2A2RU54 273 aa13.74□□□□□ -0.21
COPS7B-221ENST00000488111 ZNF195O14628 629 aa13.74□□□□□ -0.21
COPS7B-221ENST00000488111 UGT1A9O60656 530 aa13.74□□□□□ -0.21
COPS7B-221ENST00000488111 SLC1A6P48664 564 aa13.74□□□□□ -0.21
COPS7B-221ENST00000488111 ADAM15Q13444 863 aa13.74□□□□□ -0.21
COPS7B-221ENST00000488111 PEX6Q13608 980 aa13.74□□□□□ -0.21
COPS7B-221ENST00000488111 FAXCQ5TGI0 409 aa13.74□□□□□ -0.21
COPS7B-221ENST00000488111 TMEM184AQ6ZMB5 413 aa13.74□□□□□ -0.21
COPS7B-221ENST00000488111 TIFABQ6ZNK6 161 aa13.74□□□□□ -0.21
COPS7B-221ENST00000488111 GPR149Q86SP6 731 aa13.74□□□□□ -0.21
COPS7B-221ENST00000488111 ZNF354CQ86Y25 554 aa13.74□□□□□ -0.21
COPS7B-221ENST00000488111 OR52K2Q8NGK3 314 aa13.74□□□□□ -0.21
COPS7B-221ENST00000488111 PPP1R14CQ8TAE6 165 aa13.74□□□□□ -0.21
COPS7B-221ENST00000488111 UGT1A7Q9HAW7 530 aa13.74□□□□□ -0.21
COPS7B-221ENST00000488111 UGT1A10Q9HAW8 530 aa13.74□□□□□ -0.21
COPS7B-221ENST00000488111 UGT1A8Q9HAW9 530 aa13.74□□□□□ -0.21
COPS7B-221ENST00000488111 CLDND1Q9NY35 253 aa13.74□□□□□ -0.21
COPS7B-221ENST00000488111 CLEC1BQ9P126 229 aa13.74□□□□□ -0.21
COPS7B-221ENST00000488111 STOML2Q9UJZ1 356 aa13.74□□□□□ -0.21
COPS7B-221ENST00000488111 PRPF19Q9UMS4 504 aaKnown RBP13.74□□□□□ -0.21
COPS7B-221ENST00000488111 MTCH2Q9Y6C9 303 aa13.74□□□□□ -0.21
COPS7B-221ENST00000488111 HACD1B0YJ81 288 aa13.73□□□□□ -0.21
COPS7B-221ENST00000488111 TBL1XO60907 577 aa13.73□□□□□ -0.21
COPS7B-221ENST00000488111 AVILO75366 819 aa13.73□□□□□ -0.21
COPS7B-221ENST00000488111 SERPINB7O75635 380 aa13.73□□□□□ -0.21
COPS7B-221ENST00000488111 PFKLP17858 780 aa13.73□□□□□ -0.21
COPS7B-221ENST00000488111 MX2P20592 715 aa13.73□□□□□ -0.21
COPS7B-221ENST00000488111 FSHRP23945 695 aa13.73□□□□□ -0.21
COPS7B-221ENST00000488111 STT3AP46977 705 aa13.73□□□□□ -0.21
COPS7B-221ENST00000488111 C5orf22Q49AR2 442 aa13.73□□□□□ -0.21
COPS7B-221ENST00000488111 LPCAT2Q7L5N7 544 aa13.73□□□□□ -0.21
COPS7B-221ENST00000488111 CHERPQ8IWX8 916 aaKnown RBP13.73□□□□□ -0.21
COPS7B-221ENST00000488111 LILRA2Q8N149 483 aa13.73□□□□□ -0.21
COPS7B-221ENST00000488111 TSPAN14Q8NG11 270 aa13.73□□□□□ -0.21
COPS7B-221ENST00000488111 TMA16Q96EY4 203 aaKnown RBP13.73□□□□□ -0.21
COPS7B-221ENST00000488111 HMCESQ96FZ2 354 aa13.73□□□□□ -0.21
COPS7B-221ENST00000488111 LRCH3Q96II8 777 aa13.73□□□□□ -0.21
COPS7B-221ENST00000488111 CCT7Q99832 543 aa13.73□□□□□ -0.21
COPS7B-221ENST00000488111 FRMD8Q9BZ67 464 aaPredicted RBP13.73□□□□□ -0.21
COPS7B-221ENST00000488111 CNOT11Q9UKZ1 510 aaKnown RBP13.73□□□□□ -0.21
COPS7B-221ENST00000488111 HEMK1Q9Y5R4 338 aaPredicted RBP13.73□□□□□ -0.21
COPS7B-221ENST00000488111 DENND4CQ5VZ89 1909 aa13.73□□□□□ -0.21
COPS7B-221ENST00000488111 A0A0D9SEW6 157 aa13.73□□□□□ -0.21
COPS7B-221ENST00000488111 A0A1B0GTW7 788 aa13.73□□□□□ -0.21
COPS7B-221ENST00000488111 E2F6O75461 281 aa13.73□□□□□ -0.21
COPS7B-221ENST00000488111 ACVRL1P37023 503 aa13.73□□□□□ -0.21
COPS7B-221ENST00000488111 VIPR2P41587 438 aa13.73□□□□□ -0.21
COPS7B-221ENST00000488111 ENTPD1P49961 510 aa13.73□□□□□ -0.21
COPS7B-221ENST00000488111 NUP107P57740 925 aa13.73□□□□□ -0.21
COPS7B-221ENST00000488111 PDAP1Q13442 181 aaKnown RBP13.73□□□□□ -0.21
COPS7B-221ENST00000488111 UMODL1-AS1Q8N2C9 162 aa13.73□□□□□ -0.21
COPS7B-221ENST00000488111 PHTF2Q8N3S3 785 aa13.73□□□□□ -0.21
COPS7B-221ENST00000488111 ATPAF2Q8N5M1 289 aa13.73□□□□□ -0.21
COPS7B-221ENST00000488111 USP33Q8TEY7 942 aa13.73□□□□□ -0.21
COPS7B-221ENST00000488111 FGF13Q92913 245 aa13.73□□□□□ -0.21
COPS7B-221ENST00000488111 HDAC11Q96DB2 347 aa13.73□□□□□ -0.21
COPS7B-221ENST00000488111 SORT1Q99523 831 aa13.73□□□□□ -0.21
COPS7B-221ENST00000488111 TRIM56Q9BRZ2 755 aaKnown RBP13.73□□□□□ -0.21
COPS7B-221ENST00000488111 LINC00597Q9H2U6 94 aa13.73□□□□□ -0.21
COPS7B-221ENST00000488111 ZC3H7BQ9UGR2 993 aaKnown RBP13.73□□□□□ -0.21
COPS7B-221ENST00000488111 ITGB1BP2Q9UKP3 347 aa13.73□□□□□ -0.21
COPS7B-221ENST00000488111 NUP205Q92621 2012 aa13.73□□□□□ -0.21
COPS7B-221ENST00000488111 LOC100653049A0A140TA62 436 aa13.72□□□□□ -0.21
COPS7B-221ENST00000488111 PRSS51A0A1B0GVH4 220 aa13.72□□□□□ -0.21
COPS7B-221ENST00000488111 RNF103O00237 685 aa13.72□□□□□ -0.21
COPS7B-221ENST00000488111 NCAM2O15394 837 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms