RNA–Protein interactions for RNA: ENST00000487519.5

TFAM-204, Transcript of transcription factor A, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFAM, Length 5,414 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAM-204ENST00000487519 SMPD1P17405 629 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 BMP7P18075 431 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 ELF3P78545 371 aaPredicted RBP13.96□□□□□ -0.17
TFAM-204ENST00000487519 CYP4F3Q08477 520 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 SMARCB1Q12824 385 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 PPP1R15BQ5SWA1 713 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 RNASEH2BQ5TBB1 312 aaKnown RBP13.96□□□□□ -0.17
TFAM-204ENST00000487519 FUT10Q6P4F1 479 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 CHST9Q7L1S5 443 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 FUKQ8N0W3 1084 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 TNFRSF25Q93038 417 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 ZFRQ96KR1 1074 aaKnown RBP13.96□□□□□ -0.17
TFAM-204ENST00000487519 TTLL2Q9BWV7 592 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 DPEP3Q9H4B8 488 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 CHRAC1Q9NRG0 131 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 SAMHD1Q9Y3Z3 626 aaKnown RBP13.96□□□□□ -0.17
TFAM-204ENST00000487519 SNHG28P0DPA3 235 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 KELP23276 732 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 TNFRSF8P28908 595 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 RABGGTBP53611 331 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 DSC2Q02487 901 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 TMPRSS11BQ86T26 416 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 CIR1Q86X95 450 aaPredicted RBP13.96□□□□□ -0.17
TFAM-204ENST00000487519 MAML3Q96JK9 1138 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 PHPT1Q9NRX4 125 aaPredicted RBP13.96□□□□□ -0.17
TFAM-204ENST00000487519 SLC28A2O43868 658 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 LRCH4O75427 683 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 CST1P01037 141 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 CCNYL3P0C7X3 344 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 MANFP55145 182 aaKnown RBP13.96□□□□□ -0.17
TFAM-204ENST00000487519 LSM3P62310 102 aaKnown RBP13.96□□□□□ -0.17
TFAM-204ENST00000487519 SPIBQ01892 262 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 TNK2Q07912 1038 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 CCNIQ14094 377 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 SPRYD7Q5W111 196 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 HIPK1Q86Z02 1210 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 RDH11Q8TC12 318 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 APOLD1Q96LR9 279 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 FNDC11Q9BVV2 318 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 LMAN2LQ9H0V9 348 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 EQTNQ9NQ60 294 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 TBC1D14Q9P2M4 693 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 CD84Q9UIB8 345 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 TRAF6Q9Y4K3 522 aa13.96□□□□□ -0.17
TFAM-204ENST00000487519 ROBO3Q96MS0 1386 aa13.96□□□□□ -0.18
TFAM-204ENST00000487519 H3BM21 787 aa13.96□□□□□ -0.18
TFAM-204ENST00000487519 TRIM38O00635 465 aa13.96□□□□□ -0.18
TFAM-204ENST00000487519 MAP2K7O14733 419 aa13.96□□□□□ -0.18
TFAM-204ENST00000487519 FAM155BO75949 473 aa13.96□□□□□ -0.18
TFAM-204ENST00000487519 ITGAXP20702 1163 aa13.96□□□□□ -0.18
TFAM-204ENST00000487519 RHAGQ02094 409 aa13.96□□□□□ -0.18
TFAM-204ENST00000487519 PARP15Q460N3 678 aa13.96□□□□□ -0.18
TFAM-204ENST00000487519 FBXO48Q5FWF7 155 aa13.96□□□□□ -0.18
TFAM-204ENST00000487519 TTC23Q5W5X9 447 aa13.96□□□□□ -0.18
TFAM-204ENST00000487519 KLHL17Q6TDP4 642 aa13.96□□□□□ -0.18
TFAM-204ENST00000487519 CUZD1Q86UP6 607 aa13.96□□□□□ -0.18
TFAM-204ENST00000487519 OR7D4Q8NG98 312 aa13.96□□□□□ -0.18
TFAM-204ENST00000487519 OR14C36Q8NHC7 312 aa13.96□□□□□ -0.18
TFAM-204ENST00000487519 RP9Q8TA86 221 aaKnown RBP13.96□□□□□ -0.18
TFAM-204ENST00000487519 ELL3Q9HB65 397 aaPredicted RBP13.96□□□□□ -0.18
TFAM-204ENST00000487519 GSTK1Q9Y2Q3 226 aa13.96□□□□□ -0.18
TFAM-204ENST00000487519 RPP40O75818 363 aaKnown RBP13.95□□□□□ -0.18
TFAM-204ENST00000487519 NUDT17P0C025 328 aa13.95□□□□□ -0.18
TFAM-204ENST00000487519 PKMP14618 531 aaKnown RBP13.95□□□□□ -0.18
TFAM-204ENST00000487519 ITPKBP27987 946 aa13.95□□□□□ -0.18
TFAM-204ENST00000487519 ATAT1Q5SQI0 421 aa13.95□□□□□ -0.18
TFAM-204ENST00000487519 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.95□□□□□ -0.18
TFAM-204ENST00000487519 IRF2BP1Q8IU81 584 aa13.95□□□□□ -0.18
TFAM-204ENST00000487519 CPA6Q8N4T0 437 aa13.95□□□□□ -0.18
TFAM-204ENST00000487519 DCBLD1Q8N8Z6 715 aa13.95□□□□□ -0.18
TFAM-204ENST00000487519 WDR55Q9H6Y2 383 aaPredicted RBP13.95□□□□□ -0.18
TFAM-204ENST00000487519 SGK2Q9HBY8 427 aa13.95□□□□□ -0.18
TFAM-204ENST00000487519 LRRC4CQ9HCJ2 640 aa13.95□□□□□ -0.18
TFAM-204ENST00000487519 REXO2Q9Y3B8 237 aaKnown RBP13.95□□□□□ -0.18
TFAM-204ENST00000487519 PCDHA2Q9Y5H9 948 aa13.95□□□□□ -0.18
TFAM-204ENST00000487519 PDE4DIPQ5VU43 2346 aa13.95□□□□□ -0.18
TFAM-204ENST00000487519 KRT36O76013 467 aa13.95□□□□□ -0.18
TFAM-204ENST00000487519 AQP1P29972 269 aa13.95□□□□□ -0.18
TFAM-204ENST00000487519 MSX2P35548 267 aaPredicted RBP13.95□□□□□ -0.18
TFAM-204ENST00000487519 KCNJ2P63252 427 aa13.95□□□□□ -0.18
TFAM-204ENST00000487519 CAPN13Q6MZZ7 669 aaPredicted RBP13.95□□□□□ -0.18
TFAM-204ENST00000487519 TRIM40Q6P9F5 258 aa13.95□□□□□ -0.18
TFAM-204ENST00000487519 OR4A15Q8NGL6 344 aa13.95□□□□□ -0.18
TFAM-204ENST00000487519 RAD51AP1Q96B01 352 aa13.95□□□□□ -0.18
TFAM-204ENST00000487519 WRAP53Q9BUR4 548 aaKnown RBP13.95□□□□□ -0.18
TFAM-204ENST00000487519 RNPEPL1Q9HAU8 725 aa13.95□□□□□ -0.18
TFAM-204ENST00000487519 SATB2Q9UPW6 733 aa13.95□□□□□ -0.18
TFAM-204ENST00000487519 PCDHGC4Q9Y5F7 938 aa13.95□□□□□ -0.18
TFAM-204ENST00000487519 C5orf60A6NFR6 353 aa13.95□□□□□ -0.18
TFAM-204ENST00000487519 OR2AG2A6NM03 316 aa13.95□□□□□ -0.18
TFAM-204ENST00000487519 SCAMP1O15126 338 aa13.95□□□□□ -0.18
TFAM-204ENST00000487519 BIRC5O15392 142 aa13.95□□□□□ -0.18
TFAM-204ENST00000487519 FFAR2O15552 330 aa13.95□□□□□ -0.18
TFAM-204ENST00000487519 SLC7A2P52569 658 aa13.95□□□□□ -0.18
TFAM-204ENST00000487519 NAA20P61599 178 aa13.95□□□□□ -0.18
TFAM-204ENST00000487519 HECTD2Q5U5R9 776 aa13.95□□□□□ -0.18
TFAM-204ENST00000487519 CHSY3Q70JA7 882 aa13.95□□□□□ -0.18
TFAM-204ENST00000487519 FAM220AQ7Z4H9 259 aa13.95□□□□□ -0.18
TFAM-204ENST00000487519 GPR135Q8IZ08 494 aa13.95□□□□□ -0.18
TFAM-204ENST00000487519 PLD5Q8N7P1 536 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms