RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 PDPK2PQ6A1A2 396 aa14.62□□□□□ -0.07
LIMS3-205ENST00000487150 RAET1GQ6H3X3 334 aa14.62□□□□□ -0.07
LIMS3-205ENST00000487150 PNCKQ6P2M8 343 aa14.62□□□□□ -0.07
LIMS3-205ENST00000487150 Q6ZVL8 140 aa14.62□□□□□ -0.07
LIMS3-205ENST00000487150 GLT6D1Q7Z4J2 308 aa14.62□□□□□ -0.07
LIMS3-205ENST00000487150 HSD11B1LQ7Z5J1 315 aa14.62□□□□□ -0.07
LIMS3-205ENST00000487150 SPATS2Q86XZ4 545 aaKnown RBP14.62□□□□□ -0.07
LIMS3-205ENST00000487150 SLC22A18ASQ8N1D0 253 aa14.62□□□□□ -0.07
LIMS3-205ENST00000487150 GRK7Q8WTQ7 553 aa14.62□□□□□ -0.07
LIMS3-205ENST00000487150 AP2M1Q96CW1 435 aa14.62□□□□□ -0.07
LIMS3-205ENST00000487150 CDC6Q99741 560 aa14.62□□□□□ -0.07
LIMS3-205ENST00000487150 C19orf43Q9BQ61 176 aa14.62□□□□□ -0.07
LIMS3-205ENST00000487150 APOOQ9BUR5 198 aa14.62□□□□□ -0.07
LIMS3-205ENST00000487150 FICDQ9BVA6 458 aa14.62□□□□□ -0.07
LIMS3-205ENST00000487150 C10orf88Q9H8K7 445 aa14.62□□□□□ -0.07
LIMS3-205ENST00000487150 MBNL1Q9NR56 388 aaKnown RBP14.62□□□□□ -0.07
LIMS3-205ENST00000487150 EVA1BQ9NVM1 165 aa14.62□□□□□ -0.07
LIMS3-205ENST00000487150 RNF14Q9UBS8 474 aa14.62□□□□□ -0.07
LIMS3-205ENST00000487150 PKP3Q9Y446 797 aa14.62□□□□□ -0.07
LIMS3-205ENST00000487150 PCDH15Q96QU1 1955 aa14.62□□□□□ -0.07
LIMS3-205ENST00000487150 GON4LQ3T8J9 2241 aa14.61□□□□□ -0.07
LIMS3-205ENST00000487150 TNFRSF10CO14798 259 aa14.61□□□□□ -0.07
LIMS3-205ENST00000487150 RASGRP1O95267 797 aa14.61□□□□□ -0.07
LIMS3-205ENST00000487150 CRTAMO95727 393 aa14.61□□□□□ -0.07
LIMS3-205ENST00000487150 AP2A1O95782 977 aa14.61□□□□□ -0.07
LIMS3-205ENST00000487150 CSF2P04141 144 aa14.61□□□□□ -0.07
LIMS3-205ENST00000487150 C1SP09871 688 aa14.61□□□□□ -0.07
LIMS3-205ENST00000487150 ATXN1LP0C7T5 689 aaKnown RBP14.61□□□□□ -0.07
LIMS3-205ENST00000487150 ALPPL2P10696 532 aa14.61□□□□□ -0.07
LIMS3-205ENST00000487150 HMGCLP35914 325 aa14.61□□□□□ -0.07
LIMS3-205ENST00000487150 TRIM23P36406 574 aa14.61□□□□□ -0.07
LIMS3-205ENST00000487150 GPR1P46091 355 aa14.61□□□□□ -0.07
LIMS3-205ENST00000487150 SPINT3P49223 89 aa14.61□□□□□ -0.07
LIMS3-205ENST00000487150 LMAN1P49257 510 aa14.61□□□□□ -0.07
LIMS3-205ENST00000487150 FNTAP49354 379 aa14.61□□□□□ -0.07
LIMS3-205ENST00000487150 GDF10P55107 478 aa14.61□□□□□ -0.07
LIMS3-205ENST00000487150 SEMG2Q02383 582 aa14.61□□□□□ -0.07
LIMS3-205ENST00000487150 PPARDQ03181 441 aa14.61□□□□□ -0.07
LIMS3-205ENST00000487150 PTSQ03393 145 aa14.61□□□□□ -0.07
LIMS3-205ENST00000487150 SNX1Q13596 522 aa14.61□□□□□ -0.07
LIMS3-205ENST00000487150 LAMB3Q13751 1172 aa14.61□□□□□ -0.07
LIMS3-205ENST00000487150 SIX1Q15475 284 aaPredicted RBP14.61□□□□□ -0.07
LIMS3-205ENST00000487150 SIRPB2Q5JXA9 342 aa14.61□□□□□ -0.07
LIMS3-205ENST00000487150 PAPD7Q5XG87 772 aaKnown RBP14.61□□□□□ -0.07
LIMS3-205ENST00000487150 ADAMTSL4Q6UY14 1074 aa14.61□□□□□ -0.07
LIMS3-205ENST00000487150 LYSMD3Q7Z3D4 306 aa14.61□□□□□ -0.07
LIMS3-205ENST00000487150 TECPR1Q7Z6L1 1165 aa14.61□□□□□ -0.07
LIMS3-205ENST00000487150 NAXDQ8IW45 347 aa14.61□□□□□ -0.07
LIMS3-205ENST00000487150 SDR16C5Q8N3Y7 309 aa14.61□□□□□ -0.07
LIMS3-205ENST00000487150 WDR92Q96MX6 357 aa14.61□□□□□ -0.07
LIMS3-205ENST00000487150 RUNDC3BQ96NL0 473 aa14.61□□□□□ -0.07
LIMS3-205ENST00000487150 PLEKHG4BQ96PX9 1271 aa14.61□□□□□ -0.07
LIMS3-205ENST00000487150 TBL1YQ9BQ87 522 aa14.61□□□□□ -0.07
LIMS3-205ENST00000487150 ZSCAN5AQ9BUG6 496 aa14.61□□□□□ -0.07
LIMS3-205ENST00000487150 SLC13A1Q9BZW2 595 aa14.61□□□□□ -0.07
LIMS3-205ENST00000487150 FAM83DQ9H4H8 585 aa14.61□□□□□ -0.07
LIMS3-205ENST00000487150 ARNT2Q9HBZ2 717 aa14.61□□□□□ -0.07
LIMS3-205ENST00000487150 DNAJC28Q9NX36 388 aa14.61□□□□□ -0.07
LIMS3-205ENST00000487150 KLQ9UEF7 1012 aa14.61□□□□□ -0.07
LIMS3-205ENST00000487150 SAR1BQ9Y6B6 198 aa14.61□□□□□ -0.07
LIMS3-205ENST00000487150 SHROOM3Q8TF72 1996 aa14.6□□□□□ -0.07
LIMS3-205ENST00000487150 C2orf81A6NN90 581 aa14.6□□□□□ -0.07
LIMS3-205ENST00000487150 F5H423 210 aaPredicted RBP14.6□□□□□ -0.07
LIMS3-205ENST00000487150 CLDN7O95471 211 aa14.6□□□□□ -0.07
LIMS3-205ENST00000487150 CEACAM1P13688 526 aa14.6□□□□□ -0.07
LIMS3-205ENST00000487150 ADRA1AP35348 466 aa14.6□□□□□ -0.07
LIMS3-205ENST00000487150 FZD2Q14332 565 aa14.6□□□□□ -0.07
LIMS3-205ENST00000487150 CYP1B1Q16678 543 aa14.6□□□□□ -0.07
LIMS3-205ENST00000487150 HENMT1Q5T8I9 393 aaKnown RBP14.6□□□□□ -0.07
LIMS3-205ENST00000487150 RANBP10Q6VN20 620 aa14.6□□□□□ -0.07
LIMS3-205ENST00000487150 TMC3Q7Z5M5 1100 aa14.6□□□□□ -0.07
LIMS3-205ENST00000487150 HEATR4Q86WZ0 1026 aa14.6□□□□□ -0.07
LIMS3-205ENST00000487150 SLC25A41Q8N5S1 370 aa14.6□□□□□ -0.07
LIMS3-205ENST00000487150 OR56A4Q8NGH8 313 aa14.6□□□□□ -0.07
LIMS3-205ENST00000487150 OR2I1PQ8NGU4 316 aa14.6□□□□□ -0.07
LIMS3-205ENST00000487150 BLOC1S5Q8TDH9 187 aa14.6□□□□□ -0.07
LIMS3-205ENST00000487150 MAGOHBQ96A72 148 aaKnown RBP14.6□□□□□ -0.07
LIMS3-205ENST00000487150 DUSP23Q9BVJ7 150 aa14.6□□□□□ -0.07
LIMS3-205ENST00000487150 TEX101Q9BY14 249 aa14.6□□□□□ -0.07
LIMS3-205ENST00000487150 IL21RQ9HBE5 538 aa14.6□□□□□ -0.07
LIMS3-205ENST00000487150 EIF2B3Q9NR50 452 aaKnown RBP14.6□□□□□ -0.07
LIMS3-205ENST00000487150 RAB6BQ9NRW1 208 aa14.6□□□□□ -0.07
LIMS3-205ENST00000487150 NCKIPSDQ9NZQ3 722 aa14.6□□□□□ -0.07
LIMS3-205ENST00000487150 SPASTQ9UBP0 616 aa14.6□□□□□ -0.07
LIMS3-205ENST00000487150 APOBEC3BQ9UH17 382 aaKnown RBP14.6□□□□□ -0.07
LIMS3-205ENST00000487150 OR1A2Q9Y585 309 aa14.6□□□□□ -0.07
LIMS3-205ENST00000487150 CSNK1G3Q9Y6M4 447 aa14.6□□□□□ -0.07
LIMS3-205ENST00000487150 PHF2O75151 1096 aa14.59□□□□□ -0.07
LIMS3-205ENST00000487150 SLC4A1P02730 911 aa14.59□□□□□ -0.07
LIMS3-205ENST00000487150 CD59P13987 128 aa14.59□□□□□ -0.07
LIMS3-205ENST00000487150 JUNDP17535 347 aa14.59□□□□□ -0.07
LIMS3-205ENST00000487150 GM2AP17900 193 aa14.59□□□□□ -0.07
LIMS3-205ENST00000487150 PAFAH1B1P43034 410 aa14.59□□□□□ -0.07
LIMS3-205ENST00000487150 CDK3Q00526 305 aa14.59□□□□□ -0.07
LIMS3-205ENST00000487150 CDK16Q00536 496 aa14.59□□□□□ -0.07
LIMS3-205ENST00000487150 SEMA5AQ13591 1074 aa14.59□□□□□ -0.07
LIMS3-205ENST00000487150 PEX6Q13608 980 aa14.59□□□□□ -0.07
LIMS3-205ENST00000487150 TAF1AQ15573 450 aaPredicted RBP14.59□□□□□ -0.07
LIMS3-205ENST00000487150 CDKN3Q16667 212 aa14.59□□□□□ -0.07
LIMS3-205ENST00000487150 KCTD11Q693B1 232 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms