RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 C14orf28Q4W4Y0 310 aa24.52■■□□□ 1.52
LIME1-206ENST00000487026 ANKRD20A8PQ5CZ79 823 aa24.52■■□□□ 1.52
LIME1-206ENST00000487026 RAET1GQ6H3X3 334 aa24.52■■□□□ 1.52
LIME1-206ENST00000487026 NRROSQ86YC3 692 aa24.52■■□□□ 1.52
LIME1-206ENST00000487026 FBXO39Q8N4B4 442 aa24.52■■□□□ 1.52
LIME1-206ENST00000487026 LIN37Q96GY3 246 aaPredicted RBP24.52■■□□□ 1.52
LIME1-206ENST00000487026 XPO4Q9C0E2 1151 aaKnown RBP24.52■■□□□ 1.52
LIME1-206ENST00000487026 APPL1Q9UKG1 709 aa24.52■■□□□ 1.52
LIME1-206ENST00000487026 PPIL1Q9Y3C6 166 aa24.52■■□□□ 1.52
LIME1-206ENST00000487026 PLD2O14939 933 aa24.51■■□□□ 1.51
LIME1-206ENST00000487026 PROSCO94903 275 aa24.51■■□□□ 1.51
LIME1-206ENST00000487026 UGT1A5P35504 534 aa24.51■■□□□ 1.51
LIME1-206ENST00000487026 GNPDA1P46926 289 aa24.51■■□□□ 1.51
LIME1-206ENST00000487026 SKOR1P84550 965 aa24.51■■□□□ 1.51
LIME1-206ENST00000487026 CDK3Q00526 305 aa24.51■■□□□ 1.51
LIME1-206ENST00000487026 DSC2Q02487 901 aa24.51■■□□□ 1.51
LIME1-206ENST00000487026 GALNT2Q10471 571 aa24.51■■□□□ 1.51
LIME1-206ENST00000487026 PAFAH1B3Q15102 231 aaKnown RBP24.51■■□□□ 1.51
LIME1-206ENST00000487026 TSR1Q2NL82 804 aaKnown RBP24.51■■□□□ 1.51
LIME1-206ENST00000487026 USP45Q70EL2 814 aa24.51■■□□□ 1.51
LIME1-206ENST00000487026 RAB11FIP2Q7L804 512 aa24.51■■□□□ 1.51
LIME1-206ENST00000487026 TECPR1Q7Z6L1 1165 aa24.51■■□□□ 1.51
LIME1-206ENST00000487026 LRRC49Q8IUZ0 686 aa24.51■■□□□ 1.51
LIME1-206ENST00000487026 GPBAR1Q8TDU6 330 aa24.51■■□□□ 1.51
LIME1-206ENST00000487026 FRMD8Q9BZ67 464 aaPredicted RBP24.51■■□□□ 1.51
LIME1-206ENST00000487026 POLR1EQ9GZS1 481 aaKnown RBP24.51■■□□□ 1.51
LIME1-206ENST00000487026 RBM22Q9NW64 420 aaKnown RBP eCLIP24.51■■□□□ 1.51
LIME1-206ENST00000487026 KCTD5Q9NXV2 234 aa24.51■■□□□ 1.51
LIME1-206ENST00000487026 SUFUQ9UMX1 484 aa24.51■■□□□ 1.51
LIME1-206ENST00000487026 TTLL3Q9Y4R7 772 aa24.51■■□□□ 1.51
LIME1-206ENST00000487026 UNC13CQ8NB66 2214 aa24.51■■□□□ 1.51
LIME1-206ENST00000487026 KALRNO60229 2985 aa24.5■■□□□ 1.51
LIME1-206ENST00000487026 PSMD11O00231 422 aa24.5■■□□□ 1.51
LIME1-206ENST00000487026 MATN3O15232 486 aa24.5■■□□□ 1.51
LIME1-206ENST00000487026 FZD6O60353 706 aa24.5■■□□□ 1.51
LIME1-206ENST00000487026 FGF1P05230 155 aa24.5■■□□□ 1.51
LIME1-206ENST00000487026 CCNB1P14635 433 aa24.5■■□□□ 1.51
LIME1-206ENST00000487026 AK4P27144 223 aaPredicted RBP24.5■■□□□ 1.51
LIME1-206ENST00000487026 UCNP55089 124 aa24.5■■□□□ 1.51
LIME1-206ENST00000487026 MAZP56270 477 aaKnown RBP24.5■■□□□ 1.51
LIME1-206ENST00000487026 DOK6Q6PKX4 331 aa24.5■■□□□ 1.51
LIME1-206ENST00000487026 PCSK4Q6UW60 755 aa24.5■■□□□ 1.51
LIME1-206ENST00000487026 SPRED1Q7Z699 444 aa24.5■■□□□ 1.51
LIME1-206ENST00000487026 STRADBQ9C0K7 418 aa24.5■■□□□ 1.51
LIME1-206ENST00000487026 ABCG8Q9H221 673 aa24.5■■□□□ 1.51
LIME1-206ENST00000487026 WDR70Q9NW82 654 aa24.5■■□□□ 1.51
LIME1-206ENST00000487026 ST14Q9Y5Y6 855 aa24.5■■□□□ 1.51
LIME1-206ENST00000487026 ARHGEF17Q96PE2 2063 aaPredicted RBP24.49■■□□□ 1.51
LIME1-206ENST00000487026 TMX2-CTNND1H3BSU7 103 aa24.49■■□□□ 1.51
LIME1-206ENST00000487026 C1QL1O75973 258 aa24.49■■□□□ 1.51
LIME1-206ENST00000487026 ITGA2BP08514 1039 aa24.49■■□□□ 1.51
LIME1-206ENST00000487026 PTSQ03393 145 aa24.49■■□□□ 1.51
LIME1-206ENST00000487026 LRRC66Q68CR7 880 aa24.49■■□□□ 1.51
LIME1-206ENST00000487026 TMPRSS9Q7Z410 1059 aa24.49■■□□□ 1.51
LIME1-206ENST00000487026 CLEC14AQ86T13 490 aa24.49■■□□□ 1.51
LIME1-206ENST00000487026 MAML1Q92585 1016 aa24.49■■□□□ 1.51
LIME1-206ENST00000487026 SCAMP4Q969E2 229 aa24.49■■□□□ 1.51
LIME1-206ENST00000487026 TMEM74Q96NL1 305 aa24.49■■□□□ 1.51
LIME1-206ENST00000487026 TAAR2Q9P1P5 351 aa24.49■■□□□ 1.51
LIME1-206ENST00000487026 CHKBQ9Y259 395 aa24.49■■□□□ 1.51
LIME1-206ENST00000487026 TMEM98Q9Y2Y6 226 aa24.49■■□□□ 1.51
LIME1-206ENST00000487026 PLEKHM1Q9Y4G2 1056 aa24.49■■□□□ 1.51
LIME1-206ENST00000487026 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.49■■□□□ 1.517e-11■■■■■ 38.8
LIME1-206ENST00000487026 GCN1Q92616 2671 aaKnown RBP24.48■■□□□ 1.51
LIME1-206ENST00000487026 TK2O00142 265 aa24.48■■□□□ 1.51
LIME1-206ENST00000487026 H2AFZP0C0S5 128 aa24.48■■□□□ 1.51
LIME1-206ENST00000487026 PNLIPP16233 465 aa24.48■■□□□ 1.51
LIME1-206ENST00000487026 CCNCP24863 283 aa24.48■■□□□ 1.51
LIME1-206ENST00000487026 SLC5A2P31639 672 aa24.48■■□□□ 1.51
LIME1-206ENST00000487026 HNRNPH3P31942 346 aaKnown RBP24.48■■□□□ 1.51
LIME1-206ENST00000487026 GPR1P46091 355 aa24.48■■□□□ 1.51
LIME1-206ENST00000487026 GBE1Q04446 702 aa24.48■■□□□ 1.51
LIME1-206ENST00000487026 ILF3Q12906 894 aaKnown RBP eCLIP24.48■■□□□ 1.51
LIME1-206ENST00000487026 SLC10A2Q12908 348 aaPredicted RBP24.48■■□□□ 1.51
LIME1-206ENST00000487026 PDK2Q15119 407 aa24.48■■□□□ 1.51
LIME1-206ENST00000487026 IFI16Q16666 785 aaKnown RBP24.48■■□□□ 1.51
LIME1-206ENST00000487026 ZSCAN23Q3MJ62 389 aa24.48■■□□□ 1.51
LIME1-206ENST00000487026 FAM182AQ5T1J6 154 aa24.48■■□□□ 1.51
LIME1-206ENST00000487026 SLC30A9Q6PML9 568 aa24.48■■□□□ 1.51
LIME1-206ENST00000487026 H2AFVQ71UI9 128 aa24.48■■□□□ 1.51
LIME1-206ENST00000487026 JAMLQ86YT9 394 aa24.48■■□□□ 1.51
LIME1-206ENST00000487026 PQLC3Q8N755 202 aa24.48■■□□□ 1.51
LIME1-206ENST00000487026 KIAA1524Q8TCG1 905 aa24.48■■□□□ 1.51
LIME1-206ENST00000487026 ZDHHC1Q8WTX9 485 aa24.48■■□□□ 1.51
LIME1-206ENST00000487026 CTNNBL1Q8WYA6 563 aaPredicted RBP24.48■■□□□ 1.51
LIME1-206ENST00000487026 AP2M1Q96CW1 435 aa24.48■■□□□ 1.51
LIME1-206ENST00000487026 CCDC97Q96F63 343 aaPredicted RBP24.48■■□□□ 1.51
LIME1-206ENST00000487026 ZNF670Q9BS34 389 aa24.48■■□□□ 1.51
LIME1-206ENST00000487026 GSDMCQ9BYG8 508 aa24.48■■□□□ 1.51
LIME1-206ENST00000487026 UVRAGQ9P2Y5 699 aa24.48■■□□□ 1.51
LIME1-206ENST00000487026 SSUH2Q9Y2M2 353 aa24.48■■□□□ 1.51
LIME1-206ENST00000487026 A0A0J9YYE9 177 aa24.47■■□□□ 1.51
LIME1-206ENST00000487026 B4GAT1O43505 415 aa24.47■■□□□ 1.51
LIME1-206ENST00000487026 NUDT21O43809 227 aaKnown RBP24.47■■□□□ 1.51
LIME1-206ENST00000487026 SOD1P00441 154 aa24.47■■□□□ 1.51
LIME1-206ENST00000487026 TRBC1P01850 177 aa24.47■■□□□ 1.51
LIME1-206ENST00000487026 CCKBRP32239 447 aa24.47■■□□□ 1.51
LIME1-206ENST00000487026 MLLT3P42568 568 aaPredicted RBP24.47■■□□□ 1.51
LIME1-206ENST00000487026 EPHB1P54762 984 aa24.47■■□□□ 1.51
LIME1-206ENST00000487026 OR1D5P58170 312 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms