RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 XIAPP98170 497 aa9.56□□□□□ -0.88
MCF2L-227ENST00000486806 FGL2Q14314 439 aa9.56□□□□□ -0.88
MCF2L-227ENST00000486806 PTPRCAPQ14761 206 aa9.56□□□□□ -0.88
MCF2L-227ENST00000486806 AGERQ15109 404 aa9.56□□□□□ -0.88
MCF2L-227ENST00000486806 ZNF284Q2VY69 593 aa9.56□□□□□ -0.88
MCF2L-227ENST00000486806 SPANXN3Q5MJ09 141 aa9.56□□□□□ -0.88
MCF2L-227ENST00000486806 HENMT1Q5T8I9 393 aaKnown RBP9.56□□□□□ -0.88
MCF2L-227ENST00000486806 SEL1L3Q68CR1 1132 aa9.56□□□□□ -0.88
MCF2L-227ENST00000486806 ESRP1Q6NXG1 681 aaKnown RBP9.56□□□□□ -0.88
MCF2L-227ENST00000486806 TSSK4Q6SA08 328 aa9.56□□□□□ -0.88
MCF2L-227ENST00000486806 CES3Q6UWW8 571 aa9.56□□□□□ -0.88
MCF2L-227ENST00000486806 RFLNAQ6ZTI6 216 aa9.56□□□□□ -0.88
MCF2L-227ENST00000486806 ZNF765Q7L2R6 523 aa9.56□□□□□ -0.88
MCF2L-227ENST00000486806 FAM124AQ86V42 546 aa9.56□□□□□ -0.88
MCF2L-227ENST00000486806 WDR5BQ86VZ2 330 aa9.56□□□□□ -0.88
MCF2L-227ENST00000486806 TRIM69Q86WT6 500 aa9.56□□□□□ -0.88
MCF2L-227ENST00000486806 MREGQ8N565 214 aa9.56□□□□□ -0.88
MCF2L-227ENST00000486806 OR2T34Q8NGX1 318 aa9.56□□□□□ -0.88
MCF2L-227ENST00000486806 NELL1Q92832 810 aa9.56□□□□□ -0.88
MCF2L-227ENST00000486806 ZNF669Q96BR6 464 aaPredicted RBP9.56□□□□□ -0.88
MCF2L-227ENST00000486806 DTD2Q96FN9 168 aa9.56□□□□□ -0.88
MCF2L-227ENST00000486806 TOE1Q96GM8 510 aaKnown RBP9.56□□□□□ -0.88
MCF2L-227ENST00000486806 TTC25Q96NG3 672 aa9.56□□□□□ -0.88
MCF2L-227ENST00000486806 PLEKHG4BQ96PX9 1271 aa9.56□□□□□ -0.88
MCF2L-227ENST00000486806 FUT8Q9BYC5 575 aa9.56□□□□□ -0.88
MCF2L-227ENST00000486806 LRRC4CQ9HCJ2 640 aa9.56□□□□□ -0.88
MCF2L-227ENST00000486806 PKD2L2Q9NZM6 624 aa9.56□□□□□ -0.88
MCF2L-227ENST00000486806 FBXO4Q9UKT5 387 aa9.56□□□□□ -0.88
MCF2L-227ENST00000486806 PKP3Q9Y446 797 aa9.56□□□□□ -0.88
MCF2L-227ENST00000486806 RPS6KL1Q9Y6S9 549 aa9.56□□□□□ -0.88
MCF2L-227ENST00000486806 USP34Q70CQ2 3546 aa9.56□□□□□ -0.88
MCF2L-227ENST00000486806 MYLKQ15746 1914 aa9.56□□□□□ -0.88
MCF2L-227ENST00000486806 A0A1W2PQU0 124 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 TCRBV9S1A1TA0A576 114 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 CCDC78A2IDD5 438 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 IGLON5A6NGN9 336 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 LRRC72A6NJI9 287 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 PRR33A8MZF0 331 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 CCL22O00626 93 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 WNT9AO14904 365 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 STX7O15400 261 aaKnown RBP9.55□□□□□ -0.88
MCF2L-227ENST00000486806 RIPK2O43353 540 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 LATO43561 262 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 MMP20O60882 483 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 RNGTTO60942 597 aaKnown RBP9.55□□□□□ -0.88
MCF2L-227ENST00000486806 SPAG6O75602 509 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 RPP40O75818 363 aaKnown RBP9.55□□□□□ -0.88
MCF2L-227ENST00000486806 RECQL5O94762 991 aaPredicted RBP9.55□□□□□ -0.88
MCF2L-227ENST00000486806 SOD1P00441 154 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 POLBP06746 335 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 ABHD2P08910 425 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 GSTA2P09210 222 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 H2AFXP16104 143 aaPredicted RBP9.55□□□□□ -0.88
MCF2L-227ENST00000486806 AVPR2P30518 371 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 SSTR1P30872 391 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 SPAM1P38567 509 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 HADHAP40939 763 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 PMS2P54278 862 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 RPS21P63220 83 aaKnown RBP9.55□□□□□ -0.88
MCF2L-227ENST00000486806 PEX6Q13608 980 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 UAP1Q16222 522 aaPredicted RBP9.55□□□□□ -0.88
MCF2L-227ENST00000486806 SKIDA1Q1XH10 827 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 MAP9Q49MG5 647 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 SPDYCQ5MJ68 293 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 ZDHHC20Q5W0Z9 365 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 ZNF449Q6P9G9 518 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 Q6ZVL8 140 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 MICALCLQ6ZW33 695 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 TRMT10CQ7L0Y3 403 aaKnown RBP9.55□□□□□ -0.88
MCF2L-227ENST00000486806 HORMAD1Q86X24 394 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 NRSN1Q8IZ57 195 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 FAM160A2Q8N612 972 aaPredicted RBP9.55□□□□□ -0.88
MCF2L-227ENST00000486806 FRMD1Q8N878 549 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.55□□□□□ -0.88
MCF2L-227ENST00000486806 GPR26Q8NDV2 337 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 GSDMBQ8TAX9 411 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 DTX3LQ8TDB6 740 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 HNRNPLLQ8WVV9 542 aaKnown RBP9.55□□□□□ -0.88
MCF2L-227ENST00000486806 RLN3Q8WXF3 142 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 ASB12Q8WXK4 309 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 CFAP36Q96G28 342 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 SGSM3Q96HU1 749 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 C1QTNF2Q9BXJ5 285 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 CDH19Q9H159 772 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 SEMA4AQ9H3S1 761 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 BPIFA1Q9NP55 256 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 IL26Q9NPH9 171 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 MOCS1Q9NZB8 636 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 FKBPLQ9UIM3 349 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 MBD1Q9UIS9 605 aaPredicted RBP9.55□□□□□ -0.88
MCF2L-227ENST00000486806 COQ6Q9Y2Z9 468 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.55□□□□□ -0.88
MCF2L-227ENST00000486806 FAM169AQ9Y6X4 670 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 NCOR1O75376 2440 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 SCN8AQ9UQD0 1980 aa9.55□□□□□ -0.88
MCF2L-227ENST00000486806 KMT2EQ8IZD2 1858 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 TBC1D3DA0A087WVF3 549 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 TBC1D3IA0A087WXS9 549 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 TBC1D3EA0A087X179 549 aa9.54□□□□□ -0.88
MCF2L-227ENST00000486806 TBC1D3KA0A087X1G2 549 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms