RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 EXOC8Q8IYI6 725 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 RNF149Q8NC42 400 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 OR7G1Q8NGA0 311 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 OR7A2PQ8NGA2 310 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 DNAJB14Q8TBM8 379 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 SLC35F5Q8WV83 523 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 FAM151AQ8WW52 585 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 PHF21BQ96EK2 531 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 HPDLQ96IR7 371 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 UBXN10Q96LJ8 280 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 ARPC5LQ9BPX5 153 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 CHID1Q9BWS9 393 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 OSBPL10Q9BXB5 764 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 AKTIPQ9H8T0 292 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 RPF1Q9H9Y2 349 aaKnown RBP10.65□□□□□ -0.7
CCDC171-208ENST00000486641 NEK6Q9HC98 313 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 CPNE5Q9HCH3 593 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 PTPRHQ9HD43 1115 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 GIMAP2Q9UG22 337 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 FZD10Q9ULW2 581 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 USP22Q9UPT9 525 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 PDE10AQ9Y233 779 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 CTDP1Q9Y5B0 961 aaPredicted RBP10.65□□□□□ -0.7
CCDC171-208ENST00000486641 PCDHB3Q9Y5E6 796 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 DYTNA2CJ06 578 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 A8MT66 165 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 ANGPT2O15123 496 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 ASNA1O43681 348 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 RFPL2O75678 378 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 KCNK2O95069 426 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 CHRNB1P11230 501 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 CYP2B6P20813 491 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 AGXTP21549 392 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 PCMT1P22061 227 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 CXCR2P25025 360 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 CD40LGP29965 261 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 ALDH3A2P51648 485 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 TAS2R39P59534 338 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 TARBP2Q15633 366 aaKnown RBP10.64□□□□□ -0.71
CCDC171-208ENST00000486641 DGUOKQ16854 277 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 CTU2Q2VPK5 515 aaKnown RBP10.64□□□□□ -0.71
CCDC171-208ENST00000486641 AASDHQ4L235 1098 aaPredicted RBP10.64□□□□□ -0.71
CCDC171-208ENST00000486641 RABL3Q5HYI8 236 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 PRR23BQ6ZRT6 265 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 UTS2BQ765I0 119 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 C8orf59Q8N0T1 100 aaPredicted RBP10.64□□□□□ -0.71
CCDC171-208ENST00000486641 LGI2Q8N0V4 545 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 CHDHQ8NE62 594 aaPredicted RBP10.64□□□□□ -0.71
CCDC171-208ENST00000486641 PSMA8Q8TAA3 256 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 TP53INP1Q96A56 240 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 TMEM125Q96AQ2 219 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 BIRC7Q96CA5 298 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 ELMO2Q96JJ3 720 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 RNF145Q96MT1 663 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 LPIN3Q9BQK8 851 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 BDH2Q9BUT1 245 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 NT5C1AQ9BXI3 368 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 RNF38Q9H0F5 515 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 ALG2Q9H553 416 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 CHST12Q9NRB3 414 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 RNF146Q9NTX7 359 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 UBP1Q9NZI7 540 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 DKK3Q9UBP4 350 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 UBR3Q6ZT12 1888 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 PTGES3LE9PB15 166 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 UPK1AO00322 258 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 HUS1O60921 280 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 CAPN15O75808 1086 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 IPO13O94829 963 aaKnown RBP10.64□□□□□ -0.71
CCDC171-208ENST00000486641 ALPLP05186 524 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 THRBP10828 461 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 UMPSP11172 480 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 VBP1P61758 197 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 COPZ1P61923 177 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 INCA1Q0VD86 236 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 LAMTOR4Q0VGL1 99 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 DAG1Q14118 895 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 CSHL1Q14406 222 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 FUT11Q495W5 492 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.64□□□□□ -0.71
CCDC171-208ENST00000486641 ATF7IP2Q5U623 682 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 ADCK1Q86TW2 530 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 LRRC49Q8IUZ0 686 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 CLEC4FQ8N1N0 589 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 NSUN6Q8TEA1 469 aaKnown RBP10.64□□□□□ -0.71
CCDC171-208ENST00000486641 GLMNQ92990 594 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.64□□□□□ -0.71
CCDC171-208ENST00000486641 VPS33AQ96AX1 596 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 NGLY1Q96IV0 654 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 TMEM39BQ9GZU3 492 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 TOR3AQ9H497 397 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 SP140LQ9H930 580 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 IGSF5Q9NSI5 407 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 NSMCE4AQ9NXX6 385 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 TBC1D14Q9P2M4 693 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 KIAA1257Q9ULG3 409 aa10.64□□□□□ -0.71
CCDC171-208ENST00000486641 YDJCA8MPS7 323 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 ZNF99A8MXY4 864 aaPredicted RBP10.63□□□□□ -0.71
CCDC171-208ENST00000486641 TTC34A8MYJ7 566 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 DYRK3O43781 588 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms