RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 ZBED6P86452 979 aa11.44□□□□□ -0.58
SCFD1-206ENST00000484733 CDK3Q00526 305 aa11.44□□□□□ -0.58
SCFD1-206ENST00000484733 SQSTM1Q13501 440 aa11.44□□□□□ -0.58
SCFD1-206ENST00000484733 ARHGEF7Q14155 803 aa11.44□□□□□ -0.58
SCFD1-206ENST00000484733 TCEA2Q15560 299 aa11.44□□□□□ -0.58
SCFD1-206ENST00000484733 XKR5Q6UX68 686 aa11.44□□□□□ -0.58
SCFD1-206ENST00000484733 USP45Q70EL2 814 aa11.44□□□□□ -0.58
SCFD1-206ENST00000484733 Q8N9G6 341 aaPredicted RBP11.44□□□□□ -0.58
SCFD1-206ENST00000484733 MAML1Q92585 1016 aa11.44□□□□□ -0.58
SCFD1-206ENST00000484733 THAP2Q9H0W7 228 aa11.44□□□□□ -0.58
SCFD1-206ENST00000484733 DPEP2Q9H4A9 486 aa11.44□□□□□ -0.58
SCFD1-206ENST00000484733 CARS2Q9HA77 564 aaKnown RBP11.44□□□□□ -0.58
SCFD1-206ENST00000484733 SPATS2LQ9NUQ6 558 aaKnown RBP11.44□□□□□ -0.58
SCFD1-206ENST00000484733 CAPN11Q9UMQ6 739 aa11.44□□□□□ -0.58
SCFD1-206ENST00000484733 LOXL2Q9Y4K0 774 aa11.44□□□□□ -0.58
SCFD1-206ENST00000484733 FASNP49327 2511 aaKnown RBP11.44□□□□□ -0.58
SCFD1-206ENST00000484733 NPIPB15A6NHN6 443 aaPredicted RBP11.44□□□□□ -0.58
SCFD1-206ENST00000484733 B4DGG1 531 aa11.44□□□□□ -0.58
SCFD1-206ENST00000484733 B4GAT1O43505 415 aa11.44□□□□□ -0.58
SCFD1-206ENST00000484733 PYGLP06737 847 aa11.44□□□□□ -0.58
SCFD1-206ENST00000484733 PLA2G2AP14555 144 aa11.44□□□□□ -0.58
SCFD1-206ENST00000484733 ETV3P41162 512 aa11.44□□□□□ -0.58
SCFD1-206ENST00000484733 GPR3P46089 330 aa11.44□□□□□ -0.58
SCFD1-206ENST00000484733 GALNT2Q10471 571 aa11.44□□□□□ -0.58
SCFD1-206ENST00000484733 ILF3Q12906 894 aaKnown RBP eCLIP11.44□□□□□ -0.58
SCFD1-206ENST00000484733 PAFAH1B3Q15102 231 aaKnown RBP11.44□□□□□ -0.58
SCFD1-206ENST00000484733 HADHQ16836 314 aaKnown RBP11.44□□□□□ -0.58
SCFD1-206ENST00000484733 TDRD12Q587J7 1177 aaKnown RBP11.44□□□□□ -0.58
SCFD1-206ENST00000484733 ADAMTSL4Q6UY14 1074 aa11.44□□□□□ -0.58
SCFD1-206ENST00000484733 ZNF605Q86T29 641 aa11.44□□□□□ -0.58
SCFD1-206ENST00000484733 ZDHHC1Q8WTX9 485 aa11.44□□□□□ -0.58
SCFD1-206ENST00000484733 PDCD6IPQ8WUM4 868 aaKnown RBP11.44□□□□□ -0.58
SCFD1-206ENST00000484733 TSGA13Q96PP4 275 aa11.44□□□□□ -0.58
SCFD1-206ENST00000484733 NUP85Q9BW27 656 aa11.44□□□□□ -0.58
SCFD1-206ENST00000484733 FOXP3Q9BZS1 431 aa11.44□□□□□ -0.58
SCFD1-206ENST00000484733 MOSPD1Q9UJG1 213 aa11.44□□□□□ -0.58
SCFD1-206ENST00000484733 ANAPC7Q9UJX3 599 aa11.44□□□□□ -0.58
SCFD1-206ENST00000484733 DNPEPQ9ULA0 475 aa11.44□□□□□ -0.58
SCFD1-206ENST00000484733 JMJD7P0C870 316 aa11.43□□□□□ -0.58
SCFD1-206ENST00000484733 ZNF30P17039 623 aa11.43□□□□□ -0.58
SCFD1-206ENST00000484733 CD82P27701 267 aa11.43□□□□□ -0.58
SCFD1-206ENST00000484733 MAXP61244 160 aa11.43□□□□□ -0.58
SCFD1-206ENST00000484733 TPM4P67936 248 aa11.43□□□□□ -0.58
SCFD1-206ENST00000484733 FANCCQ00597 558 aa11.43□□□□□ -0.58
SCFD1-206ENST00000484733 KRT81Q14533 505 aa11.43□□□□□ -0.58
SCFD1-206ENST00000484733 TIGD7Q6NT04 549 aaPredicted RBP11.43□□□□□ -0.58
SCFD1-206ENST00000484733 Q6ZVL8 140 aa11.43□□□□□ -0.58
SCFD1-206ENST00000484733 SFTPA2Q8IWL1 248 aa11.43□□□□□ -0.58
SCFD1-206ENST00000484733 NRSN1Q8IZ57 195 aa11.43□□□□□ -0.58
SCFD1-206ENST00000484733 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.43□□□□□ -0.58
SCFD1-206ENST00000484733 ABCG8Q9H221 673 aa11.43□□□□□ -0.58
SCFD1-206ENST00000484733 TAAR2Q9P1P5 351 aa11.43□□□□□ -0.58
SCFD1-206ENST00000484733 LCMT1Q9UIC8 334 aa11.43□□□□□ -0.58
SCFD1-206ENST00000484733 SUFUQ9UMX1 484 aa11.43□□□□□ -0.58
SCFD1-206ENST00000484733 NENFQ9UMX5 172 aa11.43□□□□□ -0.58
SCFD1-206ENST00000484733 MYO1FO00160 1098 aa11.43□□□□□ -0.58
SCFD1-206ENST00000484733 MATN3O15232 486 aa11.43□□□□□ -0.58
SCFD1-206ENST00000484733 EFSO43281 561 aa11.43□□□□□ -0.58
SCFD1-206ENST00000484733 LIPCP11150 499 aa11.43□□□□□ -0.58
SCFD1-206ENST00000484733 CCNCP24863 283 aa11.43□□□□□ -0.58
SCFD1-206ENST00000484733 GARSP41250 739 aaKnown RBP11.43□□□□□ -0.58
SCFD1-206ENST00000484733 RAET1GQ6H3X3 334 aa11.43□□□□□ -0.58
SCFD1-206ENST00000484733 CAVIN1Q6NZI2 390 aaKnown RBP11.43□□□□□ -0.58
SCFD1-206ENST00000484733 TSPAN33Q86UF1 283 aa11.43□□□□□ -0.58
SCFD1-206ENST00000484733 JAMLQ86YT9 394 aa11.43□□□□□ -0.58
SCFD1-206ENST00000484733 BTBD6Q96KE9 485 aa11.43□□□□□ -0.58
SCFD1-206ENST00000484733 CMKLR1Q99788 373 aa11.43□□□□□ -0.58
SCFD1-206ENST00000484733 DPYSL5Q9BPU6 564 aa11.43□□□□□ -0.58
SCFD1-206ENST00000484733 POLR1EQ9GZS1 481 aaKnown RBP11.43□□□□□ -0.58
SCFD1-206ENST00000484733 NT5MQ9NPB1 228 aa11.43□□□□□ -0.58
SCFD1-206ENST00000484733 HAUS2Q9NVX0 235 aa11.43□□□□□ -0.58
SCFD1-206ENST00000484733 PISDQ9UG56 409 aa11.43□□□□□ -0.58
SCFD1-206ENST00000484733 A0A087X0T9 212 aa11.42□□□□□ -0.58
SCFD1-206ENST00000484733 A0A0J9YYE9 177 aa11.42□□□□□ -0.58
SCFD1-206ENST00000484733 RHPN2P1A8MT19 583 aa11.42□□□□□ -0.58
SCFD1-206ENST00000484733 HGSO14964 777 aaPredicted RBP11.42□□□□□ -0.58
SCFD1-206ENST00000484733 CPNE6O95741 557 aa11.42□□□□□ -0.58
SCFD1-206ENST00000484733 SOD1P00441 154 aa11.42□□□□□ -0.58
SCFD1-206ENST00000484733 TRBC1P01850 177 aa11.42□□□□□ -0.58
SCFD1-206ENST00000484733 FAM228BP0C875 321 aa11.42□□□□□ -0.58
SCFD1-206ENST00000484733 HGFP14210 728 aa11.42□□□□□ -0.58
SCFD1-206ENST00000484733 ADCY8P40145 1251 aa11.42□□□□□ -0.58
SCFD1-206ENST00000484733 GPR1P46091 355 aa11.42□□□□□ -0.58
SCFD1-206ENST00000484733 GNPDA1P46926 289 aa11.42□□□□□ -0.58
SCFD1-206ENST00000484733 MAZP56270 477 aaKnown RBP11.42□□□□□ -0.58
SCFD1-206ENST00000484733 RPL26P61254 145 aaKnown RBP11.42□□□□□ -0.58
SCFD1-206ENST00000484733 TRA2AQ13595 282 aaKnown RBP eCLIP11.42□□□□□ -0.58
SCFD1-206ENST00000484733 PDK2Q15119 407 aa11.42□□□□□ -0.58
SCFD1-206ENST00000484733 IFI16Q16666 785 aaKnown RBP11.42□□□□□ -0.58
SCFD1-206ENST00000484733 ZSCAN23Q3MJ62 389 aa11.42□□□□□ -0.58
SCFD1-206ENST00000484733 DENND2CQ68D51 928 aa11.42□□□□□ -0.58
SCFD1-206ENST00000484733 NCBP2-AS2Q69YL0 99 aa11.42□□□□□ -0.58
SCFD1-206ENST00000484733 ALKBH5Q6P6C2 394 aaKnown RBP11.42□□□□□ -0.58
SCFD1-206ENST00000484733 TMPRSS9Q7Z410 1059 aa11.42□□□□□ -0.58
SCFD1-206ENST00000484733 PIM3Q86V86 326 aa11.42□□□□□ -0.58
SCFD1-206ENST00000484733 MED8Q96G25 268 aa11.42□□□□□ -0.58
SCFD1-206ENST00000484733 SEMA3CQ99985 751 aa11.42□□□□□ -0.58
SCFD1-206ENST00000484733 ZNF670Q9BS34 389 aa11.42□□□□□ -0.58
SCFD1-206ENST00000484733 CBX8Q9HC52 389 aa11.42□□□□□ -0.58
SCFD1-206ENST00000484733 RPL26L1Q9UNX3 145 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms