RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 KRT35Q92764 455 aa4.89□□□□□ -1.63
SSBP1-211ENST00000484178 MCUR1Q96AQ8 359 aa4.89□□□□□ -1.63
SSBP1-211ENST00000484178 LRRC39Q96DD0 335 aa4.89□□□□□ -1.63
SSBP1-211ENST00000484178 MTFMTQ96DP5 389 aaKnown RBP4.89□□□□□ -1.63
SSBP1-211ENST00000484178 NSL1Q96IY1 281 aa4.89□□□□□ -1.63
SSBP1-211ENST00000484178 NUDCD1Q96RS6 583 aa4.89□□□□□ -1.63
SSBP1-211ENST00000484178 RMDN3Q96TC7 470 aa4.89□□□□□ -1.63
SSBP1-211ENST00000484178 TSC22D3Q99576 134 aa4.89□□□□□ -1.63
SSBP1-211ENST00000484178 ADAM2Q99965 735 aa4.89□□□□□ -1.63
SSBP1-211ENST00000484178 LXNQ9BS40 222 aa4.89□□□□□ -1.63
SSBP1-211ENST00000484178 BTBD10Q9BSF8 475 aa4.89□□□□□ -1.63
SSBP1-211ENST00000484178 TMEM117Q9H0C3 514 aa4.89□□□□□ -1.63
SSBP1-211ENST00000484178 MAGEH1Q9H213 219 aa4.89□□□□□ -1.63
SSBP1-211ENST00000484178 C1orf21Q9H246 121 aa4.89□□□□□ -1.63
SSBP1-211ENST00000484178 RANBP17Q9H2T7 1088 aaKnown RBP4.89□□□□□ -1.63
SSBP1-211ENST00000484178 CPVLQ9H3G5 476 aa4.89□□□□□ -1.63
SSBP1-211ENST00000484178 TRABDQ9H4I3 376 aa4.89□□□□□ -1.63
SSBP1-211ENST00000484178 ERVK-5Q9HDB9 667 aa4.89□□□□□ -1.63
SSBP1-211ENST00000484178 ITM2CQ9NQX7 267 aa4.89□□□□□ -1.63
SSBP1-211ENST00000484178 TMOD4Q9NZQ9 345 aa4.89□□□□□ -1.63
SSBP1-211ENST00000484178 TMOD2Q9NZR1 351 aa4.89□□□□□ -1.63
SSBP1-211ENST00000484178 WDR35Q9P2L0 1181 aa4.89□□□□□ -1.63
SSBP1-211ENST00000484178 STX18Q9P2W9 335 aaKnown RBP4.89□□□□□ -1.63
SSBP1-211ENST00000484178 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.89□□□□□ -1.63
SSBP1-211ENST00000484178 ANAPC7Q9UJX3 599 aa4.89□□□□□ -1.63
SSBP1-211ENST00000484178 OGDHLQ9ULD0 1010 aa4.89□□□□□ -1.63
SSBP1-211ENST00000484178 CNTN6Q9UQ52 1028 aa4.89□□□□□ -1.63
SSBP1-211ENST00000484178 CRYL1Q9Y2S2 319 aa4.89□□□□□ -1.63
SSBP1-211ENST00000484178 SLC45A1Q9Y2W3 748 aa4.89□□□□□ -1.63
SSBP1-211ENST00000484178 IKBKGQ9Y6K9 419 aa4.89□□□□□ -1.63
SSBP1-211ENST00000484178 IGSF9BQ9UPX0 1349 aa4.89□□□□□ -1.63
SSBP1-211ENST00000484178 A0A1W2PPL8 197 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 SMIM23A6NLE4 172 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 E7ESA3 106 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 I3L4J1 428 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 EIF3FO00303 357 aaPredicted RBP4.88□□□□□ -1.63
SSBP1-211ENST00000484178 TRDMT1O14717 391 aaKnown RBP4.88□□□□□ -1.63
SSBP1-211ENST00000484178 BIRC5O15392 142 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 CLDN3O15551 220 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 SGTAO43765 313 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 LIASO43766 372 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 EXTL3O43909 919 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 TYROBPO43914 113 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 HAUS5O94927 633 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 GASTP01350 101 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 RPSAP08865 295 aaKnown RBP4.88□□□□□ -1.63
SSBP1-211ENST00000484178 LTA4HP09960 611 aaKnown RBP4.88□□□□□ -1.63
SSBP1-211ENST00000484178 HARSP12081 509 aaKnown RBP4.88□□□□□ -1.63
SSBP1-211ENST00000484178 CHRNB2P17787 502 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 CA4P22748 312 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 KLRC2P26717 231 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 STIP1P31948 543 aaKnown RBP4.88□□□□□ -1.63
SSBP1-211ENST00000484178 SLC16A2P36021 539 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 SLCO1A2P46721 670 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 PAPOLAP51003 745 aaKnown RBP4.88□□□□□ -1.63
SSBP1-211ENST00000484178 HSD17B4P51659 736 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 RAP1GDS1P52306 607 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 RAD23BP54727 409 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 VCPP55072 806 aaKnown RBP4.88□□□□□ -1.63
SSBP1-211ENST00000484178 KCNJ2P63252 427 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 MXRA7P84157 204 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 DEUP1Q05D60 604 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 SLC34A1Q06495 639 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 AP1B1Q10567 949 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 NAB1Q13506 487 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 PRKG1Q13976 671 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 PDE1CQ14123 709 aaPredicted RBP4.88□□□□□ -1.63
SSBP1-211ENST00000484178 PSMD6Q15008 389 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 TOMM20Q15388 145 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 KYNUQ16719 465 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 HADHQ16836 314 aaKnown RBP4.88□□□□□ -1.63
SSBP1-211ENST00000484178 ZACNQ401N2 412 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 PDCD4Q53EL6 469 aaKnown RBP4.88□□□□□ -1.63
SSBP1-211ENST00000484178 APOBEC3HQ6NTF7 200 aaKnown RBP4.88□□□□□ -1.63
SSBP1-211ENST00000484178 ZNF449Q6P9G9 518 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 GJB7Q6PEY0 223 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 C16orf54Q6UWD8 224 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 CYS1Q717R9 158 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 NET1Q7Z628 596 aaPredicted RBP4.88□□□□□ -1.63
SSBP1-211ENST00000484178 GLCCI1Q86VQ1 547 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 ECHDC2Q86YB7 292 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 TMEM126BQ8IUX1 230 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 SRRM1Q8IYB3 904 aaKnown RBP4.88□□□□□ -1.63
SSBP1-211ENST00000484178 COLGALT2Q8IYK4 626 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 PDIK1LQ8N165 341 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 VPS52Q8N1B4 723 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 GPD1LQ8N335 351 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 ALLCQ8N6M5 410 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.88□□□□□ -1.63
SSBP1-211ENST00000484178 STKLD1Q8NE28 680 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 CCDC110Q8TBZ0 833 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 LPAR1Q92633 364 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 ATP6V0A1Q93050 837 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 FUBP1Q96AE4 644 aaKnown RBP4.88□□□□□ -1.63
SSBP1-211ENST00000484178 PPP1R14BQ96C90 147 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 THOC1Q96FV9 657 aaKnown RBP4.88□□□□□ -1.63
SSBP1-211ENST00000484178 SLC35A4Q96G79 324 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 FAM167AQ96KS9 214 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 C7orf26Q96N11 449 aa4.88□□□□□ -1.63
SSBP1-211ENST00000484178 FAM210AQ96ND0 272 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms