RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 PDE2AO00408 941 aaPredicted RBP18.53■□□□□ 0.56
CLK1-211ENST00000481641 FZD6O60353 706 aa18.53■□□□□ 0.56
CLK1-211ENST00000481641 GLB1P16278 677 aa18.53■□□□□ 0.56
CLK1-211ENST00000481641 AK4P27144 223 aaPredicted RBP18.53■□□□□ 0.56
CLK1-211ENST00000481641 GNPDA1P46926 289 aa18.53■□□□□ 0.56
CLK1-211ENST00000481641 MAZP56270 477 aaKnown RBP18.53■□□□□ 0.56
CLK1-211ENST00000481641 CDK3Q00526 305 aa18.53■□□□□ 0.56
CLK1-211ENST00000481641 HLTFQ14527 1009 aaKnown RBP eCLIP18.53■□□□□ 0.56
CLK1-211ENST00000481641 C14orf28Q4W4Y0 310 aa18.53■□□□□ 0.56
CLK1-211ENST00000481641 BROXQ5VW32 411 aa18.53■□□□□ 0.56
CLK1-211ENST00000481641 LRRC66Q68CR7 880 aa18.53■□□□□ 0.56
CLK1-211ENST00000481641 DOK6Q6PKX4 331 aa18.53■□□□□ 0.56
CLK1-211ENST00000481641 USP45Q70EL2 814 aa18.53■□□□□ 0.56
CLK1-211ENST00000481641 TECPR1Q7Z6L1 1165 aa18.53■□□□□ 0.56
CLK1-211ENST00000481641 PQLC3Q8N755 202 aa18.53■□□□□ 0.56
CLK1-211ENST00000481641 OR6C4Q8NGE1 309 aa18.53■□□□□ 0.56
CLK1-211ENST00000481641 SLC39A7Q92504 469 aa18.53■□□□□ 0.56
CLK1-211ENST00000481641 MAML1Q92585 1016 aa18.53■□□□□ 0.56
CLK1-211ENST00000481641 LIN37Q96GY3 246 aaPredicted RBP18.53■□□□□ 0.56
CLK1-211ENST00000481641 FRMD8Q9BZ67 464 aaPredicted RBP18.53■□□□□ 0.56
CLK1-211ENST00000481641 RBM22Q9NW64 420 aaKnown RBP eCLIP18.53■□□□□ 0.562e-10■■■■■ 47.5
CLK1-211ENST00000481641 LRIT1Q9P2V4 623 aa18.53■□□□□ 0.56
CLK1-211ENST00000481641 SUFUQ9UMX1 484 aa18.53■□□□□ 0.56
CLK1-211ENST00000481641 CHKBQ9Y259 395 aa18.53■□□□□ 0.56
CLK1-211ENST00000481641 PPIL1Q9Y3C6 166 aa18.53■□□□□ 0.56
CLK1-211ENST00000481641 PLEKHM1Q9Y4G2 1056 aa18.53■□□□□ 0.56
CLK1-211ENST00000481641 ST14Q9Y5Y6 855 aa18.53■□□□□ 0.56
CLK1-211ENST00000481641 PSMD11O00231 422 aa18.52■□□□□ 0.56
CLK1-211ENST00000481641 MATN3O15232 486 aa18.52■□□□□ 0.56
CLK1-211ENST00000481641 ATXN7O15265 892 aaPredicted RBP18.52■□□□□ 0.56
CLK1-211ENST00000481641 H2AFZP0C0S5 128 aa18.52■□□□□ 0.56
CLK1-211ENST00000481641 CCNB1P14635 433 aa18.52■□□□□ 0.56
CLK1-211ENST00000481641 NFKBIAP25963 317 aa18.52■□□□□ 0.56
CLK1-211ENST00000481641 HNRNPH3P31942 346 aaKnown RBP18.52■□□□□ 0.56
CLK1-211ENST00000481641 INHBCP55103 352 aa18.52■□□□□ 0.56
CLK1-211ENST00000481641 SKOR1P84550 965 aa18.52■□□□□ 0.56
CLK1-211ENST00000481641 PTSQ03393 145 aa18.52■□□□□ 0.56
CLK1-211ENST00000481641 GBE1Q04446 702 aa18.52■□□□□ 0.56
CLK1-211ENST00000481641 NIPAL4Q0D2K0 466 aa18.52■□□□□ 0.56
CLK1-211ENST00000481641 SLC10A2Q12908 348 aaPredicted RBP18.52■□□□□ 0.56
CLK1-211ENST00000481641 PCSK4Q6UW60 755 aa18.52■□□□□ 0.56
CLK1-211ENST00000481641 H2AFVQ71UI9 128 aa18.52■□□□□ 0.56
CLK1-211ENST00000481641 RAB11FIP2Q7L804 512 aa18.52■□□□□ 0.56
CLK1-211ENST00000481641 TMPRSS9Q7Z410 1059 aa18.52■□□□□ 0.56
CLK1-211ENST00000481641 LRRC49Q8IUZ0 686 aa18.52■□□□□ 0.56
CLK1-211ENST00000481641 FBXO39Q8N4B4 442 aa18.52■□□□□ 0.56
CLK1-211ENST00000481641 ARL14Q8N4G2 192 aa18.52■□□□□ 0.56
CLK1-211ENST00000481641 GPBAR1Q8TDU6 330 aa18.52■□□□□ 0.56
CLK1-211ENST00000481641 SCAMP4Q969E2 229 aa18.52■□□□□ 0.56
CLK1-211ENST00000481641 POLR1EQ9GZS1 481 aaKnown RBP18.52■□□□□ 0.56
CLK1-211ENST00000481641 ABCG8Q9H221 673 aa18.52■□□□□ 0.56
CLK1-211ENST00000481641 APPL1Q9UKG1 709 aa18.52■□□□□ 0.56
CLK1-211ENST00000481641 TMEM98Q9Y2Y6 226 aa18.52■□□□□ 0.56
CLK1-211ENST00000481641 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.52■□□□□ 0.562e-27■■■■■ 27.1
CLK1-211ENST00000481641 TEX51A0A1B0GUA7 166 aa18.51■□□□□ 0.55
CLK1-211ENST00000481641 PLD2O14939 933 aa18.51■□□□□ 0.55
CLK1-211ENST00000481641 SOD1P00441 154 aa18.51■□□□□ 0.55
CLK1-211ENST00000481641 FGF1P05230 155 aa18.51■□□□□ 0.55
CLK1-211ENST00000481641 HLA-DQB2P05538 268 aa18.51■□□□□ 0.55
CLK1-211ENST00000481641 UGT1A5P35504 534 aa18.51■□□□□ 0.55
CLK1-211ENST00000481641 GPR1P46091 355 aa18.51■□□□□ 0.55
CLK1-211ENST00000481641 TMPRSS3P57727 454 aa18.51■□□□□ 0.55
CLK1-211ENST00000481641 PDK2Q15119 407 aa18.51■□□□□ 0.55
CLK1-211ENST00000481641 SLC18A3Q16572 532 aa18.51■□□□□ 0.55
CLK1-211ENST00000481641 IFI16Q16666 785 aaKnown RBP18.51■□□□□ 0.55
CLK1-211ENST00000481641 TSR1Q2NL82 804 aaKnown RBP18.51■□□□□ 0.55
CLK1-211ENST00000481641 ASTE1Q2TB18 679 aaPredicted RBP18.51■□□□□ 0.55
CLK1-211ENST00000481641 ZFYVE27Q5T4F4 411 aa18.51■□□□□ 0.55
CLK1-211ENST00000481641 SLC30A9Q6PML9 568 aa18.51■□□□□ 0.55
CLK1-211ENST00000481641 SPRED1Q7Z699 444 aa18.51■□□□□ 0.55
CLK1-211ENST00000481641 TRIM74Q86UV6 250 aa18.51■□□□□ 0.55
CLK1-211ENST00000481641 ARRDC2Q8TBH0 407 aa18.51■□□□□ 0.55
CLK1-211ENST00000481641 ZDHHC1Q8WTX9 485 aa18.51■□□□□ 0.55
CLK1-211ENST00000481641 PATE1Q8WXA2 126 aa18.51■□□□□ 0.55
CLK1-211ENST00000481641 CTNNBL1Q8WYA6 563 aaPredicted RBP18.51■□□□□ 0.55
CLK1-211ENST00000481641 RAPGEF5Q92565 580 aa18.51■□□□□ 0.55
CLK1-211ENST00000481641 AGAP2Q99490 1192 aa18.51■□□□□ 0.55
CLK1-211ENST00000481641 ZNF670Q9BS34 389 aa18.51■□□□□ 0.55
CLK1-211ENST00000481641 DPH1Q9BZG8 443 aa18.51■□□□□ 0.55
CLK1-211ENST00000481641 KCTD5Q9NXV2 234 aa18.51■□□□□ 0.55
CLK1-211ENST00000481641 TAAR2Q9P1P5 351 aa18.51■□□□□ 0.55
CLK1-211ENST00000481641 UVRAGQ9P2Y5 699 aa18.51■□□□□ 0.55
CLK1-211ENST00000481641 A0A0J9YYE9 177 aa18.5■□□□□ 0.55
CLK1-211ENST00000481641 B4GAT1O43505 415 aa18.5■□□□□ 0.55
CLK1-211ENST00000481641 C1QL1O75973 258 aa18.5■□□□□ 0.55
CLK1-211ENST00000481641 PRLP01236 227 aa18.5■□□□□ 0.55
CLK1-211ENST00000481641 TRBC1P01850 177 aa18.5■□□□□ 0.55
CLK1-211ENST00000481641 ITGA2BP08514 1039 aa18.5■□□□□ 0.55
CLK1-211ENST00000481641 CCNCP24863 283 aa18.5■□□□□ 0.55
CLK1-211ENST00000481641 EPHB1P54762 984 aa18.5■□□□□ 0.55
CLK1-211ENST00000481641 CTBSQ01459 385 aa18.5■□□□□ 0.55
CLK1-211ENST00000481641 ILF3Q12906 894 aaKnown RBP eCLIP18.5■□□□□ 0.55
CLK1-211ENST00000481641 MESDQ14696 234 aa18.5■□□□□ 0.55
CLK1-211ENST00000481641 TIGD7Q6NT04 549 aaPredicted RBP18.5■□□□□ 0.55
CLK1-211ENST00000481641 CLEC14AQ86T13 490 aa18.5■□□□□ 0.55
CLK1-211ENST00000481641 JAMLQ86YT9 394 aa18.5■□□□□ 0.55
CLK1-211ENST00000481641 FAF2Q96CS3 445 aa18.5■□□□□ 0.55
CLK1-211ENST00000481641 AP2M1Q96CW1 435 aa18.5■□□□□ 0.55
CLK1-211ENST00000481641 TSGA13Q96PP4 275 aa18.5■□□□□ 0.55
CLK1-211ENST00000481641 TDRD1Q9BXT4 1180 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms