RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 DUX4L6P0CJ89 424 aa14.34□□□□□ -0.11
COL20A1-206ENST00000479501 DUX4L7P0CJ90 424 aa14.34□□□□□ -0.11
COL20A1-206ENST00000479501 CORO1AP31146 461 aaKnown RBP14.34□□□□□ -0.11
COL20A1-206ENST00000479501 PRKD1Q15139 912 aaPredicted RBP14.34□□□□□ -0.11
COL20A1-206ENST00000479501 DNAJB14Q8TBM8 379 aa14.34□□□□□ -0.11
COL20A1-206ENST00000479501 LINGO1Q96FE5 620 aa14.34□□□□□ -0.11
COL20A1-206ENST00000479501 LENG8Q96PV6 779 aaPredicted RBP14.34□□□□□ -0.11
COL20A1-206ENST00000479501 SMOQ99835 787 aa14.34□□□□□ -0.11
COL20A1-206ENST00000479501 C6orf62Q9GZU0 229 aaPredicted RBP14.34□□□□□ -0.11
COL20A1-206ENST00000479501 DUX4Q9UBX2 424 aa14.34□□□□□ -0.11
COL20A1-206ENST00000479501 TMCO1Q9UM00 188 aa14.34□□□□□ -0.11
COL20A1-206ENST00000479501 STBD1O95210 358 aa14.34□□□□□ -0.11
COL20A1-206ENST00000479501 CYP2A6P11509 494 aaPredicted RBP14.34□□□□□ -0.11
COL20A1-206ENST00000479501 PROZP22891 400 aa14.34□□□□□ -0.11
COL20A1-206ENST00000479501 S100A3P33764 101 aa14.34□□□□□ -0.11
COL20A1-206ENST00000479501 MSX2P35548 267 aaPredicted RBP14.34□□□□□ -0.11
COL20A1-206ENST00000479501 IGDCC3Q8IVU1 814 aa14.34□□□□□ -0.11
COL20A1-206ENST00000479501 ZNF557Q8N988 423 aaPredicted RBP14.34□□□□□ -0.11
COL20A1-206ENST00000479501 STYXQ8WUJ0 223 aa14.34□□□□□ -0.11
COL20A1-206ENST00000479501 EZH1Q92800 747 aaPredicted RBP14.34□□□□□ -0.11
COL20A1-206ENST00000479501 OMA1Q96E52 524 aa14.34□□□□□ -0.11
COL20A1-206ENST00000479501 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.33□□□□□ -0.11
COL20A1-206ENST00000479501 TMEM88BA6NKF7 163 aa14.33□□□□□ -0.11
COL20A1-206ENST00000479501 PKMP14618 531 aaKnown RBP14.33□□□□□ -0.11
COL20A1-206ENST00000479501 EPB42P16452 691 aa14.33□□□□□ -0.11
COL20A1-206ENST00000479501 SP100P23497 879 aaPredicted RBP14.33□□□□□ -0.11
COL20A1-206ENST00000479501 SLC18A2Q05940 514 aa14.33□□□□□ -0.11
COL20A1-206ENST00000479501 PRKG2Q13237 762 aa14.33□□□□□ -0.11
COL20A1-206ENST00000479501 LIN52Q52LA3 116 aa14.33□□□□□ -0.11
COL20A1-206ENST00000479501 SDE2Q6IQ49 451 aa14.33□□□□□ -0.11
COL20A1-206ENST00000479501 TXNDC11Q6PKC3 985 aa14.33□□□□□ -0.11
COL20A1-206ENST00000479501 CIR1Q86X95 450 aaPredicted RBP14.33□□□□□ -0.11
COL20A1-206ENST00000479501 HPS6Q86YV9 775 aa14.33□□□□□ -0.11
COL20A1-206ENST00000479501 SELENOMQ8WWX9 145 aa14.33□□□□□ -0.11
COL20A1-206ENST00000479501 UPF1Q92900 1129 aaKnown RBP eCLIP14.33□□□□□ -0.11
COL20A1-206ENST00000479501 DEFB118Q96PH6 123 aa14.33□□□□□ -0.11
COL20A1-206ENST00000479501 CORO1BQ9BR76 489 aa14.33□□□□□ -0.11
COL20A1-206ENST00000479501 CCDC28BQ9BUN5 200 aa14.33□□□□□ -0.11
COL20A1-206ENST00000479501 SH3BP4Q9P0V3 963 aa14.33□□□□□ -0.11
COL20A1-206ENST00000479501 LINC00032P0C843 101 aa14.33□□□□□ -0.12
COL20A1-206ENST00000479501 POLR2EP19388 210 aaKnown RBP14.33□□□□□ -0.12
COL20A1-206ENST00000479501 CCT8P50990 548 aa14.33□□□□□ -0.12
COL20A1-206ENST00000479501 PAFAH1B3Q15102 231 aaKnown RBP14.33□□□□□ -0.12
COL20A1-206ENST00000479501 TRMT11Q7Z4G4 463 aaKnown RBP14.33□□□□□ -0.12
COL20A1-206ENST00000479501 C11orf96Q7Z7L8 435 aa14.33□□□□□ -0.12
COL20A1-206ENST00000479501 NPAS2Q99743 824 aa14.33□□□□□ -0.12
COL20A1-206ENST00000479501 DGCR6LQ9BY27 220 aa14.33□□□□□ -0.12
COL20A1-206ENST00000479501 MAGEH1Q9H213 219 aa14.33□□□□□ -0.12
COL20A1-206ENST00000479501 PNPLA8Q9NP80 782 aa14.33□□□□□ -0.12
COL20A1-206ENST00000479501 LEF1Q9UJU2 399 aaPredicted RBP14.33□□□□□ -0.12
COL20A1-206ENST00000479501 F8W810 466 aa14.33□□□□□ -0.12
COL20A1-206ENST00000479501 FKTNO75072 461 aa14.33□□□□□ -0.12
COL20A1-206ENST00000479501 ULK1O75385 1050 aa14.33□□□□□ -0.12
COL20A1-206ENST00000479501 PRKCHP24723 683 aa14.33□□□□□ -0.12
COL20A1-206ENST00000479501 MAPKAPK2P49137 400 aa14.33□□□□□ -0.12
COL20A1-206ENST00000479501 IL10RBQ08334 325 aa14.33□□□□□ -0.12
COL20A1-206ENST00000479501 KIAA0930Q6ICG6 404 aaPredicted RBP14.33□□□□□ -0.12
COL20A1-206ENST00000479501 OR6K2Q8NGY2 324 aa14.33□□□□□ -0.12
COL20A1-206ENST00000479501 GRIN3AQ8TCU5 1115 aa14.33□□□□□ -0.12
COL20A1-206ENST00000479501 SUSD3Q96L08 255 aa14.33□□□□□ -0.12
COL20A1-206ENST00000479501 ZCCHC2Q9C0B9 1178 aaKnown RBP14.33□□□□□ -0.12
COL20A1-206ENST00000479501 REXO4Q9GZR2 422 aaKnown RBP14.33□□□□□ -0.12
COL20A1-206ENST00000479501 ASAH2Q9NR71 780 aa14.33□□□□□ -0.12
COL20A1-206ENST00000479501 AP4B1Q9Y6B7 739 aa14.33□□□□□ -0.12
COL20A1-206ENST00000479501 A0A1B0GUL6 1792 aa14.33□□□□□ -0.12
COL20A1-206ENST00000479501 PRMT5O14744 637 aaPredicted RBP14.33□□□□□ -0.12
COL20A1-206ENST00000479501 FFAR3O14843 346 aa14.33□□□□□ -0.12
COL20A1-206ENST00000479501 GPR42O15529 346 aa14.33□□□□□ -0.12
COL20A1-206ENST00000479501 NRP2O60462 931 aa14.33□□□□□ -0.12
COL20A1-206ENST00000479501 XYLBO75191 536 aa14.33□□□□□ -0.12
COL20A1-206ENST00000479501 ALOX15P16050 662 aaPredicted RBP14.33□□□□□ -0.12
COL20A1-206ENST00000479501 DGUOKQ16854 277 aa14.33□□□□□ -0.12
COL20A1-206ENST00000479501 KHDC1Q4VXA5 237 aaKnown RBP14.33□□□□□ -0.12
COL20A1-206ENST00000479501 CD99L2Q8TCZ2 262 aa14.33□□□□□ -0.12
COL20A1-206ENST00000479501 GIPC3Q8TF64 312 aa14.33□□□□□ -0.12
COL20A1-206ENST00000479501 EBF4Q9BQW3 602 aa14.33□□□□□ -0.12
COL20A1-206ENST00000479501 MRPS26Q9BYN8 205 aaKnown RBP14.33□□□□□ -0.12
COL20A1-206ENST00000479501 USP29Q9HBJ7 922 aa14.33□□□□□ -0.12
COL20A1-206ENST00000479501 PLK2Q9NYY3 685 aa14.33□□□□□ -0.12
COL20A1-206ENST00000479501 RSL24D1Q9UHA3 163 aaKnown RBP14.33□□□□□ -0.12
COL20A1-206ENST00000479501 RAI2Q9Y5P3 530 aa14.33□□□□□ -0.12
COL20A1-206ENST00000479501 GLI3P10071 1580 aa14.32□□□□□ -0.12
COL20A1-206ENST00000479501 STRCP1A6NGW2 1772 aa14.32□□□□□ -0.12
COL20A1-206ENST00000479501 SLC7A4O43246 635 aa14.32□□□□□ -0.12
COL20A1-206ENST00000479501 GABRR2P28476 465 aa14.32□□□□□ -0.12
COL20A1-206ENST00000479501 ACLYP53396 1101 aa14.32□□□□□ -0.12
COL20A1-206ENST00000479501 IRF8Q02556 426 aa14.32□□□□□ -0.12
COL20A1-206ENST00000479501 ZNF252P-AS1Q0IIN9 211 aa14.32□□□□□ -0.12
COL20A1-206ENST00000479501 PWP1Q13610 501 aa14.32□□□□□ -0.12
COL20A1-206ENST00000479501 ACOX1Q15067 660 aa14.32□□□□□ -0.12
COL20A1-206ENST00000479501 MAMDC4Q6UXC1 1216 aa14.32□□□□□ -0.12
COL20A1-206ENST00000479501 NANOGNBQ7Z5D8 188 aa14.32□□□□□ -0.12
COL20A1-206ENST00000479501 METTL3Q86U44 580 aaKnown RBP14.32□□□□□ -0.12
COL20A1-206ENST00000479501 SLC44A2Q8IWA5 706 aaPredicted RBP14.32□□□□□ -0.12
COL20A1-206ENST00000479501 ITFG1Q8TB96 612 aa14.32□□□□□ -0.12
COL20A1-206ENST00000479501 POLR1BQ9H9Y6 1135 aa14.32□□□□□ -0.12
COL20A1-206ENST00000479501 CRTAC1Q9NQ79 661 aa14.32□□□□□ -0.12
COL20A1-206ENST00000479501 UBAP1Q9NZ09 502 aa14.32□□□□□ -0.12
COL20A1-206ENST00000479501 H2AFY2Q9P0M6 372 aaPredicted RBP14.32□□□□□ -0.12
COL20A1-206ENST00000479501 C6orf203Q9P0P8 240 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms