RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 POLD3Q15054 466 aaPredicted RBP14.59□□□□□ -0.07
USP11-207ENST00000478596 LONRF2Q1L5Z9 754 aa14.59□□□□□ -0.07
USP11-207ENST00000478596 FSCBQ5H9T9 825 aa14.59□□□□□ -0.07
USP11-207ENST00000478596 NCBP2-AS2Q69YL0 99 aa14.59□□□□□ -0.07
USP11-207ENST00000478596 SETD3Q86TU7 594 aaPredicted RBP14.59□□□□□ -0.07
USP11-207ENST00000478596 KIF18AQ8NI77 898 aa14.59□□□□□ -0.07
USP11-207ENST00000478596 FAM71BQ8TC56 605 aa14.59□□□□□ -0.07
USP11-207ENST00000478596 FRS2Q8WU20 508 aa14.59□□□□□ -0.07
USP11-207ENST00000478596 MAIP1Q8WWC4 291 aa14.59□□□□□ -0.07
USP11-207ENST00000478596 P3H4Q92791 437 aa14.59□□□□□ -0.07
USP11-207ENST00000478596 FAF2Q96CS3 445 aa14.59□□□□□ -0.07
USP11-207ENST00000478596 RPL10LQ96L21 214 aaKnown RBP14.59□□□□□ -0.07
USP11-207ENST00000478596 TMEM74Q96NL1 305 aa14.59□□□□□ -0.07
USP11-207ENST00000478596 CATSPER2Q96P56 530 aa14.59□□□□□ -0.07
USP11-207ENST00000478596 FOXP3Q9BZS1 431 aa14.59□□□□□ -0.07
USP11-207ENST00000478596 B3GNT4Q9C0J1 378 aa14.59□□□□□ -0.07
USP11-207ENST00000478596 SYNDIG1Q9H7V2 258 aa14.59□□□□□ -0.07
USP11-207ENST00000478596 SP110Q9HB58 689 aa14.59□□□□□ -0.07
USP11-207ENST00000478596 ATP13A1Q9HD20 1204 aa14.59□□□□□ -0.07
USP11-207ENST00000478596 CUEDC1Q9NWM3 386 aaPredicted RBP14.59□□□□□ -0.07
USP11-207ENST00000478596 FOXJ2Q9P0K8 574 aa14.59□□□□□ -0.07
USP11-207ENST00000478596 KLF15Q9UIH9 416 aa14.59□□□□□ -0.07
USP11-207ENST00000478596 MFHAS1Q9Y4C4 1052 aa14.59□□□□□ -0.07
USP11-207ENST00000478596 LOXL2Q9Y4K0 774 aa14.59□□□□□ -0.07
USP11-207ENST00000478596 HS3ST3A1Q9Y663 406 aa14.59□□□□□ -0.07
USP11-207ENST00000478596 ZFC3H1O60293 1989 aaKnown RBP14.59□□□□□ -0.07
USP11-207ENST00000478596 CHD5Q8TDI0 1954 aa14.58□□□□□ -0.07
USP11-207ENST00000478596 PPP1R12AO14974 1030 aaPredicted RBP14.58□□□□□ -0.08
USP11-207ENST00000478596 MCF2LO15068 1137 aa14.58□□□□□ -0.08
USP11-207ENST00000478596 URI1O94763 535 aaPredicted RBP14.58□□□□□ -0.08
USP11-207ENST00000478596 MAP3K6O95382 1288 aa14.58□□□□□ -0.08
USP11-207ENST00000478596 PTPN7P35236 360 aa14.58□□□□□ -0.08
USP11-207ENST00000478596 NNMTP40261 264 aa14.58□□□□□ -0.08
USP11-207ENST00000478596 PAFAH1B1P43034 410 aa14.58□□□□□ -0.08
USP11-207ENST00000478596 GNA12Q03113 381 aa14.58□□□□□ -0.08
USP11-207ENST00000478596 PARP15Q460N3 678 aa14.58□□□□□ -0.08
USP11-207ENST00000478596 C5orf22Q49AR2 442 aa14.58□□□□□ -0.08
USP11-207ENST00000478596 PIP5KL1Q5T9C9 394 aa14.58□□□□□ -0.08
USP11-207ENST00000478596 CAPRIN2Q6IMN6 1127 aaKnown RBP14.58□□□□□ -0.08
USP11-207ENST00000478596 KYAT3Q6YP21 454 aaKnown RBP14.58□□□□□ -0.08
USP11-207ENST00000478596 PTAR1Q7Z6K3 402 aaPredicted RBP14.58□□□□□ -0.08
USP11-207ENST00000478596 NLRP14Q86W24 1093 aa14.58□□□□□ -0.08
USP11-207ENST00000478596 LZTR1Q8N653 840 aa14.58□□□□□ -0.08
USP11-207ENST00000478596 NPWQ8N729 165 aa14.58□□□□□ -0.08
USP11-207ENST00000478596 NETO2Q8NC67 525 aa14.58□□□□□ -0.08
USP11-207ENST00000478596 CCNYQ8ND76 341 aa14.58□□□□□ -0.08
USP11-207ENST00000478596 LMX1AQ8TE12 382 aa14.58□□□□□ -0.08
USP11-207ENST00000478596 OR8D1Q8WZ84 308 aa14.58□□□□□ -0.08
USP11-207ENST00000478596 KLK6Q92876 244 aa14.58□□□□□ -0.08
USP11-207ENST00000478596 BMFQ96LC9 184 aa14.58□□□□□ -0.08
USP11-207ENST00000478596 GFM1Q96RP9 751 aaKnown RBP14.58□□□□□ -0.08
USP11-207ENST00000478596 C2orf49Q9BVC5 232 aaPredicted RBP14.58□□□□□ -0.08
USP11-207ENST00000478596 RETREG1Q9H6L5 497 aa14.58□□□□□ -0.08
USP11-207ENST00000478596 ETNK2Q9NVF9 386 aa14.58□□□□□ -0.08
USP11-207ENST00000478596 SLC25A13Q9UJS0 675 aa14.58□□□□□ -0.08
USP11-207ENST00000478596 PADI4Q9UM07 663 aa14.58□□□□□ -0.08
USP11-207ENST00000478596 NF1P21359 2839 aa14.57□□□□□ -0.08
USP11-207ENST00000478596 RP1P56715 2156 aa14.57□□□□□ -0.08
USP11-207ENST00000478596 ILVBLA1L0T0 632 aa14.57□□□□□ -0.08
USP11-207ENST00000478596 WASH4PA8MWX3 477 aa14.57□□□□□ -0.08
USP11-207ENST00000478596 C9orf172C9J069 976 aa14.57□□□□□ -0.08
USP11-207ENST00000478596 RASA4BC9J798 803 aa14.57□□□□□ -0.08
USP11-207ENST00000478596 C1QTNF3-AMACRE9PGA6 284 aa14.57□□□□□ -0.08
USP11-207ENST00000478596 H7C0C1 242 aa14.57□□□□□ -0.08
USP11-207ENST00000478596 ALOX15BO15296 676 aa14.57□□□□□ -0.08
USP11-207ENST00000478596 RASA4O43374 803 aa14.57□□□□□ -0.08
USP11-207ENST00000478596 ITIH1P19827 911 aa14.57□□□□□ -0.08
USP11-207ENST00000478596 MX2P20592 715 aa14.57□□□□□ -0.08
USP11-207ENST00000478596 UQCRFS1P47985 274 aa14.57□□□□□ -0.08
USP11-207ENST00000478596 ATP5OP48047 213 aa14.57□□□□□ -0.08
USP11-207ENST00000478596 STK19P49842 368 aaPredicted RBP14.57□□□□□ -0.08
USP11-207ENST00000478596 NDST2P52849 883 aa14.57□□□□□ -0.08
USP11-207ENST00000478596 KLRB1Q12918 225 aa14.57□□□□□ -0.08
USP11-207ENST00000478596 SLC12A1Q13621 1099 aa14.57□□□□□ -0.08
USP11-207ENST00000478596 SLC9A4Q6AI14 798 aa14.57□□□□□ -0.08
USP11-207ENST00000478596 CXorf57Q6NSI4 855 aaKnown RBP14.57□□□□□ -0.08
USP11-207ENST00000478596 NPNTQ6UXI9 565 aa14.57□□□□□ -0.08
USP11-207ENST00000478596 ZNF783Q6ZMS7 281 aa14.57□□□□□ -0.08
USP11-207ENST00000478596 BBS12Q6ZW61 710 aa14.57□□□□□ -0.08
USP11-207ENST00000478596 BZW1Q7L1Q6 419 aaKnown RBP14.57□□□□□ -0.08
USP11-207ENST00000478596 SLC13A5Q86YT5 568 aaPredicted RBP14.57□□□□□ -0.08
USP11-207ENST00000478596 PQLC3Q8N755 202 aa14.57□□□□□ -0.08
USP11-207ENST00000478596 TTC13Q8NBP0 860 aa14.57□□□□□ -0.08
USP11-207ENST00000478596 OR7D4Q8NG98 312 aa14.57□□□□□ -0.08
USP11-207ENST00000478596 NSMCE1Q8WV22 266 aa14.57□□□□□ -0.08
USP11-207ENST00000478596 HMCESQ96FZ2 354 aa14.57□□□□□ -0.08
USP11-207ENST00000478596 FERMT1Q9BQL6 677 aa14.57□□□□□ -0.08
USP11-207ENST00000478596 MAGEH1Q9H213 219 aa14.57□□□□□ -0.08
USP11-207ENST00000478596 NDFIP2Q9NV92 336 aa14.57□□□□□ -0.08
USP11-207ENST00000478596 A1L4Q6 167 aa14.56□□□□□ -0.08
USP11-207ENST00000478596 LMO7DNF2Z398 122 aa14.56□□□□□ -0.08
USP11-207ENST00000478596 APOC4-APOC2K7ER74 178 aa14.56□□□□□ -0.08
USP11-207ENST00000478596 ZNF185O15231 689 aa14.56□□□□□ -0.08
USP11-207ENST00000478596 APOC2P02655 101 aa14.56□□□□□ -0.08
USP11-207ENST00000478596 RNF224P0DH78 156 aa14.56□□□□□ -0.08
USP11-207ENST00000478596 JUNDP17535 347 aa14.56□□□□□ -0.08
USP11-207ENST00000478596 VASPP50552 380 aaPredicted RBP14.56□□□□□ -0.08
USP11-207ENST00000478596 YBEYP58557 167 aaPredicted RBP14.56□□□□□ -0.08
USP11-207ENST00000478596 GBE1Q04446 702 aa14.56□□□□□ -0.08
USP11-207ENST00000478596 PAPD7Q5XG87 772 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms