RNA–Protein interactions for RNA: ENST00000477583.1

CACUL1-202, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-202ENST00000477583 ZNF182P17025 639 aaPredicted RBP2.6□□□□□ -1.99
CACUL1-202ENST00000477583 ARL3P36405 182 aa2.6□□□□□ -1.99
CACUL1-202ENST00000477583 METAP2P50579 478 aaKnown RBP eCLIP2.6□□□□□ -1.99
CACUL1-202ENST00000477583 GAS1P54826 345 aa2.6□□□□□ -1.99
CACUL1-202ENST00000477583 RRP1P56182 461 aaKnown RBP2.6□□□□□ -1.99
CACUL1-202ENST00000477583 RPL36AP83881 106 aaKnown RBP2.6□□□□□ -1.99
CACUL1-202ENST00000477583 BNC1Q01954 994 aa2.6□□□□□ -1.99
CACUL1-202ENST00000477583 EGR4Q05215 589 aa2.6□□□□□ -1.99
CACUL1-202ENST00000477583 GOLGA8DPQ0D2H9 430 aa2.6□□□□□ -1.99
CACUL1-202ENST00000477583 CSTF3Q12996 717 aaKnown RBP2.6□□□□□ -1.99
CACUL1-202ENST00000477583 MAMLD1Q13495 774 aa2.6□□□□□ -1.99
CACUL1-202ENST00000477583 EIF4A2Q14240 407 aaKnown RBP2.6□□□□□ -1.99
CACUL1-202ENST00000477583 PLCB4Q15147 1175 aa2.6□□□□□ -1.99
CACUL1-202ENST00000477583 EIF2S3LQ2VIR3 472 aaKnown RBP2.6□□□□□ -1.99
CACUL1-202ENST00000477583 USP41Q3LFD5 358 aa2.6□□□□□ -1.99
CACUL1-202ENST00000477583 SLC45A4Q5BKX6 768 aa2.6□□□□□ -1.99
CACUL1-202ENST00000477583 C6orf141Q5SZD1 244 aa2.6□□□□□ -1.99
CACUL1-202ENST00000477583 HYIQ5T013 277 aa2.6□□□□□ -1.99
CACUL1-202ENST00000477583 PLEKHA7Q6IQ23 1121 aa2.6□□□□□ -1.99
CACUL1-202ENST00000477583 NCEH1Q6PIU2 408 aa2.6□□□□□ -1.99
CACUL1-202ENST00000477583 C4orf50Q6ZRC1 276 aa2.6□□□□□ -1.99
CACUL1-202ENST00000477583 NEK10Q6ZWH5 1172 aa2.6□□□□□ -1.99
CACUL1-202ENST00000477583 IKBIPQ70UQ0 350 aa2.6□□□□□ -1.99
CACUL1-202ENST00000477583 GSTA5Q7RTV2 222 aa2.6□□□□□ -1.99
CACUL1-202ENST00000477583 ZNF329Q86UD4 541 aa2.6□□□□□ -1.99
CACUL1-202ENST00000477583 ZC3HC1Q86WB0 502 aaKnown RBP2.6□□□□□ -1.99
CACUL1-202ENST00000477583 CLIP4Q8N3C7 705 aa2.6□□□□□ -1.99
CACUL1-202ENST00000477583 SPATA6LQ8N4H0 392 aa2.6□□□□□ -1.99
CACUL1-202ENST00000477583 CLEC18CQ8NCF0 446 aa2.6□□□□□ -1.99
CACUL1-202ENST00000477583 ELP5Q8TE02 316 aa2.6□□□□□ -1.99
CACUL1-202ENST00000477583 CREB3L4Q8TEY5 395 aa2.6□□□□□ -1.99
CACUL1-202ENST00000477583 USP6NLQ92738 828 aa2.6□□□□□ -1.99
CACUL1-202ENST00000477583 BARD1Q99728 777 aaKnown RBP2.6□□□□□ -1.99
CACUL1-202ENST00000477583 TMEM47Q9BQJ4 181 aa2.6□□□□□ -1.99
CACUL1-202ENST00000477583 HAUS8Q9BT25 410 aa2.6□□□□□ -1.99
CACUL1-202ENST00000477583 NDST4Q9H3R1 872 aa2.6□□□□□ -1.99
CACUL1-202ENST00000477583 PLEKHA5Q9HAU0 1116 aa2.6□□□□□ -1.99
CACUL1-202ENST00000477583 CD93Q9NPY3 652 aa2.6□□□□□ -1.99
CACUL1-202ENST00000477583 HINT3Q9NQE9 182 aaKnown RBP2.6□□□□□ -1.99
CACUL1-202ENST00000477583 SEPT11Q9NVA2 429 aaKnown RBP2.6□□□□□ -1.99
CACUL1-202ENST00000477583 DLGAP2Q9P1A6 1054 aa2.6□□□□□ -1.99
CACUL1-202ENST00000477583 CORO1CQ9ULV4 474 aaPredicted RBP2.6□□□□□ -1.99
CACUL1-202ENST00000477583 ERVK-11Q9UQG0 969 aa2.6□□□□□ -1.99
CACUL1-202ENST00000477583 A0A0U1RQJ8 604 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 CPED1A4D0V7 1026 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 VCYO14598 125 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 LINC01565O15544 149 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 GRID2O43424 1007 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 DOK2O60496 412 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 ZBED4O75132 1171 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 NDUFS7O75251 213 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 PTP4A3O75365 173 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 CAMTA2O94983 1202 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 PAPSS2O95340 614 aaPredicted RBP2.59□□□□□ -1.99
CACUL1-202ENST00000477583 IPO7O95373 1038 aaKnown RBP2.59□□□□□ -1.99
CACUL1-202ENST00000477583 PRSS2P07478 247 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 ZNF12P17014 697 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 MAOAP21397 527 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 SSTR2P30874 369 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 STX2P32856 288 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 PPARGP37231 505 aaPredicted RBP2.59□□□□□ -1.99
CACUL1-202ENST00000477583 PDLIM4P50479 330 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 CLCN3P51790 818 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 ARF3P61204 181 aaPredicted RBP2.59□□□□□ -1.99
CACUL1-202ENST00000477583 ARF1P84077 181 aaKnown RBP2.59□□□□□ -1.99
CACUL1-202ENST00000477583 DDR1Q08345 913 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 NIPAL4Q0D2K0 466 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 DHX34Q14147 1143 aaKnown RBP2.59□□□□□ -1.99
CACUL1-202ENST00000477583 CDONQ4KMG0 1287 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 PPP6R3Q5H9R7 873 aaPredicted RBP2.59□□□□□ -1.99
CACUL1-202ENST00000477583 PAPPA-AS1Q5QFB9 102 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 FAM69BQ5VUD6 431 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 GGNBP1Q5YKI7 109 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 NADSYN1Q6IA69 706 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 PQLC2Q6ZP29 291 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 TMPRSS12Q86WS5 348 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 FOXRED2Q8IWF2 684 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 ARHGAP12Q8IWW6 846 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 DSELQ8IZU8 1212 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 PGBD5Q8N414 524 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 WDTC1Q8N5D0 677 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 OR14L1PQ8NHC6 308 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 FAM216AQ8WUB2 273 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 TMED6Q8WW62 240 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 RND1Q92730 232 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 ZKSCAN4Q969J2 545 aaPredicted RBP2.59□□□□□ -1.99
CACUL1-202ENST00000477583 IGSF8Q969P0 613 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 PHF21BQ96EK2 531 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 RRNAD1Q96FB5 475 aaKnown RBP2.59□□□□□ -1.99
CACUL1-202ENST00000477583 WBP1Q96G27 269 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 TMEM68Q96MH6 324 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 MMTAG2Q9BU76 263 aaKnown RBP2.59□□□□□ -1.99
CACUL1-202ENST00000477583 SEZ6LQ9BYH1 1024 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 IFIH1Q9BYX4 1025 aaKnown RBP2.59□□□□□ -1.99
CACUL1-202ENST00000477583 PPP1R3EQ9H7J1 279 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 SLC28A3Q9HAS3 691 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 RANGRFQ9HD47 186 aaPredicted RBP2.59□□□□□ -1.99
CACUL1-202ENST00000477583 NOX4Q9NPH5 578 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 CNGB3Q9NQW8 809 aa2.59□□□□□ -1.99
CACUL1-202ENST00000477583 EIF2B3Q9NR50 452 aaKnown RBP2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms