RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 ZFYVE1Q9HBF4 777 aa15.32■□□□□ 0.04
SEC13-215ENST00000477547 GRHL1Q9NZI5 618 aa15.32■□□□□ 0.04
SEC13-215ENST00000477547 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.32■□□□□ 0.04
SEC13-215ENST00000477547 ANAPC5Q9UJX4 755 aa15.32■□□□□ 0.04
SEC13-215ENST00000477547 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.32■□□□□ 0.04
SEC13-215ENST00000477547 GON4LQ3T8J9 2241 aa15.32■□□□□ 0.04
SEC13-215ENST00000477547 PI4KAP42356 2102 aa15.32■□□□□ 0.04
SEC13-215ENST00000477547 LRP4O75096 1905 aa15.32■□□□□ 0.04
SEC13-215ENST00000477547 TMEM131Q92545 1883 aa15.31■□□□□ 0.04
SEC13-215ENST00000477547 GOLGA8CPA6NN73 597 aa15.31■□□□□ 0.04
SEC13-215ENST00000477547 METTL12A8MUP2 240 aa15.31■□□□□ 0.04
SEC13-215ENST00000477547 C10orf142B7Z368 130 aa15.31■□□□□ 0.04
SEC13-215ENST00000477547 AURKAO14965 403 aa15.31■□□□□ 0.04
SEC13-215ENST00000477547 CRTAMO95727 393 aa15.31■□□□□ 0.04
SEC13-215ENST00000477547 RHOXF2BP0C7M4 288 aa15.31■□□□□ 0.04
SEC13-215ENST00000477547 MLNP12872 115 aa15.31■□□□□ 0.04
SEC13-215ENST00000477547 MGAT1P26572 445 aa15.31■□□□□ 0.04
SEC13-215ENST00000477547 DHPSP49366 369 aaPredicted RBP15.31■□□□□ 0.04
SEC13-215ENST00000477547 SPEM2Q0P670 501 aa15.31■□□□□ 0.04
SEC13-215ENST00000477547 TAF1AQ15573 450 aaPredicted RBP15.31■□□□□ 0.04
SEC13-215ENST00000477547 LPAL2Q16609 132 aa15.31■□□□□ 0.04
SEC13-215ENST00000477547 CDKN3Q16667 212 aa15.31■□□□□ 0.04
SEC13-215ENST00000477547 PLK5Q496M5 336 aa15.31■□□□□ 0.04
SEC13-215ENST00000477547 CERCAMQ5T4B2 595 aa15.31■□□□□ 0.04
SEC13-215ENST00000477547 LYSMD4Q5XG99 296 aa15.31■□□□□ 0.04
SEC13-215ENST00000477547 PPHLN1Q8NEY8 458 aaKnown RBP15.31■□□□□ 0.04
SEC13-215ENST00000477547 NUS1Q96E22 293 aa15.31■□□□□ 0.04
SEC13-215ENST00000477547 DTD2Q96FN9 168 aa15.31■□□□□ 0.04
SEC13-215ENST00000477547 COQ10AQ96MF6 247 aa15.31■□□□□ 0.04
SEC13-215ENST00000477547 MYOCQ99972 504 aa15.31■□□□□ 0.04
SEC13-215ENST00000477547 RHOXF2Q9BQY4 288 aa15.31■□□□□ 0.04
SEC13-215ENST00000477547 C1QTNF7Q9BXJ2 289 aa15.31■□□□□ 0.04
SEC13-215ENST00000477547 FZD3Q9NPG1 666 aa15.31■□□□□ 0.04
SEC13-215ENST00000477547 RRAGDQ9NQL2 400 aaPredicted RBP15.31■□□□□ 0.04
SEC13-215ENST00000477547 SYBUQ9NX95 663 aa15.31■□□□□ 0.04
SEC13-215ENST00000477547 PKD2L2Q9NZM6 624 aa15.31■□□□□ 0.04
SEC13-215ENST00000477547 BFARQ9NZS9 450 aa15.31■□□□□ 0.04
SEC13-215ENST00000477547 DMGDHQ9UI17 866 aaKnown RBP15.31■□□□□ 0.04
SEC13-215ENST00000477547 ARL5AQ9Y689 179 aa15.31■□□□□ 0.04
SEC13-215ENST00000477547 ATXN2Q99700 1313 aaKnown RBP15.31■□□□□ 0.04
SEC13-215ENST00000477547 SLC31A1O15431 190 aa15.3■□□□□ 0.04
SEC13-215ENST00000477547 BUD23O43709 281 aaKnown RBP15.3■□□□□ 0.04
SEC13-215ENST00000477547 RECQL5O94762 991 aaPredicted RBP15.3■□□□□ 0.04
SEC13-215ENST00000477547 GM2AP17900 193 aa15.3■□□□□ 0.04
SEC13-215ENST00000477547 ETV3P41162 512 aa15.3■□□□□ 0.04
SEC13-215ENST00000477547 PTGER3P43115 390 aa15.3■□□□□ 0.04
SEC13-215ENST00000477547 ZNF140P52738 457 aaPredicted RBP15.3■□□□□ 0.04
SEC13-215ENST00000477547 CRADDP78560 199 aa15.3■□□□□ 0.04
SEC13-215ENST00000477547 SGCGQ13326 291 aa15.3■□□□□ 0.04
SEC13-215ENST00000477547 MSLNQ13421 630 aaPredicted RBP15.3■□□□□ 0.04
SEC13-215ENST00000477547 FGL2Q14314 439 aa15.3■□□□□ 0.04
SEC13-215ENST00000477547 HIF1AQ16665 826 aa15.3■□□□□ 0.04
SEC13-215ENST00000477547 CCDC38Q502W7 563 aa15.3■□□□□ 0.04
SEC13-215ENST00000477547 CAND1Q86VP6 1230 aaKnown RBP15.3■□□□□ 0.04
SEC13-215ENST00000477547 BRSK1Q8TDC3 778 aa15.3■□□□□ 0.04
SEC13-215ENST00000477547 C1QTNF2Q9BXJ5 285 aa15.3■□□□□ 0.04
SEC13-215ENST00000477547 SLC17A9Q9BYT1 436 aa15.3■□□□□ 0.04
SEC13-215ENST00000477547 FRMD8Q9BZ67 464 aaPredicted RBP15.3■□□□□ 0.04
SEC13-215ENST00000477547 IL22Q9GZX6 179 aa15.3■□□□□ 0.04
SEC13-215ENST00000477547 EPB41L5Q9HCM4 733 aa15.3■□□□□ 0.04
SEC13-215ENST00000477547 GMEB2Q9UKD1 530 aa15.3■□□□□ 0.04
SEC13-215ENST00000477547 DMTF1Q9Y222 760 aa15.3■□□□□ 0.04
SEC13-215ENST00000477547 PKP3Q9Y446 797 aa15.3■□□□□ 0.04
SEC13-215ENST00000477547 TCAF1Q9Y4C2 921 aa15.3■□□□□ 0.04
SEC13-215ENST00000477547 CCDC78A2IDD5 438 aa15.29■□□□□ 0.04
SEC13-215ENST00000477547 HEATR9A2RTY3 570 aa15.29■□□□□ 0.04
SEC13-215ENST00000477547 C2orf81A6NN90 581 aa15.29■□□□□ 0.04
SEC13-215ENST00000477547 WNT9AO14904 365 aa15.29■□□□□ 0.04
SEC13-215ENST00000477547 TP73O15350 636 aa15.29■□□□□ 0.04
SEC13-215ENST00000477547 AVILO75366 819 aa15.29■□□□□ 0.04
SEC13-215ENST00000477547 RHOBTB1O94844 696 aa15.29■□□□□ 0.04
SEC13-215ENST00000477547 LPOP22079 712 aaPredicted RBP15.29■□□□□ 0.04
SEC13-215ENST00000477547 KCNA4P22459 653 aa15.29■□□□□ 0.04
SEC13-215ENST00000477547 HNRNPA2B1P22626 353 aaKnown RBP15.29■□□□□ 0.04
SEC13-215ENST00000477547 AKT2P31751 481 aa15.29■□□□□ 0.04
SEC13-215ENST00000477547 HMGCLP35914 325 aa15.29■□□□□ 0.04
SEC13-215ENST00000477547 NUDT1P36639 197 aa15.29■□□□□ 0.04
SEC13-215ENST00000477547 MAGEA3P43357 314 aa15.29■□□□□ 0.04
SEC13-215ENST00000477547 PDE1BQ01064 536 aa15.29■□□□□ 0.04
SEC13-215ENST00000477547 PTSQ03393 145 aa15.29■□□□□ 0.04
SEC13-215ENST00000477547 IRF4Q15306 451 aa15.29■□□□□ 0.04
SEC13-215ENST00000477547 TRADDQ15628 312 aa15.29■□□□□ 0.04
SEC13-215ENST00000477547 DNAJC21Q5F1R6 531 aaKnown RBP15.29■□□□□ 0.04
SEC13-215ENST00000477547 SPDYCQ5MJ68 293 aa15.29■□□□□ 0.04
SEC13-215ENST00000477547 WDR45BQ5MNZ6 344 aa15.29■□□□□ 0.04
SEC13-215ENST00000477547 ALS2CLQ60I27 953 aa15.29■□□□□ 0.04
SEC13-215ENST00000477547 CASC4Q6P4E1 433 aa15.29■□□□□ 0.04
SEC13-215ENST00000477547 Q6ZVL8 140 aa15.29■□□□□ 0.04
SEC13-215ENST00000477547 TMC3Q7Z5M5 1100 aa15.29■□□□□ 0.04
SEC13-215ENST00000477547 RGL4Q8IZJ4 473 aa15.29■□□□□ 0.04
SEC13-215ENST00000477547 DENND6BQ8NEG7 585 aa15.29■□□□□ 0.04
SEC13-215ENST00000477547 SEC14L1Q92503 715 aa15.29■□□□□ 0.04
SEC13-215ENST00000477547 EID2BQ96D98 161 aa15.29■□□□□ 0.04
SEC13-215ENST00000477547 ZC3H10Q96K80 434 aaKnown RBP15.29■□□□□ 0.04
SEC13-215ENST00000477547 RANBP9Q96S59 729 aa15.29■□□□□ 0.04
SEC13-215ENST00000477547 MIR1-1HGQ9H1L0 117 aa15.29■□□□□ 0.04
SEC13-215ENST00000477547 FAM114A2Q9NRY5 505 aa15.29■□□□□ 0.04
SEC13-215ENST00000477547 SAMD15Q9P1V8 674 aa15.29■□□□□ 0.04
SEC13-215ENST00000477547 EIF2B4Q9UI10 523 aaKnown RBP15.29■□□□□ 0.04
SEC13-215ENST00000477547 CD84Q9UIB8 345 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms