RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 TMEM259Q4ZIN3 620 aa16.17■□□□□ 0.18
VHL-203ENST00000477538 SEL1L3Q68CR1 1132 aa16.17■□□□□ 0.18
VHL-203ENST00000477538 TRIM69Q86WT6 500 aa16.17■□□□□ 0.18
VHL-203ENST00000477538 HORMAD1Q86X24 394 aa16.17■□□□□ 0.18
VHL-203ENST00000477538 IGDCC3Q8IVU1 814 aa16.17■□□□□ 0.18
VHL-203ENST00000477538 FBXO36Q8NEA4 188 aa16.17■□□□□ 0.18
VHL-203ENST00000477538 OR13C4Q8NGS5 318 aa16.17■□□□□ 0.18
VHL-203ENST00000477538 PYROXD1Q8WU10 500 aa16.17■□□□□ 0.18
VHL-203ENST00000477538 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.17■□□□□ 0.18
VHL-203ENST00000477538 DNAJC1Q96KC8 554 aaKnown RBP16.17■□□□□ 0.18
VHL-203ENST00000477538 COQ10AQ96MF6 247 aa16.17■□□□□ 0.18
VHL-203ENST00000477538 ZNF778Q96MU6 729 aa16.17■□□□□ 0.18
VHL-203ENST00000477538 NAT9Q9BTE0 207 aa16.17■□□□□ 0.18
VHL-203ENST00000477538 C1QTNF1Q9BXJ1 281 aa16.17■□□□□ 0.18
VHL-203ENST00000477538 BPIFA1Q9NP55 256 aa16.17■□□□□ 0.18
VHL-203ENST00000477538 NLE1Q9NVX2 485 aaPredicted RBP16.17■□□□□ 0.18
VHL-203ENST00000477538 ZC3H7BQ9UGR2 993 aaKnown RBP16.17■□□□□ 0.18
VHL-203ENST00000477538 MBD1Q9UIS9 605 aaPredicted RBP16.17■□□□□ 0.18
VHL-203ENST00000477538 RAB21Q9UL25 225 aa16.17■□□□□ 0.18
VHL-203ENST00000477538 RIMKLBQ9ULI2 386 aa16.17■□□□□ 0.18
VHL-203ENST00000477538 RALGAPA1Q6GYQ0 2036 aa16.17■□□□□ 0.18
VHL-203ENST00000477538 ZFC3H1O60293 1989 aaKnown RBP16.17■□□□□ 0.18
VHL-203ENST00000477538 GOLGA8CPA6NN73 597 aa16.16■□□□□ 0.18
VHL-203ENST00000477538 FAM153BP0C7A2 387 aa16.16■□□□□ 0.18
VHL-203ENST00000477538 GM2AP17900 193 aa16.16■□□□□ 0.18
VHL-203ENST00000477538 PGAM1P18669 254 aa16.16■□□□□ 0.18
VHL-203ENST00000477538 NMBRP28336 390 aa16.16■□□□□ 0.18
VHL-203ENST00000477538 MAGEA4P43358 317 aa16.16■□□□□ 0.18
VHL-203ENST00000477538 SPINT3P49223 89 aa16.16■□□□□ 0.18
VHL-203ENST00000477538 TMPRSS15P98073 1019 aa16.16■□□□□ 0.18
VHL-203ENST00000477538 ANGPT1Q15389 498 aa16.16■□□□□ 0.18
VHL-203ENST00000477538 SKIDA1Q1XH10 827 aa16.16■□□□□ 0.18
VHL-203ENST00000477538 FAM153CQ494X1 144 aa16.16■□□□□ 0.18
VHL-203ENST00000477538 KIAA0895LQ68EN5 471 aa16.16■□□□□ 0.18
VHL-203ENST00000477538 CES3Q6UWW8 571 aa16.16■□□□□ 0.18
VHL-203ENST00000477538 SLC36A4Q6YBV0 504 aa16.16■□□□□ 0.18
VHL-203ENST00000477538 RFLNAQ6ZTI6 216 aa16.16■□□□□ 0.18
VHL-203ENST00000477538 Q6ZVL8 140 aa16.16■□□□□ 0.18
VHL-203ENST00000477538 CCNJLQ8IV13 435 aa16.16■□□□□ 0.18
VHL-203ENST00000477538 RAVER1Q8IY67 606 aaKnown RBP16.16■□□□□ 0.18
VHL-203ENST00000477538 CBARPQ8N350 705 aaPredicted RBP16.16■□□□□ 0.18
VHL-203ENST00000477538 KLK6Q92876 244 aa16.16■□□□□ 0.18
VHL-203ENST00000477538 PEX13Q92968 403 aa16.16■□□□□ 0.18
VHL-203ENST00000477538 ZNF669Q96BR6 464 aaPredicted RBP16.16■□□□□ 0.18
VHL-203ENST00000477538 MFSD3Q96ES6 412 aa16.16■□□□□ 0.18
VHL-203ENST00000477538 CFAP36Q96G28 342 aa16.16■□□□□ 0.18
VHL-203ENST00000477538 TRIM56Q9BRZ2 755 aaKnown RBP16.16■□□□□ 0.18
VHL-203ENST00000477538 FAM126AQ9BYI3 521 aaPredicted RBP16.16■□□□□ 0.18
VHL-203ENST00000477538 C6orf106Q9H6K1 298 aaPredicted RBP16.16■□□□□ 0.18
VHL-203ENST00000477538 TREX1Q9NSU2 369 aa16.16■□□□□ 0.18
VHL-203ENST00000477538 SLC2A6Q9UGQ3 507 aa16.16■□□□□ 0.18
VHL-203ENST00000477538 RPS6KL1Q9Y6S9 549 aa16.16■□□□□ 0.18
VHL-203ENST00000477538 CCL22O00626 93 aa16.15■□□□□ 0.18
VHL-203ENST00000477538 WNT9AO14904 365 aa16.15■□□□□ 0.18
VHL-203ENST00000477538 MAP3K13O43283 966 aa16.15■□□□□ 0.18
VHL-203ENST00000477538 RECQL5O94762 991 aaPredicted RBP16.15■□□□□ 0.18
VHL-203ENST00000477538 USP1O94782 785 aa16.15■□□□□ 0.18
VHL-203ENST00000477538 POLBP06746 335 aa16.15■□□□□ 0.18
VHL-203ENST00000477538 BPIP17213 487 aa16.15■□□□□ 0.18
VHL-203ENST00000477538 BCKDHBP21953 392 aa16.15■□□□□ 0.18
VHL-203ENST00000477538 MAT2AP31153 395 aaKnown RBP16.15■□□□□ 0.18
VHL-203ENST00000477538 HADHAP40939 763 aa16.15■□□□□ 0.18
VHL-203ENST00000477538 ETV3P41162 512 aa16.15■□□□□ 0.18
VHL-203ENST00000477538 RPL6Q02878 288 aaKnown RBP16.15■□□□□ 0.18
VHL-203ENST00000477538 CREB5Q02930 508 aa16.15■□□□□ 0.18
VHL-203ENST00000477538 SLMAPQ14BN4 828 aa16.15■□□□□ 0.18
VHL-203ENST00000477538 ZNF284Q2VY69 593 aa16.15■□□□□ 0.18
VHL-203ENST00000477538 ZNF528Q3MIS6 628 aa16.15■□□□□ 0.18
VHL-203ENST00000477538 ANKRD20A4Q4UJ75 823 aa16.15■□□□□ 0.18
VHL-203ENST00000477538 ESRP1Q6NXG1 681 aaKnown RBP16.15■□□□□ 0.18
VHL-203ENST00000477538 CYP2U1Q7Z449 544 aa16.15■□□□□ 0.18
VHL-203ENST00000477538 TECPR1Q7Z6L1 1165 aa16.15■□□□□ 0.18
VHL-203ENST00000477538 TMEM135Q86UB9 458 aa16.15■□□□□ 0.18
VHL-203ENST00000477538 NRSN1Q8IZ57 195 aa16.15■□□□□ 0.18
VHL-203ENST00000477538 OR13J1Q8NGT2 312 aa16.15■□□□□ 0.18
VHL-203ENST00000477538 NUS1Q96E22 293 aa16.15■□□□□ 0.18
VHL-203ENST00000477538 DTD2Q96FN9 168 aa16.15■□□□□ 0.18
VHL-203ENST00000477538 C9orf72Q96LT7 481 aa16.15■□□□□ 0.18
VHL-203ENST00000477538 C19orf43Q9BQ61 176 aa16.15■□□□□ 0.18
VHL-203ENST00000477538 C1QTNF2Q9BXJ5 285 aa16.15■□□□□ 0.18
VHL-203ENST00000477538 SLC17A9Q9BYT1 436 aa16.15■□□□□ 0.18
VHL-203ENST00000477538 PCED1AQ9H1Q7 454 aa16.15■□□□□ 0.18
VHL-203ENST00000477538 RAD18Q9NS91 495 aa16.15■□□□□ 0.18
VHL-203ENST00000477538 CD84Q9UIB8 345 aa16.15■□□□□ 0.18
VHL-203ENST00000477538 FKBPLQ9UIM3 349 aa16.15■□□□□ 0.18
VHL-203ENST00000477538 FNDC3AQ9Y2H6 1198 aaKnown RBP16.15■□□□□ 0.18
VHL-203ENST00000477538 TDRD6O60522 2096 aaKnown RBP16.15■□□□□ 0.18
VHL-203ENST00000477538 LRP4O75096 1905 aa16.14■□□□□ 0.17
VHL-203ENST00000477538 RGSL1A5PLK6 1076 aa16.14■□□□□ 0.17
VHL-203ENST00000477538 C10orf142B7Z368 130 aa16.14■□□□□ 0.17
VHL-203ENST00000477538 GALR2O43603 387 aaPredicted RBP16.14■□□□□ 0.17
VHL-203ENST00000477538 RPP40O75818 363 aaKnown RBP16.14■□□□□ 0.17
VHL-203ENST00000477538 FSBPO95073 299 aa16.14■□□□□ 0.17
VHL-203ENST00000477538 TTC4O95801 387 aa16.14■□□□□ 0.17
VHL-203ENST00000477538 SP9P0CG40 484 aa16.14■□□□□ 0.17
VHL-203ENST00000477538 PAMP19021 973 aa16.14■□□□□ 0.17
VHL-203ENST00000477538 PSMA3P25788 255 aa16.14■□□□□ 0.17
VHL-203ENST00000477538 SPAM1P38567 509 aa16.14■□□□□ 0.17
VHL-203ENST00000477538 CCR5P51681 352 aa16.14■□□□□ 0.17
VHL-203ENST00000477538 ARSDP51689 593 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms