RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 TNFRSF12AQ9NP84 129 aa13.4□□□□□ -0.26
HDAC7-221ENST00000477203 SAR1AQ9NR31 198 aa13.4□□□□□ -0.26
HDAC7-221ENST00000477203 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.4□□□□□ -0.26
HDAC7-221ENST00000477203 GALPQ9UBC7 116 aa13.4□□□□□ -0.26
HDAC7-221ENST00000477203 EVLQ9UI08 416 aaPredicted RBP13.4□□□□□ -0.26
HDAC7-221ENST00000477203 CCL26Q9Y258 94 aa13.4□□□□□ -0.26
HDAC7-221ENST00000477203 CHD5Q8TDI0 1954 aa13.4□□□□□ -0.26
HDAC7-221ENST00000477203 HIDE1A8MVS5 230 aa13.4□□□□□ -0.26
HDAC7-221ENST00000477203 STK19P49842 368 aaPredicted RBP13.4□□□□□ -0.26
HDAC7-221ENST00000477203 NSUN2Q08J23 767 aaKnown RBP eCLIP13.4□□□□□ -0.26
HDAC7-221ENST00000477203 SMARCB1Q12824 385 aa13.4□□□□□ -0.26
HDAC7-221ENST00000477203 KHDC1Q4VXA5 237 aaKnown RBP13.4□□□□□ -0.26
HDAC7-221ENST00000477203 LIPMQ5VYY2 423 aa13.4□□□□□ -0.26
HDAC7-221ENST00000477203 CLEC6AQ6EIG7 209 aa13.4□□□□□ -0.26
HDAC7-221ENST00000477203 DNAJC14Q6Y2X3 702 aaPredicted RBP13.4□□□□□ -0.26
HDAC7-221ENST00000477203 TRIM67Q6ZTA4 783 aa13.4□□□□□ -0.26
HDAC7-221ENST00000477203 RBM12BQ8IXT5 1001 aaKnown RBP13.4□□□□□ -0.26
HDAC7-221ENST00000477203 MCMBPQ9BTE3 642 aa13.4□□□□□ -0.26
HDAC7-221ENST00000477203 LOC285095A0A1B0GVY8 99 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 SPECC1L-ADORA2AF8WAN1 911 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 ATP5HO75947 161 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 KLHL2O95198 593 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 LRG1P02750 347 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 TRAF2Q12933 501 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 CBX2Q14781 532 aaPredicted RBP13.39□□□□□ -0.27
HDAC7-221ENST00000477203 ZNF549Q6P9A3 640 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 ISLR2Q6UXK2 745 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 ZYG11AQ6WRX3 759 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 CMTM8Q8IZV2 173 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 RNF148Q8N7C7 305 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 PDZD8Q8NEN9 1154 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 OR4L1Q8NH43 312 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 TCEAL4Q96EI5 215 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 CDKN2AIPNLQ96HQ2 116 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 GPR78Q96P69 363 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 CDH19Q9H159 772 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 NSMCE4AQ9NXX6 385 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 PCDHB12Q9Y5F1 795 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 TRIOO75962 3097 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 SUPT7LO94864 414 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 NDST3O95803 873 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 C8AP07357 584 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 ARL1P40616 181 aaPredicted RBP13.39□□□□□ -0.27
HDAC7-221ENST00000477203 INHBCP55103 352 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 NME5P56597 212 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 NTHL1P78549 312 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 ARMCX6Q7L4S7 300 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 PIANPQ8IYJ0 282 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 MRPL46Q9H2W6 279 aaKnown RBP13.39□□□□□ -0.27
HDAC7-221ENST00000477203 CATSPERZQ9NTU4 200 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 VPS51Q9UID3 782 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 PIKFYVEQ9Y2I7 2098 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 AIM2O14862 343 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 PER2O15055 1255 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 TRIM24O15164 1050 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 KDELR3O43731 214 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 KRT36O76013 467 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 PRLP01236 227 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 TUBB3Q13509 450 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 FAM83EQ2M2I3 478 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 POM121L1PQ3SYA9 428 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 PSAPL1Q6NUJ1 521 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 RBM23Q86U06 439 aaKnown RBP13.39□□□□□ -0.27
HDAC7-221ENST00000477203 ADAMTS19Q8TE59 1207 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 STYXQ8WUJ0 223 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 PSKH2Q96QS6 385 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 FEM1AQ9BSK4 669 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 IGSF5Q9NSI5 407 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 POLR3BQ9NW08 1133 aaPredicted RBP13.39□□□□□ -0.27
HDAC7-221ENST00000477203 NCKIPSDQ9NZQ3 722 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 GIMAP2Q9UG22 337 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 PTGDR2Q9Y5Y4 395 aa13.39□□□□□ -0.27
HDAC7-221ENST00000477203 MROH6A6NGR9 719 aa13.38□□□□□ -0.27
HDAC7-221ENST00000477203 TPD52L2O43399 206 aaKnown RBP13.38□□□□□ -0.27
HDAC7-221ENST00000477203 RHOBTB1O94844 696 aa13.38□□□□□ -0.27
HDAC7-221ENST00000477203 SKIV2L2P42285 1042 aaKnown RBP13.38□□□□□ -0.27
HDAC7-221ENST00000477203 CTSOP43234 321 aaPredicted RBP13.38□□□□□ -0.27
HDAC7-221ENST00000477203 ERVFC1P60507 584 aa13.38□□□□□ -0.27
HDAC7-221ENST00000477203 TMED1Q13445 227 aa13.38□□□□□ -0.27
HDAC7-221ENST00000477203 NAT16Q8N8M0 369 aa13.38□□□□□ -0.27
HDAC7-221ENST00000477203 CALML6Q8TD86 181 aa13.38□□□□□ -0.27
HDAC7-221ENST00000477203 SCG3Q8WXD2 468 aaKnown RBP13.38□□□□□ -0.27
HDAC7-221ENST00000477203 ING5Q8WYH8 240 aa13.38□□□□□ -0.27
HDAC7-221ENST00000477203 PTERQ96BW5 349 aa13.38□□□□□ -0.27
HDAC7-221ENST00000477203 SLC45A3Q96JT2 553 aa13.38□□□□□ -0.27
HDAC7-221ENST00000477203 ZFRQ96KR1 1074 aaKnown RBP13.38□□□□□ -0.27
HDAC7-221ENST00000477203 CCDC106Q9BWC9 280 aa13.38□□□□□ -0.27
HDAC7-221ENST00000477203 ARNT2Q9HBZ2 717 aa13.38□□□□□ -0.27
HDAC7-221ENST00000477203 UBXN8O00124 270 aa13.38□□□□□ -0.27
HDAC7-221ENST00000477203 CFLARO15519 480 aa13.38□□□□□ -0.27
HDAC7-221ENST00000477203 SUPT3HO75486 399 aa13.38□□□□□ -0.27
HDAC7-221ENST00000477203 CD160O95971 181 aa13.38□□□□□ -0.27
HDAC7-221ENST00000477203 FGF1P05230 155 aa13.38□□□□□ -0.27
HDAC7-221ENST00000477203 PDAP1Q13442 181 aaKnown RBP13.38□□□□□ -0.27
HDAC7-221ENST00000477203 RAB33AQ14088 237 aa13.38□□□□□ -0.27
HDAC7-221ENST00000477203 SEL1L3Q68CR1 1132 aa13.38□□□□□ -0.27
HDAC7-221ENST00000477203 CNTN4Q8IWV2 1026 aa13.38□□□□□ -0.27
HDAC7-221ENST00000477203 LSMEM2Q8N112 164 aa13.38□□□□□ -0.27
HDAC7-221ENST00000477203 CFAP61Q8NHU2 1237 aa13.38□□□□□ -0.27
HDAC7-221ENST00000477203 BRSK1Q8TDC3 778 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms