RNA–Protein interactions for RNA: ENST00000474725.5

EDEM3-206, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 2

Gene EDEM3, Length 1,911 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-206ENST00000474725 FBXO6Q9NRD1 293 aaPredicted RBP20.27■□□□□ 0.84
EDEM3-206ENST00000474725 FNDC3AQ9Y2H6 1198 aaKnown RBP20.27■□□□□ 0.84
EDEM3-206ENST00000474725 MTO1Q9Y2Z2 717 aaKnown RBP20.27■□□□□ 0.84
EDEM3-206ENST00000474725 NPC1O15118 1278 aa20.26■□□□□ 0.83
EDEM3-206ENST00000474725 HAUS5O94927 633 aa20.26■□□□□ 0.83
EDEM3-206ENST00000474725 IL1BP01584 269 aa20.26■□□□□ 0.83
EDEM3-206ENST00000474725 PRSS56P0CW18 603 aa20.26■□□□□ 0.83
EDEM3-206ENST00000474725 KRT4P19013 534 aa20.26■□□□□ 0.83
EDEM3-206ENST00000474725 MC4RP32245 332 aa20.26■□□□□ 0.83
EDEM3-206ENST00000474725 PFKPQ01813 784 aa20.26■□□□□ 0.83
EDEM3-206ENST00000474725 E2F5Q15329 346 aa20.26■□□□□ 0.83
EDEM3-206ENST00000474725 PUS10Q3MIT2 529 aaKnown RBP20.26■□□□□ 0.83
EDEM3-206ENST00000474725 C2orf27AQ580R0 203 aa20.26■□□□□ 0.83
EDEM3-206ENST00000474725 ZNF789Q5FWF6 425 aa20.26■□□□□ 0.83
EDEM3-206ENST00000474725 AFTPHQ6ULP2 937 aa20.26■□□□□ 0.83
EDEM3-206ENST00000474725 ZC3HC1Q86WB0 502 aaKnown RBP20.26■□□□□ 0.83
EDEM3-206ENST00000474725 CILP2Q8IUL8 1156 aa20.26■□□□□ 0.83
EDEM3-206ENST00000474725 MMAAQ8IVH4 418 aaKnown RBP20.26■□□□□ 0.83
EDEM3-206ENST00000474725 GABPB2Q8TAK5 448 aaPredicted RBP20.26■□□□□ 0.83
EDEM3-206ENST00000474725 SMC6Q96SB8 1091 aa20.26■□□□□ 0.83
EDEM3-206ENST00000474725 KCNK9Q9NPC2 374 aa20.26■□□□□ 0.83
EDEM3-206ENST00000474725 CATSPERZQ9NTU4 200 aa20.26■□□□□ 0.83
EDEM3-206ENST00000474725 FAM50BQ9Y247 325 aa20.26■□□□□ 0.83
EDEM3-206ENST00000474725 MYO10Q9HD67 2058 aa20.26■□□□□ 0.83
EDEM3-206ENST00000474725 LOC730098B7Z3J9 87 aa20.25■□□□□ 0.83
EDEM3-206ENST00000474725 H7C0S8 307 aa20.25■□□□□ 0.83
EDEM3-206ENST00000474725 SPAG7O75391 227 aa20.25■□□□□ 0.83
EDEM3-206ENST00000474725 RFPL1O75677 317 aa20.25■□□□□ 0.83
EDEM3-206ENST00000474725 SRFP11831 508 aa20.25■□□□□ 0.83
EDEM3-206ENST00000474725 XPAP23025 273 aaPredicted RBP20.25■□□□□ 0.83
EDEM3-206ENST00000474725 PTSQ03393 145 aa20.25■□□□□ 0.83
EDEM3-206ENST00000474725 GRSF1Q12849 480 aaKnown RBP eCLIP20.25■□□□□ 0.83
EDEM3-206ENST00000474725 PEX6Q13608 980 aa20.25■□□□□ 0.83
EDEM3-206ENST00000474725 SEMA3AQ14563 771 aa20.25■□□□□ 0.83
EDEM3-206ENST00000474725 TIFABQ6ZNK6 161 aa20.25■□□□□ 0.83
EDEM3-206ENST00000474725 KIAA0408Q6ZU52 694 aa20.25■□□□□ 0.83
EDEM3-206ENST00000474725 LMNTD2Q8IXW0 634 aa20.25■□□□□ 0.83
EDEM3-206ENST00000474725 DCLK2Q8N568 766 aa20.25■□□□□ 0.83
EDEM3-206ENST00000474725 GPR150Q8NGU9 434 aa20.25■□□□□ 0.83
EDEM3-206ENST00000474725 MDM1Q8TC05 714 aa20.25■□□□□ 0.83
EDEM3-206ENST00000474725 VPS39Q96JC1 886 aa20.25■□□□□ 0.83
EDEM3-206ENST00000474725 RHOJQ9H4E5 214 aa20.25■□□□□ 0.83
EDEM3-206ENST00000474725 SHISA7A6NL88 538 aa20.25■□□□□ 0.83
EDEM3-206ENST00000474725 PYGBP11216 843 aa20.25■□□□□ 0.83
EDEM3-206ENST00000474725 CYP2A6P11509 494 aaPredicted RBP20.25■□□□□ 0.83
EDEM3-206ENST00000474725 DRD1P21728 446 aa20.25■□□□□ 0.83
EDEM3-206ENST00000474725 VIPR1P32241 457 aa20.25■□□□□ 0.83
EDEM3-206ENST00000474725 XIAPP98170 497 aa20.25■□□□□ 0.83
EDEM3-206ENST00000474725 SLC44A4Q53GD3 710 aa20.25■□□□□ 0.83
EDEM3-206ENST00000474725 FASTKD1Q53R41 847 aaKnown RBP20.25■□□□□ 0.83
EDEM3-206ENST00000474725 SH2D5Q6ZV89 423 aa20.25■□□□□ 0.83
EDEM3-206ENST00000474725 ARFGAP2Q8N6H7 521 aa20.25■□□□□ 0.83
EDEM3-206ENST00000474725 ACVR1CQ8NER5 493 aa20.25■□□□□ 0.83
EDEM3-206ENST00000474725 SLC2A4RGQ9NR83 387 aa20.25■□□□□ 0.83
EDEM3-206ENST00000474725 S1PR4O95977 384 aa20.24■□□□□ 0.83
EDEM3-206ENST00000474725 GLULP15104 373 aa20.24■□□□□ 0.83
EDEM3-206ENST00000474725 BPIP17213 487 aa20.24■□□□□ 0.83
EDEM3-206ENST00000474725 ITGB7P26010 798 aa20.24■□□□□ 0.83
EDEM3-206ENST00000474725 FOXN2P32314 431 aa20.24■□□□□ 0.83
EDEM3-206ENST00000474725 LEPRP48357 1165 aaKnown RBP20.24■□□□□ 0.83
EDEM3-206ENST00000474725 CD151P48509 253 aa20.24■□□□□ 0.83
EDEM3-206ENST00000474725 CDKN1CP49918 316 aaPredicted RBP20.24■□□□□ 0.83
EDEM3-206ENST00000474725 MPP2Q14168 576 aa20.24■□□□□ 0.83
EDEM3-206ENST00000474725 MRNIPQ6NTE8 343 aa20.24■□□□□ 0.83
EDEM3-206ENST00000474725 CNSTQ6PJW8 725 aa20.24■□□□□ 0.83
EDEM3-206ENST00000474725 DSG4Q86SJ6 1040 aa20.24■□□□□ 0.83
EDEM3-206ENST00000474725 PBXIP1Q96AQ6 731 aa20.24■□□□□ 0.83
EDEM3-206ENST00000474725 SGSM3Q96HU1 749 aa20.24■□□□□ 0.83
EDEM3-206ENST00000474725 FAM96AQ9H5X1 160 aa20.24■□□□□ 0.83
EDEM3-206ENST00000474725 PRUNE2Q8WUY3 3088 aa20.24■□□□□ 0.83
EDEM3-206ENST00000474725 TMEM120BA0PK00 339 aa20.23■□□□□ 0.83
EDEM3-206ENST00000474725 PLK4O00444 970 aa20.23■□□□□ 0.83
EDEM3-206ENST00000474725 ALDOAP04075 364 aaKnown RBP20.23■□□□□ 0.83
EDEM3-206ENST00000474725 C1SP09871 688 aa20.23■□□□□ 0.83
EDEM3-206ENST00000474725 NTSR1P30989 418 aa20.23■□□□□ 0.83
EDEM3-206ENST00000474725 PSMD8P48556 350 aa20.23■□□□□ 0.83
EDEM3-206ENST00000474725 GNGT1P63211 74 aa20.23■□□□□ 0.83
EDEM3-206ENST00000474725 SLC18A2Q05940 514 aa20.23■□□□□ 0.83
EDEM3-206ENST00000474725 DNAJC3Q13217 504 aa20.23■□□□□ 0.83
EDEM3-206ENST00000474725 CAMK2GQ13555 558 aaPredicted RBP20.23■□□□□ 0.83
EDEM3-206ENST00000474725 ZRANB3Q5FWF4 1079 aa20.23■□□□□ 0.83
EDEM3-206ENST00000474725 IL17RCQ8NAC3 791 aa20.23■□□□□ 0.83
EDEM3-206ENST00000474725 C19orf43Q9BQ61 176 aa20.23■□□□□ 0.83
EDEM3-206ENST00000474725 GOLGA8CPA6NN73 597 aa20.23■□□□□ 0.83
EDEM3-206ENST00000474725 C1QTNF3-AMACRE9PGA6 284 aa20.23■□□□□ 0.83
EDEM3-206ENST00000474725 TPP1O14773 563 aa20.23■□□□□ 0.83
EDEM3-206ENST00000474725 SYNCRIPO60506 623 aaKnown RBP20.23■□□□□ 0.83
EDEM3-206ENST00000474725 OGNP20774 298 aaKnown RBP20.23■□□□□ 0.83
EDEM3-206ENST00000474725 ARHGEF7Q14155 803 aa20.23■□□□□ 0.83
EDEM3-206ENST00000474725 RFLNAQ6ZTI6 216 aa20.23■□□□□ 0.83
EDEM3-206ENST00000474725 GALNT7Q86SF2 657 aa20.23■□□□□ 0.83
EDEM3-206ENST00000474725 SDCCAG8Q86SQ7 713 aaPredicted RBP20.23■□□□□ 0.83
EDEM3-206ENST00000474725 KCNV2Q8TDN2 545 aa20.23■□□□□ 0.83
EDEM3-206ENST00000474725 PPP1R16AQ96I34 528 aa20.23■□□□□ 0.83
EDEM3-206ENST00000474725 GPR22Q99680 433 aa20.23■□□□□ 0.83
EDEM3-206ENST00000474725 CAB39LQ9H9S4 337 aa20.23■□□□□ 0.83
EDEM3-206ENST00000474725 BPTFQ12830 3046 aa20.22■□□□□ 0.83
EDEM3-206ENST00000474725 GAPDHSO14556 408 aaPredicted RBP20.22■□□□□ 0.83
EDEM3-206ENST00000474725 KLF8O95600 359 aaPredicted RBP20.22■□□□□ 0.83
EDEM3-206ENST00000474725 CD72P21854 359 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms