RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 DDX4Q9NQI0 724 aaKnown RBP3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 ZNF224Q9NZL3 707 aa3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 ABI3Q9P2A4 366 aa3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 ORC3Q9UBD5 711 aaPredicted RBP3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 SIX4Q9UIU6 781 aa3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 MTMR6Q9Y217 621 aa3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 VDAC3Q9Y277 283 aa3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 PCDHGB1Q9Y5G3 927 aa3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 KCNE2Q9Y6J6 123 aa3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 hDV102S1A0JD36 115 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 MAGEA13PA6NCF6 341 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 HCRTR2O43614 444 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 PLRG1O43660 514 aaKnown RBP3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 SH3BP5O60239 455 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 ACTN1P12814 892 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 LAMP2P13473 410 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 TMEM11P17152 192 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 EDN2P20800 178 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 UBA1P22314 1058 aaKnown RBP3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 PIGAP37287 484 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 USP8P40818 1118 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 CLNS1AP54105 237 aaKnown RBP3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 RPS3AP61247 264 aaKnown RBP3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 CSNK2A1P68400 391 aaPredicted RBP3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 MRPS34P82930 218 aaKnown RBP3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 BNC1Q01954 994 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 FOXM1Q08050 763 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 NIPAL4Q0D2K0 466 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 TMEM115Q12893 351 aaPredicted RBP3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 MYBPHQ13203 477 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 DHX34Q14147 1143 aaKnown RBP3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 EIF4A2Q14240 407 aaKnown RBP3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 NFATC4Q14934 902 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 TBCEQ15813 527 aaPredicted RBP3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 IZUMO4Q1ZYL8 232 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 MMEL1Q495T6 779 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 SOWAHCQ53LP3 525 aaPredicted RBP3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 TRNP1Q6NT89 227 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 PQLC2Q6ZP29 291 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 C4orf50Q6ZRC1 276 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 QSOX2Q6ZRP7 698 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 RBM23Q86U06 439 aaKnown RBP3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 EXOC3L1Q86VI1 746 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 TICAM1Q8IUC6 712 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 SPATA6LQ8N4H0 392 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 CSNK2A3Q8NEV1 391 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 CREB3L4Q8TEY5 395 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 SKA1Q96BD8 255 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 RRNAD1Q96FB5 475 aaKnown RBP3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 IGSF21Q96ID5 467 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 SEPT5Q99719 369 aaPredicted RBP3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 PCGF1Q9BSM1 259 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 HAUS8Q9BT25 410 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 CHMP4AQ9BY43 222 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 PPP1R3EQ9H7J1 279 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 KIF9Q9HAQ2 790 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 KRT84Q9NSB2 600 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 CWC15Q9P013 229 aaKnown RBP3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 AASSQ9UDR5 926 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 AMDHD2Q9Y303 409 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 LYVE1Q9Y5Y7 322 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 CEPT1Q9Y6K0 416 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 CAPN7Q9Y6W3 813 aa3.3□□□□□ -1.88
ECHDC1-213ENST00000474240 KANSL1LA0AUZ9 987 aa3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 PLSCR5A0PG75 271 aa3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 SERINC4A6NH21 518 aa3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 J3KR12 359 aa3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 NDUFS7O75251 213 aa3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 JRKO75564 520 aa3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 SEC31AO94979 1220 aaKnown RBP3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 CD4P01730 458 aa3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 EIF2S1P05198 315 aaKnown RBP3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 ACADMP11310 421 aa3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 ZNF12P17014 697 aa3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 MCM3P25205 808 aa3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 TNFRSF8P28908 595 aa3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 PRCPP42785 496 aa3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 ARF3P61204 181 aaPredicted RBP3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 ARF1P84077 181 aaKnown RBP3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 SETQ01105 290 aaPredicted RBP3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 TROAPQ12815 778 aa3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 DLG1Q12959 904 aa3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 GRIK2Q13002 908 aa3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 CRYMQ14894 314 aa3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 EFNB3Q15768 340 aa3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 ALG11Q2TAA5 492 aa3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 MYLK3Q32MK0 819 aa3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 ZNF585BQ52M93 769 aa3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 SLC45A4Q5BKX6 768 aa3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 C9orf57Q5W0N0 161 aa3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 SPSB3Q6PJ21 355 aa3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 B3GNT6Q6ZMB0 384 aa3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 C18orf65Q6ZTR6 163 aa3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 DPPA4Q7L190 304 aa3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 EPHX4Q8IUS5 362 aa3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 ZNF114Q8NC26 417 aa3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 THAP6Q8TBB0 222 aa3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 PABPC5Q96DU9 382 aaKnown RBP3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 MMABQ96EY8 250 aaPredicted RBP3.29□□□□□ -1.88
ECHDC1-213ENST00000474240 TREX2Q9BQ50 279 aaPredicted RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms