RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 CRLS1Q9UJA2 301 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 ZNF180Q9UJW8 692 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 CKAP5Q14008 2032 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 ZCWPW2A0A1B0GU75 182 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 UBA6A0AVT1 1052 aaPredicted RBP10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 FAM170BA6NMN3 283 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 H0Y858 1186 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 MID1O15344 667 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 CD3EAPO15446 510 aaKnown RBP10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 PRAMEF1O95521 474 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 GOT2P00505 430 aaKnown RBP10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 MT-ND3P03897 115 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 SNRPAP09012 282 aaKnown RBP10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 TIMP2P16035 220 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 OGNP20774 298 aaKnown RBP10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 MMP12P39900 470 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 CD151P48509 253 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 PTPN5P54829 565 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 CACNG1Q06432 222 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 CCINQ13939 588 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 IHHQ14623 411 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 AGBL2Q5U5Z8 902 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 TRMT10BQ6PF06 316 aaKnown RBP10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 CRTC1Q6UUV9 634 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 FAM151BQ6UXP7 276 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 TDRPQ86YL5 185 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 TMPRSS6Q8IU80 811 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 GJD3Q8N144 294 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 ARFGAP2Q8N6H7 521 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 FLCNQ8NFG4 579 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 TSTD1Q8NFU3 115 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 GDAP1Q8TB36 358 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 HMGB4Q8WW32 186 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 SLC44A1Q8WWI5 657 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 ARRDC3Q96B67 414 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 ULK4Q96C45 1275 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 PGM2Q96G03 612 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 CDKN2AIPNLQ96HQ2 116 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 ATP6V1G3Q96LB4 118 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 TBATAQ96M53 351 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 NSMCE3Q96MG7 304 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 ZNF778Q96MU6 729 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 FCRL3Q96P31 734 aaPredicted RBP10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 PLEKHG4BQ96PX9 1271 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 SMC6Q96SB8 1091 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 FAM129BQ96TA1 746 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 WRAP53Q9BUR4 548 aaKnown RBP10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 SPATA16Q9BXB7 569 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 EPB41L4BQ9H329 900 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 TBC1D17Q9HA65 648 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 FBXL12Q9NXK8 326 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 MOCS1Q9NZB8 636 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 IL1RAPL1Q9NZN1 696 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 FKBPLQ9UIM3 349 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 SARDHQ9UL12 918 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 PPIL1Q9Y3C6 166 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 KCTD3Q9Y597 815 aa10.26□□□□□ -0.77
PRPF38A-202ENST00000474048 A0A1W2PP55 124 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 CCDC162PA2VCL2 907 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 RGSL1A5PLK6 1076 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 C19orf67A6NJJ6 358 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 CFAP99D6REC4 459 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 GOLGA8TH3BQL2 631 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 CCL22O00626 93 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 WNT9AO14904 365 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 AURKAO14965 403 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 TSPAN6O43657 245 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 PYGLP06737 847 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 RALBP11234 206 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 P2RY2P41231 377 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 SLC1A2P43004 574 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 SERPINB8P50452 374 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 STARD6P59095 220 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 RPS14P62263 151 aaKnown RBP10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 ACVR1Q04771 509 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 CNTN1Q12860 1018 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 RASA2Q15283 850 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 SETMARQ53H47 684 aaPredicted RBP10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 TAF1BQ53T94 588 aaPredicted RBP10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 ADGRD1Q6QNK2 874 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 PACS1Q6VY07 963 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 CERS6Q6ZMG9 384 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 RAPH1Q70E73 1250 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 TSPAN33Q86UF1 283 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 ZSWIM9Q86XI8 627 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 KRT222Q8N1A0 295 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 TTC30BQ8N4P2 665 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 GPATCH11Q8N954 259 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 OR13J1Q8NGT2 312 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 OR14C36Q8NHC7 312 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 SCG3Q8WXD2 468 aaKnown RBP10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 NUS1Q96E22 293 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 TSPAN17Q96FV3 270 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 DCUN1D1Q96GG9 259 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 ATXN7L3BQ96GX2 97 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 VPS39Q96JC1 886 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 TCF12Q99081 682 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 RBBP8Q99708 897 aa10.25□□□□□ -0.77
PRPF38A-202ENST00000474048 ASB8Q9H765 288 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms