RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 EPHB6O15197 1021 aa9.33□□□□□ -0.92
VCL-204ENST00000472585 RAD1O60671 282 aa9.33□□□□□ -0.92
VCL-204ENST00000472585 CEACAM5P06731 702 aa9.33□□□□□ -0.92
VCL-204ENST00000472585 UNGP13051 313 aaPredicted RBP9.33□□□□□ -0.92
VCL-204ENST00000472585 CCNB1P14635 433 aa9.33□□□□□ -0.92
VCL-204ENST00000472585 EPHB2P29323 1055 aa9.33□□□□□ -0.92
VCL-204ENST00000472585 SDC4P31431 198 aa9.33□□□□□ -0.92
VCL-204ENST00000472585 CSF2RBP32927 897 aa9.33□□□□□ -0.92
VCL-204ENST00000472585 SUOXP51687 545 aa9.33□□□□□ -0.92
VCL-204ENST00000472585 COPB1P53618 953 aaKnown RBP9.33□□□□□ -0.92
VCL-204ENST00000472585 LIMK2P53671 638 aa9.33□□□□□ -0.92
VCL-204ENST00000472585 YBEYP58557 167 aaPredicted RBP9.33□□□□□ -0.92
VCL-204ENST00000472585 MC1RQ01726 317 aa9.33□□□□□ -0.92
VCL-204ENST00000472585 RAD51Q06609 339 aa9.33□□□□□ -0.92
VCL-204ENST00000472585 CDC20Q12834 499 aa9.33□□□□□ -0.92
VCL-204ENST00000472585 CA9Q16790 459 aa9.33□□□□□ -0.92
VCL-204ENST00000472585 ZNF787Q6DD87 383 aa9.33□□□□□ -0.92
VCL-204ENST00000472585 CAPRIN2Q6IMN6 1127 aaKnown RBP9.33□□□□□ -0.92
VCL-204ENST00000472585 PNCKQ6P2M8 343 aa9.33□□□□□ -0.92
VCL-204ENST00000472585 ARHGAP36Q6ZRI8 547 aa9.33□□□□□ -0.92
VCL-204ENST00000472585 SLFN11Q7Z7L1 901 aa9.33□□□□□ -0.92
VCL-204ENST00000472585 SRLQ86TD4 932 aa9.33□□□□□ -0.92
VCL-204ENST00000472585 ZNF354CQ86Y25 554 aa9.33□□□□□ -0.92
VCL-204ENST00000472585 DNAAF5Q86Y56 855 aa9.33□□□□□ -0.92
VCL-204ENST00000472585 GALNT11Q8NCW6 608 aa9.33□□□□□ -0.92
VCL-204ENST00000472585 CELF6Q96J87 481 aaKnown RBP9.33□□□□□ -0.92
VCL-204ENST00000472585 ZNF641Q96N77 438 aaPredicted RBP9.33□□□□□ -0.92
VCL-204ENST00000472585 TUBGCP2Q9BSJ2 902 aa9.33□□□□□ -0.92
VCL-204ENST00000472585 STK33Q9BYT3 514 aa9.33□□□□□ -0.92
VCL-204ENST00000472585 ASPSCR1Q9BZE9 553 aa9.33□□□□□ -0.92
VCL-204ENST00000472585 SLC39A8Q9C0K1 460 aa9.33□□□□□ -0.92
VCL-204ENST00000472585 GANQ9H2C0 597 aa9.33□□□□□ -0.92
VCL-204ENST00000472585 PRDM8Q9NQV8 689 aa9.33□□□□□ -0.92
VCL-204ENST00000472585 CUEDC1Q9NWM3 386 aaPredicted RBP9.33□□□□□ -0.92
VCL-204ENST00000472585 TAAR2Q9P1P5 351 aa9.33□□□□□ -0.92
VCL-204ENST00000472585 FZD10Q9ULW2 581 aa9.33□□□□□ -0.92
VCL-204ENST00000472585 TP53TG5Q9Y2B4 290 aa9.33□□□□□ -0.92
VCL-204ENST00000472585 PCDHGA3Q9Y5H0 932 aa9.33□□□□□ -0.92
VCL-204ENST00000472585 LOC101059948A0A1B0GTJ6 334 aa9.32□□□□□ -0.92
VCL-204ENST00000472585 PRSS38A1L453 326 aa9.32□□□□□ -0.92
VCL-204ENST00000472585 CFAP69A5D8W1 941 aa9.32□□□□□ -0.92
VCL-204ENST00000472585 TTLL8A6PVC2 850 aa9.32□□□□□ -0.92
VCL-204ENST00000472585 MKRN2OSH3BPM6 223 aa9.32□□□□□ -0.92
VCL-204ENST00000472585 TEX33O43247 280 aa9.32□□□□□ -0.92
VCL-204ENST00000472585 CCP110O43303 1012 aa9.32□□□□□ -0.92
VCL-204ENST00000472585 CREB3O43889 395 aa9.32□□□□□ -0.92
VCL-204ENST00000472585 PRAMEF11O60813 436 aa9.32□□□□□ -0.92
VCL-204ENST00000472585 GFPT2O94808 682 aa9.32□□□□□ -0.92
VCL-204ENST00000472585 EML2O95834 649 aa9.32□□□□□ -0.92
VCL-204ENST00000472585 DDAH2O95865 285 aa9.32□□□□□ -0.92
VCL-204ENST00000472585 KRT3P12035 628 aa9.32□□□□□ -0.92
VCL-204ENST00000472585 XPAP23025 273 aaPredicted RBP9.32□□□□□ -0.92
VCL-204ENST00000472585 TNFRSF8P28908 595 aa9.32□□□□□ -0.92
VCL-204ENST00000472585 CSTF2P33240 577 aaKnown RBP eCLIP9.32□□□□□ -0.92
VCL-204ENST00000472585 NOP2P46087 812 aaKnown RBP9.32□□□□□ -0.92
VCL-204ENST00000472585 PAPOLAP51003 745 aaKnown RBP9.32□□□□□ -0.92
VCL-204ENST00000472585 RPL7AP62424 266 aaKnown RBP9.32□□□□□ -0.92
VCL-204ENST00000472585 CDR2Q01850 454 aa9.32□□□□□ -0.92
VCL-204ENST00000472585 OGDHQ02218 1023 aa9.32□□□□□ -0.92
VCL-204ENST00000472585 BIRC2Q13490 618 aa9.32□□□□□ -0.92
VCL-204ENST00000472585 SQSTM1Q13501 440 aa9.32□□□□□ -0.92
VCL-204ENST00000472585 C16orf46Q6P387 395 aa9.32□□□□□ -0.92
VCL-204ENST00000472585 BRAT1Q6PJG6 821 aa9.32□□□□□ -0.92
VCL-204ENST00000472585 RFLNAQ6ZTI6 216 aa9.32□□□□□ -0.92
VCL-204ENST00000472585 TIPARPQ7Z3E1 657 aaKnown RBP9.32□□□□□ -0.92
VCL-204ENST00000472585 FAM114A1Q8IWE2 563 aa9.32□□□□□ -0.92
VCL-204ENST00000472585 ARHGAP12Q8IWW6 846 aa9.32□□□□□ -0.92
VCL-204ENST00000472585 NRSN1Q8IZ57 195 aa9.32□□□□□ -0.92
VCL-204ENST00000472585 UNC5BQ8IZJ1 945 aa9.32□□□□□ -0.92
VCL-204ENST00000472585 ARFGAP1Q8N6T3 406 aa9.32□□□□□ -0.92
VCL-204ENST00000472585 BMPERQ8N8U9 685 aa9.32□□□□□ -0.92
VCL-204ENST00000472585 ZDHHC1Q8WTX9 485 aa9.32□□□□□ -0.92
VCL-204ENST00000472585 ART4Q93070 314 aa9.32□□□□□ -0.92
VCL-204ENST00000472585 COQ10AQ96MF6 247 aa9.32□□□□□ -0.92
VCL-204ENST00000472585 TEX101Q9BY14 249 aa9.32□□□□□ -0.92
VCL-204ENST00000472585 SUDS3Q9H7L9 328 aaPredicted RBP9.32□□□□□ -0.92
VCL-204ENST00000472585 CARS2Q9HA77 564 aaKnown RBP9.32□□□□□ -0.92
VCL-204ENST00000472585 SAMSN1Q9NSI8 373 aaKnown RBP9.32□□□□□ -0.92
VCL-204ENST00000472585 GPATCH2LQ9NWQ4 482 aa9.32□□□□□ -0.92
VCL-204ENST00000472585 UBA2Q9UBT2 640 aaPredicted RBP9.32□□□□□ -0.92
VCL-204ENST00000472585 MOSPD1Q9UJG1 213 aa9.32□□□□□ -0.92
VCL-204ENST00000472585 PILRAQ9UKJ1 303 aa9.32□□□□□ -0.92
VCL-204ENST00000472585 PCYT1BQ9Y5K3 369 aaPredicted RBP9.32□□□□□ -0.92
VCL-204ENST00000472585 SETD2Q9BYW2 2564 aaPredicted RBP9.31□□□□□ -0.92
VCL-204ENST00000472585 HIVEP3Q5T1R4 2406 aa9.31□□□□□ -0.92
VCL-204ENST00000472585 IGHV1OR21-1A0A087WYE8 117 aa9.31□□□□□ -0.92
VCL-204ENST00000472585 SIGLEC16A6NMB1 481 aa9.31□□□□□ -0.92
VCL-204ENST00000472585 RHPN2P1A8MT19 583 aa9.31□□□□□ -0.92
VCL-204ENST00000472585 CACNB4O00305 520 aaPredicted RBP9.31□□□□□ -0.92
VCL-204ENST00000472585 THRAP10827 490 aa9.31□□□□□ -0.92
VCL-204ENST00000472585 PRKCSHP14314 528 aaPredicted RBP9.31□□□□□ -0.92
VCL-204ENST00000472585 TCN2P20062 427 aa9.31□□□□□ -0.92
VCL-204ENST00000472585 TNFAIP3P21580 790 aa9.31□□□□□ -0.92
VCL-204ENST00000472585 GPD1P21695 349 aa9.31□□□□□ -0.92
VCL-204ENST00000472585 MAP4P27816 1152 aaKnown RBP9.31□□□□□ -0.92
VCL-204ENST00000472585 DCTP40126 519 aa9.31□□□□□ -0.92
VCL-204ENST00000472585 STAT1P42224 750 aa9.31□□□□□ -0.92
VCL-204ENST00000472585 CSNK1DP48730 415 aa9.31□□□□□ -0.92
VCL-204ENST00000472585 JAM2P57087 298 aa9.31□□□□□ -0.92
VCL-204ENST00000472585 CTBSQ01459 385 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms