RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 BCL2A1Q16548 175 aa4.48□□□□□ -1.69
LMNB1-205ENST00000472034 MLANAQ16655 118 aa4.48□□□□□ -1.69
LMNB1-205ENST00000472034 GEN1Q17RS7 908 aa4.48□□□□□ -1.69
LMNB1-205ENST00000472034 SLC10A6Q3KNW5 377 aa4.48□□□□□ -1.69
LMNB1-205ENST00000472034 ZNF568Q3ZCX4 644 aa4.48□□□□□ -1.69
LMNB1-205ENST00000472034 LRRC23Q53EV4 343 aaPredicted RBP4.48□□□□□ -1.69
LMNB1-205ENST00000472034 C10orf62Q5T681 223 aaPredicted RBP4.48□□□□□ -1.69
LMNB1-205ENST00000472034 MZT2AQ6P582 158 aa4.48□□□□□ -1.69
LMNB1-205ENST00000472034 NCEH1Q6PIU2 408 aa4.48□□□□□ -1.69
LMNB1-205ENST00000472034 LVRNQ6Q4G3 990 aa4.48□□□□□ -1.69
LMNB1-205ENST00000472034 TPGS1Q6ZTW0 290 aa4.48□□□□□ -1.69
LMNB1-205ENST00000472034 B4GALNT4Q76KP1 1039 aa4.48□□□□□ -1.69
LMNB1-205ENST00000472034 EFL1Q7Z2Z2 1120 aaKnown RBP4.48□□□□□ -1.69
LMNB1-205ENST00000472034 ZBTB8OSQ8IWT0 167 aa4.48□□□□□ -1.69
LMNB1-205ENST00000472034 C10orf67Q8IYJ2 551 aa4.48□□□□□ -1.69
LMNB1-205ENST00000472034 RNF10Q8N5U6 811 aaKnown RBP4.48□□□□□ -1.69
LMNB1-205ENST00000472034 SYT2Q8N9I0 419 aaPredicted RBP4.48□□□□□ -1.69
LMNB1-205ENST00000472034 CCDC148Q8NFR7 591 aa4.48□□□□□ -1.69
LMNB1-205ENST00000472034 SPPL2BQ8TCT7 592 aa4.48□□□□□ -1.69
LMNB1-205ENST00000472034 BTN2A2Q8WVV5 523 aa4.48□□□□□ -1.69
LMNB1-205ENST00000472034 KCTD13Q8WZ19 329 aa4.48□□□□□ -1.69
LMNB1-205ENST00000472034 TRMT2BQ96GJ1 504 aaKnown RBP4.48□□□□□ -1.69
LMNB1-205ENST00000472034 INTS4Q96HW7 963 aaKnown RBP4.48□□□□□ -1.69
LMNB1-205ENST00000472034 RBM41Q96IZ5 413 aaKnown RBP4.48□□□□□ -1.69
LMNB1-205ENST00000472034 CCDC114Q96M63 670 aa4.48□□□□□ -1.69
LMNB1-205ENST00000472034 C5orf34Q96MH7 638 aa4.48□□□□□ -1.69
LMNB1-205ENST00000472034 RBM14Q96PK6 669 aaKnown RBP4.48□□□□□ -1.69
LMNB1-205ENST00000472034 SRPK1Q96SB4 655 aaKnown RBP4.48□□□□□ -1.69
LMNB1-205ENST00000472034 HERPUD2Q9BSE4 406 aa4.48□□□□□ -1.69
LMNB1-205ENST00000472034 LRRC2Q9BYS8 371 aa4.48□□□□□ -1.69
LMNB1-205ENST00000472034 BTBD1Q9H0C5 482 aa4.48□□□□□ -1.69
LMNB1-205ENST00000472034 NSRP1Q9H0G5 558 aaKnown RBP4.48□□□□□ -1.69
LMNB1-205ENST00000472034 SLKQ9H2G2 1235 aaPredicted RBP4.48□□□□□ -1.69
LMNB1-205ENST00000472034 SYNDIG1Q9H7V2 258 aa4.48□□□□□ -1.69
LMNB1-205ENST00000472034 EPB41L5Q9HCM4 733 aa4.48□□□□□ -1.69
LMNB1-205ENST00000472034 PRDM8Q9NQV8 689 aa4.48□□□□□ -1.69
LMNB1-205ENST00000472034 SPHK2Q9NRA0 654 aa4.48□□□□□ -1.69
LMNB1-205ENST00000472034 SEPT11Q9NVA2 429 aaKnown RBP4.48□□□□□ -1.69
LMNB1-205ENST00000472034 PLK2Q9NYY3 685 aa4.48□□□□□ -1.69
LMNB1-205ENST00000472034 LUZP4Q9P127 313 aa4.48□□□□□ -1.69
LMNB1-205ENST00000472034 UXTQ9UBK9 157 aaPredicted RBP4.48□□□□□ -1.69
LMNB1-205ENST00000472034 INTUQ9ULD6 942 aa4.48□□□□□ -1.69
LMNB1-205ENST00000472034 SNX8Q9Y5X2 465 aa4.48□□□□□ -1.69
LMNB1-205ENST00000472034 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.48□□□□□ -1.69
LMNB1-205ENST00000472034 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.48□□□□□ -1.69
LMNB1-205ENST00000472034 SCN1AP35498 2009 aa4.48□□□□□ -1.69
LMNB1-205ENST00000472034 PTPRJQ12913 1337 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.47□□□□□ -1.69
LMNB1-205ENST00000472034 ZNF840PA6NDX5 716 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 EFCAB7A8K855 629 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 LACTBL1A8MY62 500 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 PRSS44E7EML9 344 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 SH2B2O14492 632 aaPredicted RBP4.47□□□□□ -1.69
LMNB1-205ENST00000472034 CHUKO15111 745 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 CACNG3O60359 315 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 ZNF189O75820 626 aaPredicted RBP4.47□□□□□ -1.69
LMNB1-205ENST00000472034 CNOT4O95628 575 aaKnown RBP4.47□□□□□ -1.69
LMNB1-205ENST00000472034 OAS1P00973 400 aaKnown RBP4.47□□□□□ -1.69
LMNB1-205ENST00000472034 GP1BAP07359 652 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 CCDC166P0CW27 439 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 IRF1P10914 325 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 ODC1P11926 461 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 P4HA1P13674 534 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 ACAT1P24752 427 aaKnown RBP4.47□□□□□ -1.69
LMNB1-205ENST00000472034 LRPAP1P30533 357 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 CTNNA1P35221 906 aaKnown RBP4.47□□□□□ -1.69
LMNB1-205ENST00000472034 ECI1P42126 302 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 HTR3AP46098 478 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 MASP1P48740 699 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 MAPKAPK2P49137 400 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 GALCP54803 685 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 LILRA4P59901 499 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 RPS14P62263 151 aaKnown RBP4.47□□□□□ -1.69
LMNB1-205ENST00000472034 PPP2R2AP63151 447 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 LTBQ06643 244 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 HSPA14Q0VDF9 509 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 ZNF177Q13360 481 aaPredicted RBP4.47□□□□□ -1.69
LMNB1-205ENST00000472034 PPP2R5CQ13362 524 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 DYNC1I2Q13409 638 aaKnown RBP4.47□□□□□ -1.69
LMNB1-205ENST00000472034 TOMM20Q15388 145 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 DEFB109BQ30KR1 87 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 POM121L1PQ3SYA9 428 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 NADK2Q4G0N4 442 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 RILPL1Q5EBL4 403 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 ZNF542PQ5EBM4 170 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 ADGRF1Q5T601 910 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 INTS11Q5TA45 600 aaKnown RBP4.47□□□□□ -1.69
LMNB1-205ENST00000472034 WSCD1Q658N2 575 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 E4F1Q66K89 784 aaPredicted RBP4.47□□□□□ -1.69
LMNB1-205ENST00000472034 PPP4R4Q6NUP7 873 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 ERAP2Q6P179 960 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 DRICH1Q6PGQ1 229 aaPredicted RBP4.47□□□□□ -1.69
LMNB1-205ENST00000472034 ASB18Q6ZVZ8 466 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 RAB11FIP2Q7L804 512 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 GDF7Q7Z4P5 450 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 CCDC83Q8IWF9 413 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 SCN4BQ8IWT1 228 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 TPH2Q8IWU9 490 aa4.47□□□□□ -1.69
LMNB1-205ENST00000472034 FANCBQ8NB91 859 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms