RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 POLR1EQ9GZS1 481 aaKnown RBP22.52■■□□□ 1.2
C9orf3-213ENST00000471978 LRIT1Q9P2V4 623 aa22.52■■□□□ 1.2
C9orf3-213ENST00000471978 NENFQ9UMX5 172 aa22.52■■□□□ 1.2
C9orf3-213ENST00000471978 PPIL1Q9Y3C6 166 aa22.52■■□□□ 1.2
C9orf3-213ENST00000471978 RNF215Q9Y6U7 377 aa22.52■■□□□ 1.2
C9orf3-213ENST00000471978 PLD2O14939 933 aa22.51■■□□□ 1.19
C9orf3-213ENST00000471978 PROSCO94903 275 aa22.51■■□□□ 1.19
C9orf3-213ENST00000471978 PRB1P04280 392 aa22.51■■□□□ 1.19
C9orf3-213ENST00000471978 ITGA2BP08514 1039 aa22.51■■□□□ 1.19
C9orf3-213ENST00000471978 PDHA1P08559 390 aa22.51■■□□□ 1.19
C9orf3-213ENST00000471978 KRT10P13645 584 aa22.51■■□□□ 1.19
C9orf3-213ENST00000471978 CCNB1P14635 433 aa22.51■■□□□ 1.19
C9orf3-213ENST00000471978 PNLIPP16233 465 aa22.51■■□□□ 1.19
C9orf3-213ENST00000471978 CDK3Q00526 305 aa22.51■■□□□ 1.19
C9orf3-213ENST00000471978 EIF3IQ13347 325 aaKnown RBP22.51■■□□□ 1.19
C9orf3-213ENST00000471978 HLTFQ14527 1009 aaKnown RBP eCLIP22.51■■□□□ 1.19
C9orf3-213ENST00000471978 ANKRD20A8PQ5CZ79 823 aa22.51■■□□□ 1.19
C9orf3-213ENST00000471978 ARHGAP40Q5TG30 622 aa22.51■■□□□ 1.19
C9orf3-213ENST00000471978 RAET1GQ6H3X3 334 aa22.51■■□□□ 1.19
C9orf3-213ENST00000471978 TIGD7Q6NT04 549 aaPredicted RBP22.51■■□□□ 1.19
C9orf3-213ENST00000471978 RAB11FIP2Q7L804 512 aa22.51■■□□□ 1.19
C9orf3-213ENST00000471978 CLEC14AQ86T13 490 aa22.51■■□□□ 1.19
C9orf3-213ENST00000471978 KIAA1524Q8TCG1 905 aa22.51■■□□□ 1.19
C9orf3-213ENST00000471978 GPBAR1Q8TDU6 330 aa22.51■■□□□ 1.19
C9orf3-213ENST00000471978 TMEM74Q96NL1 305 aa22.51■■□□□ 1.19
C9orf3-213ENST00000471978 FRMD8Q9BZ67 464 aaPredicted RBP22.51■■□□□ 1.19
C9orf3-213ENST00000471978 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.51■■□□□ 1.19
C9orf3-213ENST00000471978 A0A0U1RQS6 177 aa22.5■■□□□ 1.19
C9orf3-213ENST00000471978 MATN3O15232 486 aa22.5■■□□□ 1.19
C9orf3-213ENST00000471978 FZD6O60353 706 aa22.5■■□□□ 1.19
C9orf3-213ENST00000471978 MAP3K6O95382 1288 aa22.5■■□□□ 1.19
C9orf3-213ENST00000471978 FUCA1P04066 466 aa22.5■■□□□ 1.19
C9orf3-213ENST00000471978 GNPDA1P46926 289 aa22.5■■□□□ 1.19
C9orf3-213ENST00000471978 ILF3Q12906 894 aaKnown RBP eCLIP22.5■■□□□ 1.19
C9orf3-213ENST00000471978 PDK2Q15119 407 aa22.5■■□□□ 1.19
C9orf3-213ENST00000471978 IFI16Q16666 785 aaKnown RBP22.5■■□□□ 1.19
C9orf3-213ENST00000471978 SPRED1Q7Z699 444 aa22.5■■□□□ 1.19
C9orf3-213ENST00000471978 TECPR1Q7Z6L1 1165 aa22.5■■□□□ 1.19
C9orf3-213ENST00000471978 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.5■■□□□ 1.19
C9orf3-213ENST00000471978 LSM14AQ8ND56 463 aaKnown RBP22.5■■□□□ 1.19
C9orf3-213ENST00000471978 CTNNBL1Q8WYA6 563 aaPredicted RBP22.5■■□□□ 1.19
C9orf3-213ENST00000471978 MAML1Q92585 1016 aa22.5■■□□□ 1.19
C9orf3-213ENST00000471978 ZNF670Q9BS34 389 aa22.5■■□□□ 1.19
C9orf3-213ENST00000471978 GSDMCQ9BYG8 508 aa22.5■■□□□ 1.19
C9orf3-213ENST00000471978 XPO4Q9C0E2 1151 aaKnown RBP22.5■■□□□ 1.19
C9orf3-213ENST00000471978 SPATS2LQ9NUQ6 558 aaKnown RBP22.5■■□□□ 1.19
C9orf3-213ENST00000471978 UVRAGQ9P2Y5 699 aa22.5■■□□□ 1.19
C9orf3-213ENST00000471978 ATXN7L1Q9ULK2 861 aaPredicted RBP22.5■■□□□ 1.19
C9orf3-213ENST00000471978 SUFUQ9UMX1 484 aa22.5■■□□□ 1.19
C9orf3-213ENST00000471978 NUDT21O43809 227 aaKnown RBP22.49■■□□□ 1.19
C9orf3-213ENST00000471978 TPM3P06753 285 aa22.49■■□□□ 1.19
C9orf3-213ENST00000471978 H2AFZP0C0S5 128 aa22.49■■□□□ 1.19
C9orf3-213ENST00000471978 CES1P23141 567 aa22.49■■□□□ 1.19
C9orf3-213ENST00000471978 TEAD1P28347 426 aa22.49■■□□□ 1.19
C9orf3-213ENST00000471978 HNRNPH3P31942 346 aaKnown RBP22.49■■□□□ 1.19
C9orf3-213ENST00000471978 CCKBRP32239 447 aa22.49■■□□□ 1.19
C9orf3-213ENST00000471978 UGT1A5P35504 534 aa22.49■■□□□ 1.19
C9orf3-213ENST00000471978 TAS2R40P59535 323 aa22.49■■□□□ 1.19
C9orf3-213ENST00000471978 DPTQ07507 201 aa22.49■■□□□ 1.19
C9orf3-213ENST00000471978 LRRC66Q68CR7 880 aa22.49■■□□□ 1.19
C9orf3-213ENST00000471978 H2AFVQ71UI9 128 aa22.49■■□□□ 1.19
C9orf3-213ENST00000471978 NRROSQ86YC3 692 aa22.49■■□□□ 1.19
C9orf3-213ENST00000471978 MAP7D3Q8IWC1 876 aa22.49■■□□□ 1.19
C9orf3-213ENST00000471978 PTCD2Q8WV60 388 aaKnown RBP22.49■■□□□ 1.19
C9orf3-213ENST00000471978 SMIM14Q96QK8 99 aa22.49■■□□□ 1.19
C9orf3-213ENST00000471978 PACSIN1Q9BY11 444 aa22.49■■□□□ 1.19
C9orf3-213ENST00000471978 RBM22Q9NW64 420 aaKnown RBP eCLIP22.49■■□□□ 1.191e-10■■■□□ 17.4
C9orf3-213ENST00000471978 TRNAU1APQ9NX07 287 aaKnown RBP22.49■■□□□ 1.19
C9orf3-213ENST00000471978 CD84Q9UIB8 345 aa22.49■■□□□ 1.19
C9orf3-213ENST00000471978 TTLL3Q9Y4R7 772 aa22.49■■□□□ 1.19
C9orf3-213ENST00000471978 KRT7P08729 469 aa22.48■■□□□ 1.19
C9orf3-213ENST00000471978 HGFP14210 728 aa22.48■■□□□ 1.19
C9orf3-213ENST00000471978 CCNCP24863 283 aa22.48■■□□□ 1.19
C9orf3-213ENST00000471978 GPR1P46091 355 aa22.48■■□□□ 1.19
C9orf3-213ENST00000471978 POLD2P49005 469 aa22.48■■□□□ 1.19
C9orf3-213ENST00000471978 EPHB1P54762 984 aa22.48■■□□□ 1.19
C9orf3-213ENST00000471978 DSC2Q02487 901 aa22.48■■□□□ 1.19
C9orf3-213ENST00000471978 SLC18A3Q16572 532 aa22.48■■□□□ 1.19
C9orf3-213ENST00000471978 ZSCAN23Q3MJ62 389 aa22.48■■□□□ 1.19
C9orf3-213ENST00000471978 ALG1LQ6GMV1 187 aa22.48■■□□□ 1.19
C9orf3-213ENST00000471978 RFLNAQ6ZTI6 216 aa22.48■■□□□ 1.19
C9orf3-213ENST00000471978 ZDHHC1Q8WTX9 485 aa22.48■■□□□ 1.19
C9orf3-213ENST00000471978 FATE1Q969F0 183 aa22.48■■□□□ 1.19
C9orf3-213ENST00000471978 AP2M1Q96CW1 435 aa22.48■■□□□ 1.19
C9orf3-213ENST00000471978 TSGA13Q96PP4 275 aa22.48■■□□□ 1.19
C9orf3-213ENST00000471978 HAUS2Q9NVX0 235 aa22.48■■□□□ 1.19
C9orf3-213ENST00000471978 TAAR2Q9P1P5 351 aa22.48■■□□□ 1.19
C9orf3-213ENST00000471978 AMACRQ9UHK6 382 aa22.48■■□□□ 1.19
C9orf3-213ENST00000471978 LCMT1Q9UIC8 334 aa22.48■■□□□ 1.19
C9orf3-213ENST00000471978 SLC17A4Q9Y2C5 497 aa22.48■■□□□ 1.19
C9orf3-213ENST00000471978 SSUH2Q9Y2M2 353 aa22.48■■□□□ 1.19
C9orf3-213ENST00000471978 A0A0J9YYE9 177 aa22.47■■□□□ 1.19
C9orf3-213ENST00000471978 TRBC1P01850 177 aa22.47■■□□□ 1.19
C9orf3-213ENST00000471978 FGF1P05230 155 aa22.47■■□□□ 1.19
C9orf3-213ENST00000471978 AK4P27144 223 aaPredicted RBP22.47■■□□□ 1.19
C9orf3-213ENST00000471978 MAZP56270 477 aaKnown RBP22.47■■□□□ 1.19
C9orf3-213ENST00000471978 PTSQ03393 145 aa22.47■■□□□ 1.19
C9orf3-213ENST00000471978 GBE1Q04446 702 aa22.47■■□□□ 1.19
C9orf3-213ENST00000471978 VAC14Q08AM6 782 aa22.47■■□□□ 1.19
C9orf3-213ENST00000471978 C19orf57Q0VDD7 668 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms