RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 TTPAP49638 278 aa10.62□□□□□ -0.71
APLF-204ENST00000471727 FASTKQ14296 549 aaKnown RBP10.62□□□□□ -0.71
APLF-204ENST00000471727 GALNT3Q14435 633 aa10.62□□□□□ -0.71
APLF-204ENST00000471727 VEPH1Q14D04 833 aa10.62□□□□□ -0.71
APLF-204ENST00000471727 TAF12Q16514 161 aa10.62□□□□□ -0.71
APLF-204ENST00000471727 DEFB115Q30KQ5 88 aa10.62□□□□□ -0.71
APLF-204ENST00000471727 MMEL1Q495T6 779 aa10.62□□□□□ -0.71
APLF-204ENST00000471727 SPATS1Q496A3 300 aa10.62□□□□□ -0.71
APLF-204ENST00000471727 TCHHL1Q5QJ38 904 aaPredicted RBP10.62□□□□□ -0.71
APLF-204ENST00000471727 PPM1LQ5SGD2 360 aa10.62□□□□□ -0.71
APLF-204ENST00000471727 RARS2Q5T160 578 aaKnown RBP10.62□□□□□ -0.71
APLF-204ENST00000471727 TMEM198Q66K66 360 aa10.62□□□□□ -0.71
APLF-204ENST00000471727 UGT3A1Q6NUS8 523 aa10.62□□□□□ -0.71
APLF-204ENST00000471727 LARP4Q71RC2 724 aaKnown RBP eCLIP10.62□□□□□ -0.71
APLF-204ENST00000471727 GLT6D1Q7Z4J2 308 aa10.62□□□□□ -0.71
APLF-204ENST00000471727 KBTBD2Q8IY47 623 aa10.62□□□□□ -0.71
APLF-204ENST00000471727 RNF168Q8IYW5 571 aaPredicted RBP10.62□□□□□ -0.71
APLF-204ENST00000471727 STK40Q8N2I9 435 aa10.62□□□□□ -0.71
APLF-204ENST00000471727 PQLC1Q8N2U9 271 aa10.62□□□□□ -0.71
APLF-204ENST00000471727 PCYOX1LQ8NBM8 494 aa10.62□□□□□ -0.71
APLF-204ENST00000471727 OR13C4Q8NGS5 318 aa10.62□□□□□ -0.71
APLF-204ENST00000471727 ZNF461Q8TAF7 563 aa10.62□□□□□ -0.71
APLF-204ENST00000471727 GDPD5Q8WTR4 605 aa10.62□□□□□ -0.71
APLF-204ENST00000471727 TSPEARQ8WU66 669 aa10.62□□□□□ -0.71
APLF-204ENST00000471727 ROPN1LQ96C74 230 aa10.62□□□□□ -0.71
APLF-204ENST00000471727 MOCOSQ96EN8 888 aa10.62□□□□□ -0.71
APLF-204ENST00000471727 B3GALT6Q96L58 329 aa10.62□□□□□ -0.71
APLF-204ENST00000471727 PPP1R36Q96LQ0 422 aa10.62□□□□□ -0.71
APLF-204ENST00000471727 CCT7Q99832 543 aa10.62□□□□□ -0.71
APLF-204ENST00000471727 TDRD1Q9BXT4 1180 aaKnown RBP10.62□□□□□ -0.71
APLF-204ENST00000471727 Q9H521 79 aa10.62□□□□□ -0.71
APLF-204ENST00000471727 AGO1Q9UL18 857 aaKnown RBP10.62□□□□□ -0.71
APLF-204ENST00000471727 MRPL42Q9Y6G3 142 aaKnown RBP10.62□□□□□ -0.71
APLF-204ENST00000471727 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.61□□□□□ -0.71
APLF-204ENST00000471727 TTC24A2A3L6 582 aaPredicted RBP10.61□□□□□ -0.71
APLF-204ENST00000471727 TYW5A2RUC4 315 aaKnown RBP10.61□□□□□ -0.71
APLF-204ENST00000471727 OR51F1A6NGY5 319 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 TMEM233B4DJY2 109 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 H3BNX3 289 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 STX16-NPEPL1H3BU86 382 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 STX16O14662 325 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 AZIN1O14977 448 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 CFLARO15519 480 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 COCHO43405 550 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 AOC2O75106 756 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 VPS26AO75436 327 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 SKAP2O75563 359 aaPredicted RBP10.61□□□□□ -0.71
APLF-204ENST00000471727 STC2O76061 302 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 SRP72O76094 671 aaKnown RBP10.61□□□□□ -0.71
APLF-204ENST00000471727 ABLIM3O94929 683 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 STAMBPO95630 424 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 SLC4A1P02730 911 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 JUNP05412 331 aaKnown RBP10.61□□□□□ -0.71
APLF-204ENST00000471727 PIM1P11309 404 aaPredicted RBP10.61□□□□□ -0.71
APLF-204ENST00000471727 UQCRBP14927 111 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 CDC25CP30307 473 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 CORO1AP31146 461 aaKnown RBP10.61□□□□□ -0.71
APLF-204ENST00000471727 HSPA13P48723 471 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 GATMP50440 423 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 SCNN1BP51168 640 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 THOP1P52888 689 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 ADARP55265 1226 aaKnown RBP10.61□□□□□ -0.71
APLF-204ENST00000471727 PSME3P61289 254 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 GRIK2Q13002 908 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 MED21Q13503 144 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 PEX6Q13608 980 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 CYTH1Q15438 398 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 TRIP10Q15642 601 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 PABPC1LQ4VXU2 614 aaKnown RBP10.61□□□□□ -0.71
APLF-204ENST00000471727 OGFRL1Q5TC84 451 aaPredicted RBP10.61□□□□□ -0.71
APLF-204ENST00000471727 IRAK1BP1Q5VVH5 260 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 ANKS6Q68DC2 871 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 KIAA1841Q6NSI8 718 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 PRMT9Q6P2P2 845 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 PRSS55Q6UWB4 352 aaPredicted RBP10.61□□□□□ -0.71
APLF-204ENST00000471727 TAS1R1Q7RTX1 841 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 LDB1Q86U70 411 aaPredicted RBP10.61□□□□□ -0.71
APLF-204ENST00000471727 DENND1CQ8IV53 801 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 CFAP52Q8N1V2 620 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 CHCHD4Q8N4Q1 142 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 PTGR2Q8N8N7 351 aaPredicted RBP10.61□□□□□ -0.71
APLF-204ENST00000471727 ICA1LQ8NDH6 482 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 ADCY4Q8NFM4 1077 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 LPGAT1Q92604 370 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 PTERQ96BW5 349 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 ASB9Q96DX5 294 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 MYEOVQ96EZ4 313 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 CAPNS2Q96L46 248 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 LRGUKQ96M69 825 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 ATOH8Q96SQ7 321 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 C1QTNF3Q9BXJ4 246 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 KLF16Q9BXK1 252 aaPredicted RBP10.61□□□□□ -0.71
APLF-204ENST00000471727 NUSAP1Q9BXS6 441 aaKnown RBP10.61□□□□□ -0.71
APLF-204ENST00000471727 UNKQ9C0B0 810 aaKnown RBP10.61□□□□□ -0.71
APLF-204ENST00000471727 SUDS3Q9H7L9 328 aaPredicted RBP10.61□□□□□ -0.71
APLF-204ENST00000471727 TMEM45AQ9NWC5 275 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 SUCOQ9UBS9 1254 aaKnown RBP10.61□□□□□ -0.71
APLF-204ENST00000471727 ADAMTS6Q9UKP5 1117 aa10.61□□□□□ -0.71
APLF-204ENST00000471727 ANKRD66B4E2M5 251 aa10.6□□□□□ -0.71
APLF-204ENST00000471727 NT5C1B-RDH14C9J2C7 533 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms