RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 TMEM8AQ9HCN3 771 aa9.42□□□□□ -0.9
APP-213ENST00000464867 ST7Q9NRC1 585 aa9.42□□□□□ -0.9
APP-213ENST00000464867 KBTBD4Q9NVX7 518 aa9.42□□□□□ -0.9
APP-213ENST00000464867 DCHS2Q6V1P9 2916 aa9.42□□□□□ -0.9
APP-213ENST00000464867 SYNJ2BP-COX16A0A087WUM0 186 aa9.41□□□□□ -0.9
APP-213ENST00000464867 M0QYV0 167 aa9.41□□□□□ -0.9
APP-213ENST00000464867 O00370 1275 aa9.41□□□□□ -0.9
APP-213ENST00000464867 TNFRSF10CO14798 259 aa9.41□□□□□ -0.9
APP-213ENST00000464867 AREL1O15033 823 aa9.41□□□□□ -0.9
APP-213ENST00000464867 SASH3O75995 380 aa9.41□□□□□ -0.9
APP-213ENST00000464867 RHOBTB3O94955 611 aa9.41□□□□□ -0.9
APP-213ENST00000464867 PCCBP05166 539 aa9.41□□□□□ -0.9
APP-213ENST00000464867 FGF1P05230 155 aa9.41□□□□□ -0.9
APP-213ENST00000464867 UGT2B4P06133 528 aa9.41□□□□□ -0.9
APP-213ENST00000464867 TRIM49P0CI25 452 aa9.41□□□□□ -0.9
APP-213ENST00000464867 TRIM49CP0CI26 452 aa9.41□□□□□ -0.9
APP-213ENST00000464867 CD1EP15812 388 aa9.41□□□□□ -0.9
APP-213ENST00000464867 CDK17Q00537 523 aa9.41□□□□□ -0.9
APP-213ENST00000464867 PLAURQ03405 335 aa9.41□□□□□ -0.9
APP-213ENST00000464867 PPP3CAQ08209 521 aa9.41□□□□□ -0.9
APP-213ENST00000464867 ILF3Q12906 894 aaKnown RBP eCLIP9.41□□□□□ -0.9
APP-213ENST00000464867 POLD3Q15054 466 aaPredicted RBP9.41□□□□□ -0.9
APP-213ENST00000464867 WSCD2Q2TBF2 565 aa9.41□□□□□ -0.9
APP-213ENST00000464867 NKAPLQ5M9Q1 402 aa9.41□□□□□ -0.9
APP-213ENST00000464867 C1orf220Q5T0J3 134 aa9.41□□□□□ -0.9
APP-213ENST00000464867 CNNM4Q6P4Q7 775 aa9.41□□□□□ -0.9
APP-213ENST00000464867 C17orf82Q86X59 251 aaPredicted RBP9.41□□□□□ -0.9
APP-213ENST00000464867 XYLT1Q86Y38 959 aa9.41□□□□□ -0.9
APP-213ENST00000464867 CISD2Q8N5K1 135 aaKnown RBP9.41□□□□□ -0.9
APP-213ENST00000464867 OR1E3Q8WZA6 343 aa9.41□□□□□ -0.9
APP-213ENST00000464867 KLHL32Q96NJ5 620 aa9.41□□□□□ -0.9
APP-213ENST00000464867 ING2Q9H160 280 aa9.41□□□□□ -0.9
APP-213ENST00000464867 POPDC2Q9HBU9 364 aa9.41□□□□□ -0.9
APP-213ENST00000464867 APMAPQ9HDC9 416 aa9.41□□□□□ -0.9
APP-213ENST00000464867 CHST11Q9NPF2 352 aa9.41□□□□□ -0.9
APP-213ENST00000464867 AGPAT4Q9NRZ5 378 aa9.41□□□□□ -0.9
APP-213ENST00000464867 SPATS2LQ9NUQ6 558 aaKnown RBP9.41□□□□□ -0.9
APP-213ENST00000464867 RAB20Q9NX57 234 aa9.41□□□□□ -0.9
APP-213ENST00000464867 COX16Q9P0S2 106 aa9.41□□□□□ -0.9
APP-213ENST00000464867 TMEM9Q9P0T7 183 aa9.41□□□□□ -0.9
APP-213ENST00000464867 TMEM63CQ9P1W3 806 aa9.41□□□□□ -0.9
APP-213ENST00000464867 PCDHGA6Q9Y5G7 932 aa9.41□□□□□ -0.9
APP-213ENST00000464867 COPG1Q9Y678 874 aaKnown RBP9.41□□□□□ -0.9
APP-213ENST00000464867 CLIC4Q9Y696 253 aa9.41□□□□□ -0.9
APP-213ENST00000464867 ANKRD36A6QL64 1941 aa9.41□□□□□ -0.9
APP-213ENST00000464867 A0A0D9SEW6 157 aa9.4□□□□□ -0.9
APP-213ENST00000464867 ARGFXA6NJG6 315 aa9.4□□□□□ -0.9
APP-213ENST00000464867 PDE2AO00408 941 aaPredicted RBP9.4□□□□□ -0.9
APP-213ENST00000464867 PDXKO00764 312 aa9.4□□□□□ -0.9
APP-213ENST00000464867 MAPK13O15264 365 aa9.4□□□□□ -0.9
APP-213ENST00000464867 CALUO43852 315 aaPredicted RBP9.4□□□□□ -0.9
APP-213ENST00000464867 ZG16O60844 167 aa9.4□□□□□ -0.9
APP-213ENST00000464867 ZNF821O75541 412 aaPredicted RBP9.4□□□□□ -0.9
APP-213ENST00000464867 POP4O95707 220 aaKnown RBP9.4□□□□□ -0.9
APP-213ENST00000464867 MT-ND3P03897 115 aa9.4□□□□□ -0.9
APP-213ENST00000464867 CCNB1P14635 433 aa9.4□□□□□ -0.9
APP-213ENST00000464867 BPIP17213 487 aa9.4□□□□□ -0.9
APP-213ENST00000464867 OR1E1P30953 314 aa9.4□□□□□ -0.9
APP-213ENST00000464867 GTF2H1P32780 548 aa9.4□□□□□ -0.9
APP-213ENST00000464867 CSF2RBP32927 897 aa9.4□□□□□ -0.9
APP-213ENST00000464867 IRAK1P51617 712 aa9.4□□□□□ -0.9
APP-213ENST00000464867 SNRPD1P62314 119 aaKnown RBP9.4□□□□□ -0.9
APP-213ENST00000464867 YWHAZP63104 245 aaKnown RBP9.4□□□□□ -0.9
APP-213ENST00000464867 RAD51Q06609 339 aa9.4□□□□□ -0.9
APP-213ENST00000464867 FOXM1Q08050 763 aa9.4□□□□□ -0.9
APP-213ENST00000464867 ELP6Q0PNE2 266 aa9.4□□□□□ -0.9
APP-213ENST00000464867 MTM1Q13496 603 aa9.4□□□□□ -0.9
APP-213ENST00000464867 ART3Q13508 389 aa9.4□□□□□ -0.9
APP-213ENST00000464867 DNASE1L3Q13609 305 aa9.4□□□□□ -0.9
APP-213ENST00000464867 STILQ15468 1287 aa9.4□□□□□ -0.9
APP-213ENST00000464867 VWA2Q5GFL6 755 aa9.4□□□□□ -0.9
APP-213ENST00000464867 LRRC73Q5JTD7 316 aa9.4□□□□□ -0.9
APP-213ENST00000464867 COX20Q5RI15 118 aa9.4□□□□□ -0.9
APP-213ENST00000464867 FOXR2Q6PJQ5 311 aa9.4□□□□□ -0.9
APP-213ENST00000464867 LRRC31Q6UY01 552 aa9.4□□□□□ -0.9
APP-213ENST00000464867 GDPD4Q6W3E5 623 aa9.4□□□□□ -0.9
APP-213ENST00000464867 IQUBQ8NA54 791 aa9.4□□□□□ -0.9
APP-213ENST00000464867 FBXL13Q8NEE6 735 aa9.4□□□□□ -0.9
APP-213ENST00000464867 OR6K2Q8NGY2 324 aa9.4□□□□□ -0.9
APP-213ENST00000464867 CCL4L1Q8NHW4 92 aa9.4□□□□□ -0.9
APP-213ENST00000464867 EEF2KMTQ96G04 330 aa9.4□□□□□ -0.9
APP-213ENST00000464867 MED15Q96RN5 788 aa9.4□□□□□ -0.9
APP-213ENST00000464867 SLC38A3Q99624 504 aa9.4□□□□□ -0.9
APP-213ENST00000464867 C7orf25Q9BPX7 421 aa9.4□□□□□ -0.9
APP-213ENST00000464867 TM6SF2Q9BZW4 377 aa9.4□□□□□ -0.9
APP-213ENST00000464867 SIK2Q9H0K1 926 aa9.4□□□□□ -0.9
APP-213ENST00000464867 DDIT4Q9NX09 232 aa9.4□□□□□ -0.9
APP-213ENST00000464867 PDP2Q9P2J9 529 aa9.4□□□□□ -0.9
APP-213ENST00000464867 PADI1Q9ULC6 663 aa9.4□□□□□ -0.9
APP-213ENST00000464867 A0A1B0GUH1 482 aa9.39□□□□□ -0.91
APP-213ENST00000464867 PVALEFA0A1B0GWK0 134 aa9.39□□□□□ -0.91
APP-213ENST00000464867 TMEM202A6NGA9 273 aa9.39□□□□□ -0.91
APP-213ENST00000464867 C21orf140B9A014 251 aa9.39□□□□□ -0.91
APP-213ENST00000464867 PPM1DO15297 605 aa9.39□□□□□ -0.91
APP-213ENST00000464867 STX10O60499 249 aa9.39□□□□□ -0.91
APP-213ENST00000464867 RGS9O75916 674 aaPredicted RBP9.39□□□□□ -0.91
APP-213ENST00000464867 IGLV3-25P01717 112 aa9.39□□□□□ -0.91
APP-213ENST00000464867 SNRPB2P08579 225 aaKnown RBP9.39□□□□□ -0.91
APP-213ENST00000464867 PDIA4P13667 645 aaKnown RBP9.39□□□□□ -0.91
APP-213ENST00000464867 BMP6P22004 513 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms