RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 LIFP15018 202 aa17.26■□□□□ 0.35
HMGN1-210ENST00000464078 NFKBIAP25963 317 aa17.26■□□□□ 0.35
HMGN1-210ENST00000464078 AK4P27144 223 aaPredicted RBP17.26■□□□□ 0.35
HMGN1-210ENST00000464078 VIPR1P32241 457 aa17.26■□□□□ 0.35
HMGN1-210ENST00000464078 HSPA9P38646 679 aaKnown RBP17.26■□□□□ 0.35
HMGN1-210ENST00000464078 GNPDA1P46926 289 aa17.26■□□□□ 0.35
HMGN1-210ENST00000464078 SCNN1BP51168 640 aa17.26■□□□□ 0.35
HMGN1-210ENST00000464078 ZNF135P52742 658 aaPredicted RBP17.26■□□□□ 0.35
HMGN1-210ENST00000464078 POLE2P56282 527 aa17.26■□□□□ 0.35
HMGN1-210ENST00000464078 TMCO4Q5TGY1 634 aa17.26■□□□□ 0.35
HMGN1-210ENST00000464078 SLC30A9Q6PML9 568 aa17.26■□□□□ 0.35
HMGN1-210ENST00000464078 ARHGAP36Q6ZRI8 547 aa17.26■□□□□ 0.35
HMGN1-210ENST00000464078 PSTKQ8IV42 348 aaKnown RBP17.26■□□□□ 0.35
HMGN1-210ENST00000464078 MCOLN2Q8IZK6 566 aa17.26■□□□□ 0.35
HMGN1-210ENST00000464078 IL22RA1Q8N6P7 574 aa17.26■□□□□ 0.35
HMGN1-210ENST00000464078 ART4Q93070 314 aa17.26■□□□□ 0.35
HMGN1-210ENST00000464078 SCARF2Q96GP6 870 aaPredicted RBP17.26■□□□□ 0.35
HMGN1-210ENST00000464078 CATSPER2Q96P56 530 aa17.26■□□□□ 0.35
HMGN1-210ENST00000464078 AGPAT1Q99943 283 aa17.26■□□□□ 0.35
HMGN1-210ENST00000464078 SNRNP25Q9BV90 132 aaKnown RBP17.26■□□□□ 0.35
HMGN1-210ENST00000464078 NUP62CLQ9H1M0 184 aa17.26■□□□□ 0.35
HMGN1-210ENST00000464078 DHX35Q9H5Z1 703 aaKnown RBP17.26■□□□□ 0.35
HMGN1-210ENST00000464078 SEPT11Q9NVA2 429 aaKnown RBP17.26■□□□□ 0.35
HMGN1-210ENST00000464078 PDP2Q9P2J9 529 aa17.26■□□□□ 0.35
HMGN1-210ENST00000464078 SUFUQ9UMX1 484 aa17.26■□□□□ 0.35
HMGN1-210ENST00000464078 B3GALT1Q9Y5Z6 326 aa17.26■□□□□ 0.35
HMGN1-210ENST00000464078 SPTBN1Q01082 2364 aaKnown RBP17.26■□□□□ 0.35
HMGN1-210ENST00000464078 A8MX80 341 aa17.25■□□□□ 0.35
HMGN1-210ENST00000464078 DFFAO00273 331 aa17.25■□□□□ 0.35
HMGN1-210ENST00000464078 PPM1DO15297 605 aa17.25■□□□□ 0.35
HMGN1-210ENST00000464078 ERCC2P18074 760 aa17.25■□□□□ 0.35
HMGN1-210ENST00000464078 CR2P20023 1033 aa17.25■□□□□ 0.35
HMGN1-210ENST00000464078 CSTF2P33240 577 aaKnown RBP eCLIP17.25■□□□□ 0.35
HMGN1-210ENST00000464078 FASLGP48023 281 aa17.25■□□□□ 0.35
HMGN1-210ENST00000464078 HCAR3P49019 387 aa17.25■□□□□ 0.35
HMGN1-210ENST00000464078 RAB15P59190 212 aa17.25■□□□□ 0.35
HMGN1-210ENST00000464078 GPLD1P80108 840 aa17.25■□□□□ 0.35
HMGN1-210ENST00000464078 CTBSQ01459 385 aa17.25■□□□□ 0.35
HMGN1-210ENST00000464078 DPTQ07507 201 aa17.25■□□□□ 0.35
HMGN1-210ENST00000464078 SLC10A7Q0GE19 358 aa17.25■□□□□ 0.35
HMGN1-210ENST00000464078 BIRC2Q13490 618 aa17.25■□□□□ 0.35
HMGN1-210ENST00000464078 ERMARDQ5T6L9 678 aa17.25■□□□□ 0.35
HMGN1-210ENST00000464078 PPP1R2P3Q6NXS1 205 aa17.25■□□□□ 0.35
HMGN1-210ENST00000464078 CYP4V2Q6ZWL3 525 aaPredicted RBP17.25■□□□□ 0.35
HMGN1-210ENST00000464078 LZTR1Q8N653 840 aa17.25■□□□□ 0.35
HMGN1-210ENST00000464078 NEK11Q8NG66 645 aa17.25■□□□□ 0.35
HMGN1-210ENST00000464078 PTCD2Q8WV60 388 aaKnown RBP17.25■□□□□ 0.35
HMGN1-210ENST00000464078 PATE1Q8WXA2 126 aa17.25■□□□□ 0.35
HMGN1-210ENST00000464078 MCCC1Q96RQ3 725 aaPredicted RBP17.25■□□□□ 0.35
HMGN1-210ENST00000464078 PEBP4Q96S96 227 aa17.25■□□□□ 0.35
HMGN1-210ENST00000464078 KCTD15Q96SI1 283 aaPredicted RBP17.25■□□□□ 0.35
HMGN1-210ENST00000464078 EPN3Q9H201 632 aa17.25■□□□□ 0.35
HMGN1-210ENST00000464078 UNC79Q9P2D8 2635 aa17.24■□□□□ 0.35
HMGN1-210ENST00000464078 CLEC18AA5D8T8 446 aa17.24■□□□□ 0.35
HMGN1-210ENST00000464078 ZNF891A8MT65 544 aaPredicted RBP17.24■□□□□ 0.35
HMGN1-210ENST00000464078 CPP00450 1065 aa17.24■□□□□ 0.35
HMGN1-210ENST00000464078 LHCGRP22888 699 aa17.24■□□□□ 0.35
HMGN1-210ENST00000464078 ADCY8P40145 1251 aa17.24■□□□□ 0.35
HMGN1-210ENST00000464078 ETV3P41162 512 aa17.24■□□□□ 0.35
HMGN1-210ENST00000464078 CCR10P46092 362 aa17.24■□□□□ 0.35
HMGN1-210ENST00000464078 MAMLD1Q13495 774 aa17.24■□□□□ 0.35
HMGN1-210ENST00000464078 DPYSQ14117 519 aa17.24■□□□□ 0.35
HMGN1-210ENST00000464078 LBRQ14739 615 aaKnown RBP17.24■□□□□ 0.35
HMGN1-210ENST00000464078 ACAD10Q6JQN1 1059 aa17.24■□□□□ 0.35
HMGN1-210ENST00000464078 CLEC18BQ6UXF7 455 aa17.24■□□□□ 0.35
HMGN1-210ENST00000464078 HSD11B1LQ7Z5J1 315 aa17.24■□□□□ 0.35
HMGN1-210ENST00000464078 CACNA2D3Q8IZS8 1091 aa17.24■□□□□ 0.35
HMGN1-210ENST00000464078 ARFGAP1Q8N6T3 406 aa17.24■□□□□ 0.35
HMGN1-210ENST00000464078 BMPERQ8N8U9 685 aa17.24■□□□□ 0.35
HMGN1-210ENST00000464078 CLEC18CQ8NCF0 446 aa17.24■□□□□ 0.35
HMGN1-210ENST00000464078 SLC45A3Q96JT2 553 aa17.24■□□□□ 0.35
HMGN1-210ENST00000464078 TEFMQ96QE5 360 aaKnown RBP17.24■□□□□ 0.35
HMGN1-210ENST00000464078 SYT11Q9BT88 431 aa17.24■□□□□ 0.35
HMGN1-210ENST00000464078 PARVAQ9NVD7 372 aa17.24■□□□□ 0.35
HMGN1-210ENST00000464078 UTP20O75691 2785 aaKnown RBP17.23■□□□□ 0.35
HMGN1-210ENST00000464078 LGALS16A8MUM7 142 aa17.23■□□□□ 0.35
HMGN1-210ENST00000464078 DAPK3O43293 454 aa17.23■□□□□ 0.35
HMGN1-210ENST00000464078 RAD1O60671 282 aa17.23■□□□□ 0.35
HMGN1-210ENST00000464078 PEX11BO96011 259 aa17.23■□□□□ 0.35
HMGN1-210ENST00000464078 CYP2A6P11509 494 aaPredicted RBP17.23■□□□□ 0.35
HMGN1-210ENST00000464078 PSMA2P25787 234 aa17.23■□□□□ 0.35
HMGN1-210ENST00000464078 CASRP41180 1078 aa17.23■□□□□ 0.35
HMGN1-210ENST00000464078 FOXK1P85037 733 aa17.23■□□□□ 0.35
HMGN1-210ENST00000464078 ZNF235Q14590 738 aa17.23■□□□□ 0.35
HMGN1-210ENST00000464078 RALGPS1Q5JS13 557 aa17.23■□□□□ 0.35
HMGN1-210ENST00000464078 DCAF12Q5T6F0 453 aa17.23■□□□□ 0.35
HMGN1-210ENST00000464078 NKAIN2Q5VXU1 208 aa17.23■□□□□ 0.35
HMGN1-210ENST00000464078 PLEKHA7Q6IQ23 1121 aa17.23■□□□□ 0.35
HMGN1-210ENST00000464078 TMEM71Q6P5X7 295 aa17.23■□□□□ 0.35
HMGN1-210ENST00000464078 FNIP1Q8TF40 1166 aa17.23■□□□□ 0.35
HMGN1-210ENST00000464078 OR2M4Q96R27 311 aa17.23■□□□□ 0.35
HMGN1-210ENST00000464078 ERGIC2Q96RQ1 377 aa17.23■□□□□ 0.35
HMGN1-210ENST00000464078 NUDCD1Q96RS6 583 aa17.23■□□□□ 0.35
HMGN1-210ENST00000464078 MGME1Q9BQP7 344 aa17.23■□□□□ 0.35
HMGN1-210ENST00000464078 SPRY4Q9C004 299 aa17.23■□□□□ 0.35
HMGN1-210ENST00000464078 SUDS3Q9H7L9 328 aaPredicted RBP17.23■□□□□ 0.35
HMGN1-210ENST00000464078 SLC39A1Q9NY26 324 aa17.23■□□□□ 0.35
HMGN1-210ENST00000464078 KCNK4Q9NYG8 393 aa17.23■□□□□ 0.35
HMGN1-210ENST00000464078 ANKMY1Q9P2S6 941 aa17.23■□□□□ 0.35
HMGN1-210ENST00000464078 ANAPC2Q9UJX6 822 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms