RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 TIGD7Q6NT04 549 aaPredicted RBP18.83■□□□□ 0.6
SF3A1-205ENST00000463818 RFLNAQ6ZTI6 216 aa18.83■□□□□ 0.6
SF3A1-205ENST00000463818 B3GNT8Q7Z7M8 397 aa18.83■□□□□ 0.6
SF3A1-205ENST00000463818 NRROSQ86YC3 692 aa18.83■□□□□ 0.6
SF3A1-205ENST00000463818 ARL14Q8N4G2 192 aa18.83■□□□□ 0.6
SF3A1-205ENST00000463818 PQLC3Q8N755 202 aa18.83■□□□□ 0.6
SF3A1-205ENST00000463818 GPBAR1Q8TDU6 330 aa18.83■□□□□ 0.6
SF3A1-205ENST00000463818 FRMD8Q9BZ67 464 aaPredicted RBP18.83■□□□□ 0.6
SF3A1-205ENST00000463818 DPH1Q9BZG8 443 aa18.83■□□□□ 0.6
SF3A1-205ENST00000463818 SPATS2LQ9NUQ6 558 aaKnown RBP18.83■□□□□ 0.6
SF3A1-205ENST00000463818 GOLGA6AQ9NYA3 693 aa18.83■□□□□ 0.6
SF3A1-205ENST00000463818 LRIT1Q9P2V4 623 aa18.83■□□□□ 0.6
SF3A1-205ENST00000463818 APPL1Q9UKG1 709 aa18.83■□□□□ 0.6
SF3A1-205ENST00000463818 PTPRQQ9UMZ3 2332 aa18.83■□□□□ 0.6
SF3A1-205ENST00000463818 CDRT15L2A8MXV6 281 aa18.82■□□□□ 0.6
SF3A1-205ENST00000463818 B4DGG1 531 aa18.82■□□□□ 0.6
SF3A1-205ENST00000463818 TMX2-CTNND1H3BSU7 103 aa18.82■□□□□ 0.6
SF3A1-205ENST00000463818 KLK10O43240 276 aa18.82■□□□□ 0.6
SF3A1-205ENST00000463818 CCNB1P14635 433 aa18.82■□□□□ 0.6
SF3A1-205ENST00000463818 TEAD1P28347 426 aa18.82■□□□□ 0.6
SF3A1-205ENST00000463818 POLD2P49005 469 aa18.82■□□□□ 0.6
SF3A1-205ENST00000463818 INHBCP55103 352 aa18.82■□□□□ 0.6
SF3A1-205ENST00000463818 CDK3Q00526 305 aa18.82■□□□□ 0.6
SF3A1-205ENST00000463818 SLC10A2Q12908 348 aaPredicted RBP18.82■□□□□ 0.6
SF3A1-205ENST00000463818 HLTFQ14527 1009 aaKnown RBP eCLIP18.82■□□□□ 0.6
SF3A1-205ENST00000463818 C14orf28Q4W4Y0 310 aa18.82■□□□□ 0.6
SF3A1-205ENST00000463818 SPECC1LQ69YQ0 1117 aa18.82■□□□□ 0.6
SF3A1-205ENST00000463818 CCNJLQ8IV13 435 aa18.82■□□□□ 0.6
SF3A1-205ENST00000463818 ARRDC2Q8TBH0 407 aa18.82■□□□□ 0.6
SF3A1-205ENST00000463818 RAPGEF5Q92565 580 aa18.82■□□□□ 0.6
SF3A1-205ENST00000463818 FATE1Q969F0 183 aa18.82■□□□□ 0.6
SF3A1-205ENST00000463818 FAF2Q96CS3 445 aa18.82■□□□□ 0.6
SF3A1-205ENST00000463818 LIN37Q96GY3 246 aaPredicted RBP18.82■□□□□ 0.6
SF3A1-205ENST00000463818 DNAJC7Q99615 494 aa18.82■□□□□ 0.6
SF3A1-205ENST00000463818 FOXP3Q9BZS1 431 aa18.82■□□□□ 0.6
SF3A1-205ENST00000463818 ABCG8Q9H221 673 aa18.82■□□□□ 0.6
SF3A1-205ENST00000463818 DEF6Q9H4E7 631 aa18.82■□□□□ 0.6
SF3A1-205ENST00000463818 EPB41L5Q9HCM4 733 aa18.82■□□□□ 0.6
SF3A1-205ENST00000463818 AMACRQ9UHK6 382 aa18.82■□□□□ 0.6
SF3A1-205ENST00000463818 CD84Q9UIB8 345 aa18.82■□□□□ 0.6
SF3A1-205ENST00000463818 LCMT1Q9UIC8 334 aa18.82■□□□□ 0.6
SF3A1-205ENST00000463818 CHKBQ9Y259 395 aa18.82■□□□□ 0.6
SF3A1-205ENST00000463818 RNF215Q9Y6U7 377 aa18.82■□□□□ 0.6
SF3A1-205ENST00000463818 A0A0J9YYE9 177 aa18.81■□□□□ 0.6
SF3A1-205ENST00000463818 SSU72P8A0A1W2PR75 194 aa18.81■□□□□ 0.6
SF3A1-205ENST00000463818 D6RAR5 112 aa18.81■□□□□ 0.6
SF3A1-205ENST00000463818 CBFA2T2O43439 604 aa18.81■□□□□ 0.6
SF3A1-205ENST00000463818 TRBC1P01850 177 aa18.81■□□□□ 0.6
SF3A1-205ENST00000463818 FGF1P05230 155 aa18.81■□□□□ 0.6
SF3A1-205ENST00000463818 TMEM253P0C7T8 217 aa18.81■□□□□ 0.6
SF3A1-205ENST00000463818 PNLIPP16233 465 aa18.81■□□□□ 0.6
SF3A1-205ENST00000463818 KDELR1P24390 212 aa18.81■□□□□ 0.6
SF3A1-205ENST00000463818 GPR1P46091 355 aa18.81■□□□□ 0.6
SF3A1-205ENST00000463818 GNPDA1P46926 289 aa18.81■□□□□ 0.6
SF3A1-205ENST00000463818 EPHB1P54762 984 aa18.81■□□□□ 0.6
SF3A1-205ENST00000463818 PTSQ03393 145 aa18.81■□□□□ 0.6
SF3A1-205ENST00000463818 GBE1Q04446 702 aa18.81■□□□□ 0.6
SF3A1-205ENST00000463818 DPTQ07507 201 aa18.81■□□□□ 0.6
SF3A1-205ENST00000463818 MESDQ14696 234 aa18.81■□□□□ 0.6
SF3A1-205ENST00000463818 ZFYVE27Q5T4F4 411 aa18.81■□□□□ 0.6
SF3A1-205ENST00000463818 LRRC66Q68CR7 880 aa18.81■□□□□ 0.6
SF3A1-205ENST00000463818 ALG1LQ6GMV1 187 aa18.81■□□□□ 0.6
SF3A1-205ENST00000463818 RAB11FIP2Q7L804 512 aa18.81■□□□□ 0.6
SF3A1-205ENST00000463818 FBXO39Q8N4B4 442 aa18.81■□□□□ 0.6
SF3A1-205ENST00000463818 CCNYQ8ND76 341 aa18.81■□□□□ 0.6
SF3A1-205ENST00000463818 PTCD2Q8WV60 388 aaKnown RBP18.81■□□□□ 0.6
SF3A1-205ENST00000463818 TMEM74Q96NL1 305 aa18.81■□□□□ 0.6
SF3A1-205ENST00000463818 GSDMCQ9BYG8 508 aa18.81■□□□□ 0.6
SF3A1-205ENST00000463818 STRADBQ9C0K7 418 aa18.81■□□□□ 0.6
SF3A1-205ENST00000463818 ZNHIT6Q9NWK9 470 aaKnown RBP18.81■□□□□ 0.6
SF3A1-205ENST00000463818 TRNAU1APQ9NX07 287 aaKnown RBP18.81■□□□□ 0.6
SF3A1-205ENST00000463818 ATXN7L1Q9ULK2 861 aaPredicted RBP18.81■□□□□ 0.6
SF3A1-205ENST00000463818 SUFUQ9UMX1 484 aa18.81■□□□□ 0.6
SF3A1-205ENST00000463818 TTLL3Q9Y4R7 772 aa18.81■□□□□ 0.6
SF3A1-205ENST00000463818 TEX51A0A1B0GUA7 166 aa18.8■□□□□ 0.6
SF3A1-205ENST00000463818 PLD2O14939 933 aa18.8■□□□□ 0.6
SF3A1-205ENST00000463818 AKR1B10O60218 316 aa18.8■□□□□ 0.6
SF3A1-205ENST00000463818 PRLP01236 227 aa18.8■□□□□ 0.6
SF3A1-205ENST00000463818 MX2P20592 715 aa18.8■□□□□ 0.6
SF3A1-205ENST00000463818 AK4P27144 223 aaPredicted RBP18.8■□□□□ 0.6
SF3A1-205ENST00000463818 MAN1A1P33908 653 aa18.8■□□□□ 0.6
SF3A1-205ENST00000463818 MLLT3P42568 568 aaPredicted RBP18.8■□□□□ 0.6
SF3A1-205ENST00000463818 SKOR1P84550 965 aa18.8■□□□□ 0.6
SF3A1-205ENST00000463818 NIPAL4Q0D2K0 466 aa18.8■□□□□ 0.6
SF3A1-205ENST00000463818 ILF3Q12906 894 aaKnown RBP eCLIP18.8■□□□□ 0.6
SF3A1-205ENST00000463818 TRIM14Q14142 442 aa18.8■□□□□ 0.6
SF3A1-205ENST00000463818 NLRP8Q86W28 1048 aa18.8■□□□□ 0.6
SF3A1-205ENST00000463818 SLC35G2Q8TBE7 412 aa18.8■□□□□ 0.6
SF3A1-205ENST00000463818 KIAA1524Q8TCG1 905 aa18.8■□□□□ 0.6
SF3A1-205ENST00000463818 ZDHHC1Q8WTX9 485 aa18.8■□□□□ 0.6
SF3A1-205ENST00000463818 SCAMP4Q969E2 229 aa18.8■□□□□ 0.6
SF3A1-205ENST00000463818 AP2M1Q96CW1 435 aa18.8■□□□□ 0.6
SF3A1-205ENST00000463818 CCDC97Q96F63 343 aaPredicted RBP18.8■□□□□ 0.6
SF3A1-205ENST00000463818 RNF157Q96PX1 679 aa18.8■□□□□ 0.6
SF3A1-205ENST00000463818 CHP1Q99653 195 aa18.8■□□□□ 0.6
SF3A1-205ENST00000463818 CPNE5Q9HCH3 593 aa18.8■□□□□ 0.6
SF3A1-205ENST00000463818 HAUS2Q9NVX0 235 aa18.8■□□□□ 0.6
SF3A1-205ENST00000463818 DTLQ9NZJ0 730 aa18.8■□□□□ 0.6
SF3A1-205ENST00000463818 TAAR2Q9P1P5 351 aa18.8■□□□□ 0.6
SF3A1-205ENST00000463818 SLC17A4Q9Y2C5 497 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms