RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 CD84Q9UIB8 345 aa15.3■□□□□ 0.04
CMSS1-202ENST00000463526 SPTA1P02549 2419 aa15.29■□□□□ 0.04
CMSS1-202ENST00000463526 ARHGEF17Q96PE2 2063 aaPredicted RBP15.29■□□□□ 0.04
CMSS1-202ENST00000463526 IGHV5-10-1A0A0J9YXX1 117 aa15.29■□□□□ 0.04
CMSS1-202ENST00000463526 HTRA2O43464 458 aaPredicted RBP15.29■□□□□ 0.04
CMSS1-202ENST00000463526 FTLP02792 175 aaPredicted RBP15.29■□□□□ 0.04
CMSS1-202ENST00000463526 FGF3P11487 239 aaPredicted RBP15.29■□□□□ 0.04
CMSS1-202ENST00000463526 CYP2A6P11509 494 aaPredicted RBP15.29■□□□□ 0.04
CMSS1-202ENST00000463526 ATP1A3P13637 1013 aa15.29■□□□□ 0.04
CMSS1-202ENST00000463526 ITGB6P18564 788 aa15.29■□□□□ 0.04
CMSS1-202ENST00000463526 CD1CP29017 333 aa15.29■□□□□ 0.04
CMSS1-202ENST00000463526 ADCY8P40145 1251 aa15.29■□□□□ 0.04
CMSS1-202ENST00000463526 CSRP3P50461 194 aa15.29■□□□□ 0.04
CMSS1-202ENST00000463526 TRAF2Q12933 501 aa15.29■□□□□ 0.04
CMSS1-202ENST00000463526 DPYSQ14117 519 aa15.29■□□□□ 0.04
CMSS1-202ENST00000463526 ASIC2Q16515 512 aa15.29■□□□□ 0.04
CMSS1-202ENST00000463526 SMTNL2Q2TAL5 461 aa15.29■□□□□ 0.04
CMSS1-202ENST00000463526 XKR5Q6UX68 686 aa15.29■□□□□ 0.04
CMSS1-202ENST00000463526 RFLNAQ6ZTI6 216 aa15.29■□□□□ 0.04
CMSS1-202ENST00000463526 APTXQ7Z2E3 356 aaKnown RBP15.29■□□□□ 0.04
CMSS1-202ENST00000463526 TSPAN33Q86UF1 283 aa15.29■□□□□ 0.04
CMSS1-202ENST00000463526 C17orf82Q86X59 251 aaPredicted RBP15.29■□□□□ 0.04
CMSS1-202ENST00000463526 HSPH1Q92598 858 aa15.29■□□□□ 0.04
CMSS1-202ENST00000463526 ZNF653Q96CK0 615 aa15.29■□□□□ 0.04
CMSS1-202ENST00000463526 DTD2Q96FN9 168 aa15.29■□□□□ 0.04
CMSS1-202ENST00000463526 ZNF599Q96NL3 588 aa15.29■□□□□ 0.04
CMSS1-202ENST00000463526 NUDCD1Q96RS6 583 aa15.29■□□□□ 0.04
CMSS1-202ENST00000463526 SYT11Q9BT88 431 aa15.29■□□□□ 0.04
CMSS1-202ENST00000463526 FRMD8Q9BZ67 464 aaPredicted RBP15.29■□□□□ 0.04
CMSS1-202ENST00000463526 ZMYND15Q9H091 742 aa15.29■□□□□ 0.04
CMSS1-202ENST00000463526 ZWILCHQ9H900 591 aa15.29■□□□□ 0.04
CMSS1-202ENST00000463526 TRNAU1APQ9NX07 287 aaKnown RBP15.29■□□□□ 0.04
CMSS1-202ENST00000463526 PHTF1Q9UMS5 762 aa15.29■□□□□ 0.04
CMSS1-202ENST00000463526 TMEM98Q9Y2Y6 226 aa15.29■□□□□ 0.04
CMSS1-202ENST00000463526 ST14Q9Y5Y6 855 aa15.29■□□□□ 0.04
CMSS1-202ENST00000463526 SCN8AQ9UQD0 1980 aa15.28■□□□□ 0.04
CMSS1-202ENST00000463526 NPIPB15A6NHN6 443 aaPredicted RBP15.28■□□□□ 0.04
CMSS1-202ENST00000463526 LRRC10BA6NIK2 292 aa15.28■□□□□ 0.04
CMSS1-202ENST00000463526 LRRC53A6NM62 1247 aa15.28■□□□□ 0.04
CMSS1-202ENST00000463526 H3BRJ5 948 aa15.28■□□□□ 0.04
CMSS1-202ENST00000463526 PPM1DO15297 605 aa15.28■□□□□ 0.04
CMSS1-202ENST00000463526 ZW10O43264 779 aa15.28■□□□□ 0.04
CMSS1-202ENST00000463526 LRCH4O75427 683 aa15.28■□□□□ 0.04
CMSS1-202ENST00000463526 LHCGRP22888 699 aa15.28■□□□□ 0.04
CMSS1-202ENST00000463526 CD82P27701 267 aa15.28■□□□□ 0.04
CMSS1-202ENST00000463526 ACTR1BP42025 376 aa15.28■□□□□ 0.04
CMSS1-202ENST00000463526 GPR1P46091 355 aa15.28■□□□□ 0.04
CMSS1-202ENST00000463526 HCAR3P49019 387 aa15.28■□□□□ 0.04
CMSS1-202ENST00000463526 ACTR1AP61163 376 aa15.28■□□□□ 0.04
CMSS1-202ENST00000463526 CLCA4Q14CN2 919 aa15.28■□□□□ 0.04
CMSS1-202ENST00000463526 STX1AQ16623 288 aa15.28■□□□□ 0.04
CMSS1-202ENST00000463526 PPP1R2P3Q6NXS1 205 aa15.28■□□□□ 0.04
CMSS1-202ENST00000463526 ATG14Q6ZNE5 492 aa15.28■□□□□ 0.04
CMSS1-202ENST00000463526 RBM43Q6ZSC3 357 aaKnown RBP15.28■□□□□ 0.04
CMSS1-202ENST00000463526 MARK2Q7KZI7 788 aaKnown RBP15.28■□□□□ 0.04
CMSS1-202ENST00000463526 ZNF438Q7Z4V0 828 aa15.28■□□□□ 0.04
CMSS1-202ENST00000463526 ZNF761Q86XN6 746 aaPredicted RBP15.28■□□□□ 0.04
CMSS1-202ENST00000463526 NAGSQ8N159 534 aa15.28■□□□□ 0.04
CMSS1-202ENST00000463526 LZTR1Q8N653 840 aa15.28■□□□□ 0.04
CMSS1-202ENST00000463526 FNIP1Q8TF40 1166 aa15.28■□□□□ 0.04
CMSS1-202ENST00000463526 SMIM14Q96QK8 99 aa15.28■□□□□ 0.04
CMSS1-202ENST00000463526 TAAR9Q96RI9 348 aa15.28■□□□□ 0.04
CMSS1-202ENST00000463526 HAUS4Q9H6D7 363 aa15.28■□□□□ 0.04
CMSS1-202ENST00000463526 HECTD1Q9ULT8 2610 aa15.27■□□□□ 0.04
CMSS1-202ENST00000463526 A0A1W2PQ67 120 aa15.27■□□□□ 0.04
CMSS1-202ENST00000463526 STMND1H3BQB6 276 aa15.27■□□□□ 0.04
CMSS1-202ENST00000463526 SOCS5O75159 536 aa15.27■□□□□ 0.04
CMSS1-202ENST00000463526 PEX11BO96011 259 aa15.27■□□□□ 0.04
CMSS1-202ENST00000463526 TCF4P15884 667 aa15.27■□□□□ 0.04
CMSS1-202ENST00000463526 CR2P20023 1033 aa15.27■□□□□ 0.04
CMSS1-202ENST00000463526 NFKBIAP25963 317 aa15.27■□□□□ 0.04
CMSS1-202ENST00000463526 IL1R2P27930 398 aa15.27■□□□□ 0.04
CMSS1-202ENST00000463526 CSTF2P33240 577 aaKnown RBP eCLIP15.27■□□□□ 0.04
CMSS1-202ENST00000463526 HSPA9P38646 679 aaKnown RBP15.27■□□□□ 0.04
CMSS1-202ENST00000463526 ARL4AP40617 200 aa15.27■□□□□ 0.04
CMSS1-202ENST00000463526 ATP1A2P50993 1020 aa15.27■□□□□ 0.04
CMSS1-202ENST00000463526 LIMK2P53671 638 aa15.27■□□□□ 0.04
CMSS1-202ENST00000463526 NCAPHQ15003 741 aa15.27■□□□□ 0.04
CMSS1-202ENST00000463526 TMCO3Q6UWJ1 677 aa15.27■□□□□ 0.04
CMSS1-202ENST00000463526 ZNF571Q7Z3V5 609 aaPredicted RBP15.27■□□□□ 0.04
CMSS1-202ENST00000463526 TRIM74Q86UV6 250 aa15.27■□□□□ 0.04
CMSS1-202ENST00000463526 PSTKQ8IV42 348 aaKnown RBP15.27■□□□□ 0.04
CMSS1-202ENST00000463526 BBS5Q8N3I7 341 aa15.27■□□□□ 0.04
CMSS1-202ENST00000463526 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.27■□□□□ 0.04
CMSS1-202ENST00000463526 AOPEPQ8N6M6 819 aa15.27■□□□□ 0.04
CMSS1-202ENST00000463526 IL22RA1Q8N6P7 574 aa15.27■□□□□ 0.04
CMSS1-202ENST00000463526 NSMCE1Q8WV22 266 aa15.27■□□□□ 0.04
CMSS1-202ENST00000463526 ART4Q93070 314 aa15.27■□□□□ 0.04
CMSS1-202ENST00000463526 HSD3B7Q9H2F3 369 aa15.27■□□□□ 0.04
CMSS1-202ENST00000463526 KCTD5Q9NXV2 234 aa15.27■□□□□ 0.04
CMSS1-202ENST00000463526 SLC39A1Q9NY26 324 aa15.27■□□□□ 0.04
CMSS1-202ENST00000463526 KCNK4Q9NYG8 393 aa15.27■□□□□ 0.04
CMSS1-202ENST00000463526 TMEM9Q9P0T7 183 aa15.27■□□□□ 0.04
CMSS1-202ENST00000463526 B3GALT1Q9Y5Z6 326 aa15.27■□□□□ 0.04
CMSS1-202ENST00000463526 TERTO14746 1132 aaKnown RBP15.26■□□□□ 0.03
CMSS1-202ENST00000463526 HGSO14964 777 aaPredicted RBP15.26■□□□□ 0.03
CMSS1-202ENST00000463526 SUV39H1O43463 412 aa15.26■□□□□ 0.03
CMSS1-202ENST00000463526 PGLSO95336 258 aa15.26■□□□□ 0.03
CMSS1-202ENST00000463526 SFTPCP11686 197 aa15.26■□□□□ 0.03
CMSS1-202ENST00000463526 SKILP12757 684 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms