RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 SRP54P61011 504 aaKnown RBP15.38■□□□□ 0.05
VARS-219ENST00000461328 COPS2P61201 443 aa15.38■□□□□ 0.05
VARS-219ENST00000461328 RPL26P61254 145 aaKnown RBP15.38■□□□□ 0.05
VARS-219ENST00000461328 SKOR1P84550 965 aa15.38■□□□□ 0.05
VARS-219ENST00000461328 PRKD1Q15139 912 aaPredicted RBP15.38■□□□□ 0.05
VARS-219ENST00000461328 PCSK7Q16549 785 aa15.38■□□□□ 0.05
VARS-219ENST00000461328 C6orf132Q5T0Z8 1188 aa15.38■□□□□ 0.05
VARS-219ENST00000461328 FAM182AQ5T1J6 154 aa15.38■□□□□ 0.05
VARS-219ENST00000461328 RAET1GQ6H3X3 334 aa15.38■□□□□ 0.05
VARS-219ENST00000461328 GUSBP11Q6P575 273 aa15.38■□□□□ 0.05
VARS-219ENST00000461328 EFL1Q7Z2Z2 1120 aaKnown RBP15.38■□□□□ 0.05
VARS-219ENST00000461328 PEX26Q7Z412 305 aa15.38■□□□□ 0.05
VARS-219ENST00000461328 HSD11B1LQ7Z5J1 315 aa15.38■□□□□ 0.05
VARS-219ENST00000461328 NT5DC3Q86UY8 548 aa15.38■□□□□ 0.05
VARS-219ENST00000461328 FSTL5Q8N475 847 aaPredicted RBP15.38■□□□□ 0.05
VARS-219ENST00000461328 CNTD1Q8N815 330 aa15.38■□□□□ 0.05
VARS-219ENST00000461328 MAPK15Q8TD08 544 aa15.38■□□□□ 0.05
VARS-219ENST00000461328 DTD2Q96FN9 168 aa15.38■□□□□ 0.05
VARS-219ENST00000461328 RBM15Q96T37 977 aaKnown RBP eCLIP15.38■□□□□ 0.05
VARS-219ENST00000461328 ADGRE3Q9BY15 652 aa15.38■□□□□ 0.05
VARS-219ENST00000461328 CLPBQ9H078 707 aa15.38■□□□□ 0.05
VARS-219ENST00000461328 KLHL8Q9P2G9 620 aaPredicted RBP15.38■□□□□ 0.05
VARS-219ENST00000461328 MOSPD1Q9UJG1 213 aa15.38■□□□□ 0.05
VARS-219ENST00000461328 RPL26L1Q9UNX3 145 aaKnown RBP15.38■□□□□ 0.05
VARS-219ENST00000461328 RAXQ9Y2V3 346 aa15.38■□□□□ 0.05
VARS-219ENST00000461328 PCDHA3Q9Y5H8 950 aa15.38■□□□□ 0.05
VARS-219ENST00000461328 AK5Q9Y6K8 562 aa15.38■□□□□ 0.05
VARS-219ENST00000461328 FREM2Q5SZK8 3169 aa15.38■□□□□ 0.05
VARS-219ENST00000461328 A0A0U1RQS6 177 aa15.37■□□□□ 0.05
VARS-219ENST00000461328 H7C0C1 242 aa15.37■□□□□ 0.05
VARS-219ENST00000461328 YY2O15391 372 aa15.37■□□□□ 0.05
VARS-219ENST00000461328 MT-CO3P00414 261 aa15.37■□□□□ 0.05
VARS-219ENST00000461328 TNFP01375 233 aa15.37■□□□□ 0.05
VARS-219ENST00000461328 CELA2BP08218 269 aaPredicted RBP15.37■□□□□ 0.05
VARS-219ENST00000461328 ZNF30P17039 623 aa15.37■□□□□ 0.05
VARS-219ENST00000461328 GM2AP17900 193 aa15.37■□□□□ 0.05
VARS-219ENST00000461328 KELP23276 732 aa15.37■□□□□ 0.05
VARS-219ENST00000461328 PTPN3P26045 913 aa15.37■□□□□ 0.05
VARS-219ENST00000461328 TNNT3P45378 269 aaPredicted RBP15.37■□□□□ 0.05
VARS-219ENST00000461328 ATP5OP48047 213 aa15.37■□□□□ 0.05
VARS-219ENST00000461328 KIAA1024LP59773 190 aa15.37■□□□□ 0.05
VARS-219ENST00000461328 ADCY2Q08462 1091 aa15.37■□□□□ 0.05
VARS-219ENST00000461328 GALNT3Q14435 633 aa15.37■□□□□ 0.05
VARS-219ENST00000461328 TEX44Q53QW1 395 aa15.37■□□□□ 0.05
VARS-219ENST00000461328 ESRP1Q6NXG1 681 aaKnown RBP15.37■□□□□ 0.05
VARS-219ENST00000461328 PNCKQ6P2M8 343 aa15.37■□□□□ 0.05
VARS-219ENST00000461328 CRTC1Q6UUV9 634 aa15.37■□□□□ 0.05
VARS-219ENST00000461328 Q6ZVL8 140 aa15.37■□□□□ 0.05
VARS-219ENST00000461328 BBS12Q6ZW61 710 aa15.37■□□□□ 0.05
VARS-219ENST00000461328 KDELC2Q7Z4H8 507 aa15.37■□□□□ 0.05
VARS-219ENST00000461328 CACTIN-AS1Q8N1I8 211 aa15.37■□□□□ 0.05
VARS-219ENST00000461328 UBL4BQ8N7F7 174 aa15.37■□□□□ 0.05
VARS-219ENST00000461328 DCBLD1Q8N8Z6 715 aa15.37■□□□□ 0.05
VARS-219ENST00000461328 LRRC57Q8N9N7 239 aa15.37■□□□□ 0.05
VARS-219ENST00000461328 SCG3Q8WXD2 468 aaKnown RBP15.37■□□□□ 0.05
VARS-219ENST00000461328 FUBP1Q96AE4 644 aaKnown RBP15.37■□□□□ 0.05
VARS-219ENST00000461328 QKIQ96PU8 341 aaKnown RBP eCLIP15.37■□□□□ 0.05
VARS-219ENST00000461328 SMIM14Q96QK8 99 aa15.37■□□□□ 0.05
VARS-219ENST00000461328 FERMT1Q9BQL6 677 aa15.37■□□□□ 0.05
VARS-219ENST00000461328 BOCQ9BWV1 1114 aa15.37■□□□□ 0.05
VARS-219ENST00000461328 TSGA10Q9BZW7 698 aa15.37■□□□□ 0.05
VARS-219ENST00000461328 SLC25A51Q9H1U9 297 aa15.37■□□□□ 0.05
VARS-219ENST00000461328 SUDS3Q9H7L9 328 aaPredicted RBP15.37■□□□□ 0.05
VARS-219ENST00000461328 PHPT1Q9NRX4 125 aaPredicted RBP15.37■□□□□ 0.05
VARS-219ENST00000461328 CD84Q9UIB8 345 aa15.37■□□□□ 0.05
VARS-219ENST00000461328 PPIL1Q9Y3C6 166 aa15.37■□□□□ 0.05
VARS-219ENST00000461328 ZZEF1O43149 2961 aa15.37■□□□□ 0.05
VARS-219ENST00000461328 ASPMQ8IZT6 3477 aa15.37■□□□□ 0.05
VARS-219ENST00000461328 DMXL2Q8TDJ6 3036 aa15.36■□□□□ 0.05
VARS-219ENST00000461328 A0A0U1RQJ8 604 aa15.36■□□□□ 0.05
VARS-219ENST00000461328 C1orf232A0A0U1RR37 186 aa15.36■□□□□ 0.05
VARS-219ENST00000461328 APOC4-APOC2K7ER74 178 aa15.36■□□□□ 0.05
VARS-219ENST00000461328 PDE2AO00408 941 aaPredicted RBP15.36■□□□□ 0.05
VARS-219ENST00000461328 FTCDO95954 541 aa15.36■□□□□ 0.05
VARS-219ENST00000461328 APOC2P02655 101 aa15.36■□□□□ 0.05
VARS-219ENST00000461328 SLC4A1P02730 911 aa15.36■□□□□ 0.05
VARS-219ENST00000461328 MMP2P08253 660 aa15.36■□□□□ 0.05
VARS-219ENST00000461328 IHHQ14623 411 aa15.36■□□□□ 0.05
VARS-219ENST00000461328 CCDC70Q6NSX1 233 aa15.36■□□□□ 0.05
VARS-219ENST00000461328 NYAP1Q6ZVC0 841 aa15.36■□□□□ 0.05
VARS-219ENST00000461328 HEATR4Q86WZ0 1026 aa15.36■□□□□ 0.05
VARS-219ENST00000461328 GKN2Q86XP6 184 aa15.36■□□□□ 0.05
VARS-219ENST00000461328 SLC35F3Q8IY50 421 aa15.36■□□□□ 0.05
VARS-219ENST00000461328 CCDC112Q8NEF3 446 aa15.36■□□□□ 0.05
VARS-219ENST00000461328 OR56A4Q8NGH8 313 aa15.36■□□□□ 0.05
VARS-219ENST00000461328 IMP4Q96G21 291 aaKnown RBP15.36■□□□□ 0.05
VARS-219ENST00000461328 PDXPQ96GD0 296 aa15.36■□□□□ 0.05
VARS-219ENST00000461328 DEPDC7Q96QD5 511 aa15.36■□□□□ 0.05
VARS-219ENST00000461328 MLPHQ9BV36 600 aaPredicted RBP15.36■□□□□ 0.05
VARS-219ENST00000461328 OSBPL8Q9BZF1 889 aa15.36■□□□□ 0.05
VARS-219ENST00000461328 NRSN2Q9GZP1 204 aa15.36■□□□□ 0.05
VARS-219ENST00000461328 GLOD4Q9HC38 313 aa15.36■□□□□ 0.05
VARS-219ENST00000461328 SIRPGQ9P1W8 387 aa15.36■□□□□ 0.05
VARS-219ENST00000461328 PACSIN2Q9UNF0 486 aaPredicted RBP15.36■□□□□ 0.05
VARS-219ENST00000461328 EME2A4GXA9 379 aaPredicted RBP15.35■□□□□ 0.05
VARS-219ENST00000461328 TMEM202A6NGA9 273 aa15.35■□□□□ 0.05
VARS-219ENST00000461328 HACD1B0YJ81 288 aa15.35■□□□□ 0.05
VARS-219ENST00000461328 F5H423 210 aaPredicted RBP15.35■□□□□ 0.05
VARS-219ENST00000461328 ARHGAP6O43182 974 aa15.35■□□□□ 0.05
VARS-219ENST00000461328 NRDCO43847 1150 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms