RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 PLXNB3Q9ULL4 1909 aa13.26□□□□□ -0.29
RAB11FIP3-207ENST00000461009 USP24Q9UPU5 2620 aa13.26□□□□□ -0.29
RAB11FIP3-207ENST00000461009 FRYQ5TBA9 3013 aa13.25□□□□□ -0.29
RAB11FIP3-207ENST00000461009 AQP9O43315 295 aa13.25□□□□□ -0.29
RAB11FIP3-207ENST00000461009 ANXA9O76027 345 aa13.25□□□□□ -0.29
RAB11FIP3-207ENST00000461009 GP1BAP07359 652 aa13.25□□□□□ -0.29
RAB11FIP3-207ENST00000461009 MMP2P08253 660 aa13.25□□□□□ -0.29
RAB11FIP3-207ENST00000461009 PDHA1P08559 390 aa13.25□□□□□ -0.29
RAB11FIP3-207ENST00000461009 C6P13671 934 aa13.25□□□□□ -0.29
RAB11FIP3-207ENST00000461009 STIP1P31948 543 aaKnown RBP13.25□□□□□ -0.29
RAB11FIP3-207ENST00000461009 RPIAP49247 311 aa13.25□□□□□ -0.29
RAB11FIP3-207ENST00000461009 PFN3P60673 137 aa13.25□□□□□ -0.29
RAB11FIP3-207ENST00000461009 CDK18Q07002 472 aa13.25□□□□□ -0.29
RAB11FIP3-207ENST00000461009 CAMK2BQ13554 666 aa13.25□□□□□ -0.29
RAB11FIP3-207ENST00000461009 PRPSAP1Q14558 356 aa13.25□□□□□ -0.29
RAB11FIP3-207ENST00000461009 LRRC14Q15048 493 aa13.25□□□□□ -0.29
RAB11FIP3-207ENST00000461009 ACOX1Q15067 660 aa13.25□□□□□ -0.29
RAB11FIP3-207ENST00000461009 AGERQ15109 404 aa13.25□□□□□ -0.29
RAB11FIP3-207ENST00000461009 FAXCQ5TGI0 409 aa13.25□□□□□ -0.29
RAB11FIP3-207ENST00000461009 ZCCHC8Q6NZY4 707 aaKnown RBP13.25□□□□□ -0.29
RAB11FIP3-207ENST00000461009 MARCH9Q86YJ5 346 aa13.25□□□□□ -0.29
RAB11FIP3-207ENST00000461009 ZNF548Q8NEK5 533 aaPredicted RBP13.25□□□□□ -0.29
RAB11FIP3-207ENST00000461009 LPCAT1Q8NF37 534 aa13.25□□□□□ -0.29
RAB11FIP3-207ENST00000461009 LMX1AQ8TE12 382 aa13.25□□□□□ -0.29
RAB11FIP3-207ENST00000461009 SCG3Q8WXD2 468 aaKnown RBP13.25□□□□□ -0.29
RAB11FIP3-207ENST00000461009 LRRC45Q96CN5 670 aa13.25□□□□□ -0.29
RAB11FIP3-207ENST00000461009 PBKQ96KB5 322 aa13.25□□□□□ -0.29
RAB11FIP3-207ENST00000461009 APOLD1Q96LR9 279 aa13.25□□□□□ -0.29
RAB11FIP3-207ENST00000461009 MLPHQ9BV36 600 aaPredicted RBP13.25□□□□□ -0.29
RAB11FIP3-207ENST00000461009 NRSN2Q9GZP1 204 aa13.25□□□□□ -0.29
RAB11FIP3-207ENST00000461009 GPR27Q9NS67 375 aa13.25□□□□□ -0.29
RAB11FIP3-207ENST00000461009 B4GALT6Q9UBX8 382 aa13.25□□□□□ -0.29
RAB11FIP3-207ENST00000461009 RSPH14Q9UHP6 348 aa13.25□□□□□ -0.29
RAB11FIP3-207ENST00000461009 LHX6Q9UPM6 363 aa13.25□□□□□ -0.29
RAB11FIP3-207ENST00000461009 DOLKQ9UPQ8 538 aa13.25□□□□□ -0.29
RAB11FIP3-207ENST00000461009 A0A0J9YYE9 177 aa13.24□□□□□ -0.29
RAB11FIP3-207ENST00000461009 A8MX80 341 aa13.24□□□□□ -0.29
RAB11FIP3-207ENST00000461009 ANKRD66B4E2M5 251 aa13.24□□□□□ -0.29
RAB11FIP3-207ENST00000461009 K7ESM1 405 aa13.24□□□□□ -0.29
RAB11FIP3-207ENST00000461009 PSMD11O00231 422 aa13.24□□□□□ -0.29
RAB11FIP3-207ENST00000461009 TPP1O14773 563 aa13.24□□□□□ -0.29
RAB11FIP3-207ENST00000461009 CEP104O60308 925 aa13.24□□□□□ -0.29
RAB11FIP3-207ENST00000461009 PMPCBO75439 489 aa13.24□□□□□ -0.29
RAB11FIP3-207ENST00000461009 HEXIM1O94992 359 aaKnown RBP13.24□□□□□ -0.29
RAB11FIP3-207ENST00000461009 EPOP01588 193 aa13.24□□□□□ -0.29
RAB11FIP3-207ENST00000461009 TRBC1P01850 177 aa13.24□□□□□ -0.29
RAB11FIP3-207ENST00000461009 ZNF30P17039 623 aa13.24□□□□□ -0.29
RAB11FIP3-207ENST00000461009 CTPS1P17812 591 aa13.24□□□□□ -0.29
RAB11FIP3-207ENST00000461009 NFKB1P19838 968 aa13.24□□□□□ -0.29
RAB11FIP3-207ENST00000461009 SEMG2Q02383 582 aa13.24□□□□□ -0.29
RAB11FIP3-207ENST00000461009 PPARDQ03181 441 aa13.24□□□□□ -0.29
RAB11FIP3-207ENST00000461009 MPP3Q13368 585 aa13.24□□□□□ -0.29
RAB11FIP3-207ENST00000461009 ANKRD20A2Q5SQ80 823 aa13.24□□□□□ -0.29
RAB11FIP3-207ENST00000461009 ANKRD20A1Q5TYW2 823 aa13.24□□□□□ -0.29
RAB11FIP3-207ENST00000461009 ANKRD20A3Q5VUR7 823 aa13.24□□□□□ -0.29
RAB11FIP3-207ENST00000461009 TBATAQ96M53 351 aa13.24□□□□□ -0.29
RAB11FIP3-207ENST00000461009 MCCC1Q96RQ3 725 aaPredicted RBP13.24□□□□□ -0.29
RAB11FIP3-207ENST00000461009 FAM118BQ9BPY3 351 aa13.24□□□□□ -0.29
RAB11FIP3-207ENST00000461009 C10orf88Q9H8K7 445 aa13.24□□□□□ -0.29
RAB11FIP3-207ENST00000461009 HOMER3Q9NSC5 361 aa13.24□□□□□ -0.29
RAB11FIP3-207ENST00000461009 APOBEC3BQ9UH17 382 aaKnown RBP13.24□□□□□ -0.29
RAB11FIP3-207ENST00000461009 ZKSCAN5Q9Y2L8 839 aa13.24□□□□□ -0.29
RAB11FIP3-207ENST00000461009 RAXQ9Y2V3 346 aa13.24□□□□□ -0.29
RAB11FIP3-207ENST00000461009 COQ6Q9Y2Z9 468 aa13.24□□□□□ -0.29
RAB11FIP3-207ENST00000461009 AAR2Q9Y312 384 aaKnown RBP13.24□□□□□ -0.29
RAB11FIP3-207ENST00000461009 TCRBV7S2A1N4TA0A589 114 aa13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 GOLGA6CA6NDK9 693 aa13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 GOLGA6BA6NDN3 693 aa13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 C5orf60A6NFR6 353 aa13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 RRP8O43159 456 aaKnown RBP13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 RECQL5O94762 991 aaPredicted RBP13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 NDST3O95803 873 aa13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 MT-CYBP00156 380 aaPredicted RBP13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 MT-CO3P00414 261 aa13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 PRLP01236 227 aa13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 ANXA6P08133 673 aa13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 GOLGA6DP0CG33 693 aa13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 CTSEP14091 401 aa13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 CD68P34810 354 aaPredicted RBP13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 ACTN2P35609 894 aa13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 GEMP55040 296 aa13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 WNT3AP56704 352 aa13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 INSM1Q01101 510 aaPredicted RBP13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 RALGDSQ12967 914 aa13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 IHHQ14623 411 aa13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 NR0B2Q15466 257 aa13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 PCSK7Q16549 785 aa13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 QPCTQ16769 361 aa13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 LONRF2Q1L5Z9 754 aa13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 PRRT3Q5FWE3 981 aa13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 DENND2CQ68D51 928 aa13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 ESRP1Q6NXG1 681 aaKnown RBP13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 MACC1Q6ZN28 852 aa13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 LRRC69Q6ZNQ3 347 aa13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 KDELC2Q7Z4H8 507 aa13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 RAVER1Q8IY67 606 aaKnown RBP13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 SLC35F6Q8N357 371 aa13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 TP53I13Q8NBR0 393 aaPredicted RBP13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 SPATA22Q8NHS9 363 aa13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 SLC35B2Q8TB61 432 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms