RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 STX16-NPEPL1H3BU86 382 aa15.42■□□□□ 0.06
LMNB1-203ENST00000460265 SRP72O76094 671 aaKnown RBP15.42■□□□□ 0.06
LMNB1-203ENST00000460265 SLC35E2BP0CK96 405 aa15.42■□□□□ 0.06
LMNB1-203ENST00000460265 PIK3R1P27986 724 aa15.42■□□□□ 0.06
LMNB1-203ENST00000460265 ATP5C1P36542 298 aaKnown RBP15.42■□□□□ 0.06
LMNB1-203ENST00000460265 DMPKQ09013 629 aa15.42■□□□□ 0.06
LMNB1-203ENST00000460265 MRNIPQ6NTE8 343 aa15.42■□□□□ 0.06
LMNB1-203ENST00000460265 FUT10Q6P4F1 479 aa15.42■□□□□ 0.06
LMNB1-203ENST00000460265 RNF19BQ6ZMZ0 732 aa15.42■□□□□ 0.06
LMNB1-203ENST00000460265 THAP11Q96EK4 314 aa15.42■□□□□ 0.06
LMNB1-203ENST00000460265 GPR22Q99680 433 aa15.42■□□□□ 0.06
LMNB1-203ENST00000460265 KIFC1Q9BW19 673 aa15.42■□□□□ 0.06
LMNB1-203ENST00000460265 CCDC106Q9BWC9 280 aa15.42■□□□□ 0.06
LMNB1-203ENST00000460265 PRKD2Q9BZL6 878 aa15.42■□□□□ 0.06
LMNB1-203ENST00000460265 RHOCP08134 193 aa15.42■□□□□ 0.06
LMNB1-203ENST00000460265 TYMPP19971 482 aa15.42■□□□□ 0.06
LMNB1-203ENST00000460265 NUP107P57740 925 aa15.42■□□□□ 0.06
LMNB1-203ENST00000460265 CDK18Q07002 472 aa15.42■□□□□ 0.06
LMNB1-203ENST00000460265 PLD1Q13393 1074 aa15.42■□□□□ 0.06
LMNB1-203ENST00000460265 GK3PQ14409 553 aa15.42■□□□□ 0.06
LMNB1-203ENST00000460265 CYS1Q717R9 158 aa15.42■□□□□ 0.06
LMNB1-203ENST00000460265 SLC7A5P1Q8MH63 180 aa15.42■□□□□ 0.06
LMNB1-203ENST00000460265 SCAIQ8N9R8 606 aa15.42■□□□□ 0.06
LMNB1-203ENST00000460265 TM6SF2Q9BZW4 377 aa15.42■□□□□ 0.06
LMNB1-203ENST00000460265 RBM38Q9H0Z9 239 aaKnown RBP15.42■□□□□ 0.06
LMNB1-203ENST00000460265 TLL2Q9Y6L7 1015 aa15.42■□□□□ 0.06
LMNB1-203ENST00000460265 ZBTB14O43829 449 aa15.42■□□□□ 0.06
LMNB1-203ENST00000460265 DNAJA2O60884 412 aa15.42■□□□□ 0.06
LMNB1-203ENST00000460265 RHOQP17081 205 aa15.42■□□□□ 0.06
LMNB1-203ENST00000460265 HECTD2Q5U5R9 776 aa15.42■□□□□ 0.06
LMNB1-203ENST00000460265 FAM219BQ5XKK7 198 aa15.42■□□□□ 0.06
LMNB1-203ENST00000460265 LRRC8DQ7L1W4 858 aa15.42■□□□□ 0.06
LMNB1-203ENST00000460265 MARVELD2Q8N4S9 558 aa15.42■□□□□ 0.06
LMNB1-203ENST00000460265 PGAP3Q96FM1 320 aaPredicted RBP15.42■□□□□ 0.06
LMNB1-203ENST00000460265 HAUS8Q9BT25 410 aa15.42■□□□□ 0.06
LMNB1-203ENST00000460265 TLR6Q9Y2C9 796 aa15.42■□□□□ 0.06
LMNB1-203ENST00000460265 G3V2L1 256 aa15.41■□□□□ 0.06
LMNB1-203ENST00000460265 M0QZQ0 153 aa15.41■□□□□ 0.06
LMNB1-203ENST00000460265 AP1G1O43747 822 aa15.41■□□□□ 0.06
LMNB1-203ENST00000460265 HADHAP40939 763 aa15.41■□□□□ 0.06
LMNB1-203ENST00000460265 ARSDP51689 593 aa15.41■□□□□ 0.06
LMNB1-203ENST00000460265 ADRM1Q16186 407 aa15.41■□□□□ 0.06
LMNB1-203ENST00000460265 KLHDC9Q8NEP7 349 aa15.41■□□□□ 0.06
LMNB1-203ENST00000460265 SMIM14Q96QK8 99 aa15.41■□□□□ 0.06
LMNB1-203ENST00000460265 GPATCH1Q9BRR8 931 aaKnown RBP15.41■□□□□ 0.06
LMNB1-203ENST00000460265 CRTAMO95727 393 aa15.41■□□□□ 0.06
LMNB1-203ENST00000460265 LTA4HP09960 611 aaKnown RBP15.41■□□□□ 0.06
LMNB1-203ENST00000460265 PIM1P11309 404 aaPredicted RBP15.41■□□□□ 0.06
LMNB1-203ENST00000460265 ARSAP15289 507 aa15.41■□□□□ 0.06
LMNB1-203ENST00000460265 NAT1P18440 290 aa15.41■□□□□ 0.06
LMNB1-203ENST00000460265 RARS2Q5T160 578 aaKnown RBP15.41■□□□□ 0.06
LMNB1-203ENST00000460265 KCTD11Q693B1 232 aa15.41■□□□□ 0.06
LMNB1-203ENST00000460265 CYP2R1Q6VVX0 501 aa15.41■□□□□ 0.06
LMNB1-203ENST00000460265 ZYG11AQ6WRX3 759 aa15.41■□□□□ 0.06
LMNB1-203ENST00000460265 SEPT8Q92599 483 aa15.41■□□□□ 0.06
LMNB1-203ENST00000460265 JADE3Q92613 823 aa15.41■□□□□ 0.06
LMNB1-203ENST00000460265 EFCAB1Q9HAE3 211 aa15.41■□□□□ 0.06
LMNB1-203ENST00000460265 EML4Q9HC35 981 aaKnown RBP15.41■□□□□ 0.06
LMNB1-203ENST00000460265 ANKRD6Q9Y2G4 727 aa15.41■□□□□ 0.06
LMNB1-203ENST00000460265 FAM32AQ9Y421 112 aaKnown RBP15.41■□□□□ 0.06
LMNB1-203ENST00000460265 CEPT1Q9Y6K0 416 aa15.41■□□□□ 0.06
LMNB1-203ENST00000460265 PEX1O43933 1283 aa15.41■□□□□ 0.06
LMNB1-203ENST00000460265 RPLP2P05387 115 aaKnown RBP15.41■□□□□ 0.06
LMNB1-203ENST00000460265 PRSS56P0CW18 603 aa15.41■□□□□ 0.06
LMNB1-203ENST00000460265 ATP5F1P24539 256 aaPredicted RBP15.41■□□□□ 0.06
LMNB1-203ENST00000460265 TGFBIQ15582 683 aa15.41■□□□□ 0.06
LMNB1-203ENST00000460265 INAQ16352 499 aa15.41■□□□□ 0.06
LMNB1-203ENST00000460265 C6orf52Q5T4I8 152 aa15.41■□□□□ 0.06
LMNB1-203ENST00000460265 TSTD2Q5T7W7 516 aa15.41■□□□□ 0.06
LMNB1-203ENST00000460265 GK5Q6ZS86 529 aa15.41■□□□□ 0.06
LMNB1-203ENST00000460265 TUBGCP3Q96CW5 907 aa15.41■□□□□ 0.06
LMNB1-203ENST00000460265 PRDM5Q9NQX1 630 aaPredicted RBP15.41■□□□□ 0.06
LMNB1-203ENST00000460265 CDH22Q9UJ99 828 aa15.41■□□□□ 0.06
LMNB1-203ENST00000460265 UBDO15205 165 aa15.4■□□□□ 0.06
LMNB1-203ENST00000460265 STX7O15400 261 aaKnown RBP15.4■□□□□ 0.06
LMNB1-203ENST00000460265 TPST1O60507 370 aa15.4■□□□□ 0.06
LMNB1-203ENST00000460265 ADAM23O75077 832 aa15.4■□□□□ 0.06
LMNB1-203ENST00000460265 SIX3O95343 332 aaPredicted RBP15.4■□□□□ 0.06
LMNB1-203ENST00000460265 ALDH1A1P00352 501 aa15.4■□□□□ 0.06
LMNB1-203ENST00000460265 JUNP05412 331 aaKnown RBP15.4■□□□□ 0.06
LMNB1-203ENST00000460265 CDH3P22223 829 aa15.4■□□□□ 0.06
LMNB1-203ENST00000460265 PPARGP37231 505 aaPredicted RBP15.4■□□□□ 0.06
LMNB1-203ENST00000460265 SIRPB2Q5JXA9 342 aa15.4■□□□□ 0.06
LMNB1-203ENST00000460265 BNC2Q6ZN30 1099 aaPredicted RBP15.4■□□□□ 0.06
LMNB1-203ENST00000460265 TMCO2Q7Z6W1 182 aaPredicted RBP15.4■□□□□ 0.06
LMNB1-203ENST00000460265 TMIGD2Q96BF3 282 aa15.4■□□□□ 0.06
LMNB1-203ENST00000460265 MRPL57Q9BQC6 102 aaKnown RBP15.4■□□□□ 0.06
LMNB1-203ENST00000460265 CAAP1Q9H8G2 361 aa15.4■□□□□ 0.06
LMNB1-203ENST00000460265 MID1IP1Q9NPA3 183 aa15.4■□□□□ 0.06
LMNB1-203ENST00000460265 SEMA4BQ9NPR2 832 aaPredicted RBP15.4■□□□□ 0.06
LMNB1-203ENST00000460265 VPS28Q9UK41 221 aa15.4■□□□□ 0.06
LMNB1-203ENST00000460265 ZFP37Q9Y6Q3 630 aaPredicted RBP15.4■□□□□ 0.06
LMNB1-203ENST00000460265 EOMESO95936 686 aa15.4■□□□□ 0.06
LMNB1-203ENST00000460265 MBL2P11226 248 aaPredicted RBP15.4■□□□□ 0.06
LMNB1-203ENST00000460265 SLC11A1P49279 550 aa15.4■□□□□ 0.06
LMNB1-203ENST00000460265 ACADVLP49748 655 aa15.4■□□□□ 0.06
LMNB1-203ENST00000460265 BCAP31P51572 246 aa15.4■□□□□ 0.06
LMNB1-203ENST00000460265 SEMG2Q02383 582 aa15.4■□□□□ 0.06
LMNB1-203ENST00000460265 CCNIQ14094 377 aa15.4■□□□□ 0.06
LMNB1-203ENST00000460265 RTP2Q5QGT7 225 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms