RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 GMNCA6NCL1 334 aa24.4■■□□□ 1.5
U2AF1-204ENST00000459639 GRXCR2A6NFK2 248 aa24.4■■□□□ 1.5
U2AF1-204ENST00000459639 SOX1O00570 391 aaPredicted RBP24.4■■□□□ 1.5
U2AF1-204ENST00000459639 POU4F1Q01851 419 aa24.4■■□□□ 1.5
U2AF1-204ENST00000459639 SEMA3AQ14563 771 aa24.4■■□□□ 1.5
U2AF1-204ENST00000459639 ZNF789Q5FWF6 425 aa24.4■■□□□ 1.5
U2AF1-204ENST00000459639 SFTPA1Q8IWL2 248 aa24.4■■□□□ 1.5
U2AF1-204ENST00000459639 ZNF366Q8N895 744 aa24.4■■□□□ 1.5
U2AF1-204ENST00000459639 CSGALNACT1Q8TDX6 532 aa24.4■■□□□ 1.5
U2AF1-204ENST00000459639 FAM161BQ96MY7 647 aa24.4■■□□□ 1.5
U2AF1-204ENST00000459639 FAM111AQ96PZ2 611 aa24.4■■□□□ 1.5
U2AF1-204ENST00000459639 VPS11Q9H270 941 aa24.4■■□□□ 1.5
U2AF1-204ENST00000459639 GRID1Q9ULK0 1009 aa24.4■■□□□ 1.5
U2AF1-204ENST00000459639 A0A096LPK6 155 aa24.39■■□□□ 1.49
U2AF1-204ENST00000459639 CLDN7O95471 211 aa24.39■■□□□ 1.49
U2AF1-204ENST00000459639 GSTA1P08263 222 aa24.39■■□□□ 1.49
U2AF1-204ENST00000459639 NFKBIAP25963 317 aa24.39■■□□□ 1.49
U2AF1-204ENST00000459639 PEX6Q13608 980 aa24.39■■□□□ 1.49
U2AF1-204ENST00000459639 ZKSCAN8Q15776 578 aaPredicted RBP24.39■■□□□ 1.49
U2AF1-204ENST00000459639 ZNF805Q5CZA5 627 aa24.39■■□□□ 1.49
U2AF1-204ENST00000459639 CRTC1Q6UUV9 634 aa24.39■■□□□ 1.49
U2AF1-204ENST00000459639 LDB1Q86U70 411 aaPredicted RBP24.39■■□□□ 1.49
U2AF1-204ENST00000459639 SLC41A1Q8IVJ1 513 aa24.39■■□□□ 1.49
U2AF1-204ENST00000459639 SUGP1Q8IWZ8 645 aaKnown RBP24.39■■□□□ 1.49
U2AF1-204ENST00000459639 GPATCH11Q8N954 259 aa24.39■■□□□ 1.49
U2AF1-204ENST00000459639 ELMO2Q96JJ3 720 aa24.39■■□□□ 1.49
U2AF1-204ENST00000459639 THAP10Q9P2Z0 257 aaPredicted RBP24.39■■□□□ 1.49
U2AF1-204ENST00000459639 ANKRD6Q9Y2G4 727 aa24.39■■□□□ 1.49
U2AF1-204ENST00000459639 PRNPP04156 253 aa24.38■■□□□ 1.49
U2AF1-204ENST00000459639 C2P06681 752 aa24.38■■□□□ 1.49
U2AF1-204ENST00000459639 PMLP29590 882 aa24.38■■□□□ 1.49
U2AF1-204ENST00000459639 SEC24CP53992 1094 aa24.38■■□□□ 1.49
U2AF1-204ENST00000459639 RAB10P61026 200 aa24.38■■□□□ 1.49
U2AF1-204ENST00000459639 XIAPP98170 497 aa24.38■■□□□ 1.49
U2AF1-204ENST00000459639 MLLT1Q03111 559 aaPredicted RBP24.38■■□□□ 1.49
U2AF1-204ENST00000459639 SMAD4Q13485 552 aaKnown RBP24.38■■□□□ 1.49
U2AF1-204ENST00000459639 TAF1BQ53T94 588 aaPredicted RBP24.38■■□□□ 1.49
U2AF1-204ENST00000459639 PPM1JQ5JR12 505 aa24.38■■□□□ 1.49
U2AF1-204ENST00000459639 AARS2Q5JTZ9 985 aaKnown RBP24.38■■□□□ 1.49
U2AF1-204ENST00000459639 SERPINA13PQ6UXR4 307 aa24.38■■□□□ 1.49
U2AF1-204ENST00000459639 KYAT3Q6YP21 454 aaKnown RBP24.38■■□□□ 1.49
U2AF1-204ENST00000459639 OR8D1Q8WZ84 308 aa24.38■■□□□ 1.49
U2AF1-204ENST00000459639 CHMP6Q96FZ7 201 aa24.38■■□□□ 1.49
U2AF1-204ENST00000459639 ZNF317Q96PQ6 595 aaPredicted RBP24.38■■□□□ 1.49
U2AF1-204ENST00000459639 C12orf65Q9H3J6 166 aaKnown RBP24.38■■□□□ 1.49
U2AF1-204ENST00000459639 VPS9D1Q9Y2B5 631 aa24.38■■□□□ 1.49
U2AF1-204ENST00000459639 UPK3BL1B0FP48 263 aa24.37■■□□□ 1.49
U2AF1-204ENST00000459639 UPK3BL2E5RIL1 263 aa24.37■■□□□ 1.49
U2AF1-204ENST00000459639 STMN1P16949 149 aa24.37■■□□□ 1.49
U2AF1-204ENST00000459639 CRABP2P29373 138 aa24.37■■□□□ 1.49
U2AF1-204ENST00000459639 PDK4Q16654 411 aa24.37■■□□□ 1.49
U2AF1-204ENST00000459639 C9orf64Q5T6V5 341 aa24.37■■□□□ 1.49
U2AF1-204ENST00000459639 RNF187Q5TA31 235 aaPredicted RBP24.37■■□□□ 1.49
U2AF1-204ENST00000459639 LRRC66Q68CR7 880 aa24.37■■□□□ 1.49
U2AF1-204ENST00000459639 CLEC14AQ86T13 490 aa24.37■■□□□ 1.49
U2AF1-204ENST00000459639 TSPAN33Q86UF1 283 aa24.37■■□□□ 1.49
U2AF1-204ENST00000459639 LCA5Q86VQ0 697 aa24.37■■□□□ 1.49
U2AF1-204ENST00000459639 CBARPQ8N350 705 aaPredicted RBP24.37■■□□□ 1.49
U2AF1-204ENST00000459639 TSPAN17Q96FV3 270 aa24.37■■□□□ 1.49
U2AF1-204ENST00000459639 OMDQ99983 421 aa24.37■■□□□ 1.49
U2AF1-204ENST00000459639 APPL1Q9UKG1 709 aa24.37■■□□□ 1.49
U2AF1-204ENST00000459639 TLK1Q9UKI8 766 aa24.37■■□□□ 1.49
U2AF1-204ENST00000459639 PFDN6O15212 129 aa24.37■■□□□ 1.49
U2AF1-204ENST00000459639 CYP2A6P11509 494 aaPredicted RBP24.37■■□□□ 1.49
U2AF1-204ENST00000459639 HLA-EP13747 358 aa24.37■■□□□ 1.49
U2AF1-204ENST00000459639 TTPAP49638 278 aa24.37■■□□□ 1.49
U2AF1-204ENST00000459639 PTPN5P54829 565 aa24.37■■□□□ 1.49
U2AF1-204ENST00000459639 SLC12A2P55011 1212 aa24.37■■□□□ 1.49
U2AF1-204ENST00000459639 CACNG1Q06432 222 aa24.37■■□□□ 1.49
U2AF1-204ENST00000459639 ELAVL3Q14576 367 aaKnown RBP24.37■■□□□ 1.49
U2AF1-204ENST00000459639 E2F5Q15329 346 aa24.37■■□□□ 1.49
U2AF1-204ENST00000459639 RBM20Q5T481 1227 aaKnown RBP24.37■■□□□ 1.49
U2AF1-204ENST00000459639 RAPH1Q70E73 1250 aa24.37■■□□□ 1.49
U2AF1-204ENST00000459639 TMIEQ8NEW7 156 aa24.37■■□□□ 1.49
U2AF1-204ENST00000459639 UBE2ZQ9H832 354 aaPredicted RBP24.37■■□□□ 1.49
U2AF1-204ENST00000459639 CAMSAP3Q9P1Y5 1249 aaPredicted RBP24.37■■□□□ 1.49
U2AF1-204ENST00000459639 B4GALT6Q9UBX8 382 aa24.37■■□□□ 1.49
U2AF1-204ENST00000459639 STARD13Q9Y3M8 1113 aa24.37■■□□□ 1.49
U2AF1-204ENST00000459639 SLC30A1Q9Y6M5 507 aa24.37■■□□□ 1.49
U2AF1-204ENST00000459639 ZNF30P17039 623 aa24.36■■□□□ 1.49
U2AF1-204ENST00000459639 SAT1P21673 171 aa24.36■■□□□ 1.49
U2AF1-204ENST00000459639 LHCGRP22888 699 aa24.36■■□□□ 1.49
U2AF1-204ENST00000459639 TAS2R39P59534 338 aa24.36■■□□□ 1.49
U2AF1-204ENST00000459639 AAK1Q2M2I8 961 aa24.36■■□□□ 1.49
U2AF1-204ENST00000459639 ZRANB3Q5FWF4 1079 aa24.36■■□□□ 1.49
U2AF1-204ENST00000459639 FAM45BPQ6NSW5 357 aa24.36■■□□□ 1.49
U2AF1-204ENST00000459639 RGS9BPQ6ZS82 235 aa24.36■■□□□ 1.49
U2AF1-204ENST00000459639 STK40Q8N2I9 435 aa24.36■■□□□ 1.49
U2AF1-204ENST00000459639 FAM45AQ8TCE6 357 aa24.36■■□□□ 1.49
U2AF1-204ENST00000459639 C5orf42Q9H799 3197 aa24.36■■□□□ 1.49
U2AF1-204ENST00000459639 C2CD4DB7Z1M9 353 aa24.35■■□□□ 1.49
U2AF1-204ENST00000459639 MBTPS2O43462 519 aa24.35■■□□□ 1.49
U2AF1-204ENST00000459639 TOP3BO95985 862 aaKnown RBP24.35■■□□□ 1.49
U2AF1-204ENST00000459639 SLC35E2BP0CK96 405 aa24.35■■□□□ 1.49
U2AF1-204ENST00000459639 PRSS56P0CW18 603 aa24.35■■□□□ 1.49
U2AF1-204ENST00000459639 COL6A2P12110 1019 aa24.35■■□□□ 1.49
U2AF1-204ENST00000459639 KCNA5P22460 613 aa24.35■■□□□ 1.49
U2AF1-204ENST00000459639 VIPR1P32241 457 aa24.35■■□□□ 1.49
U2AF1-204ENST00000459639 SPAM1P38567 509 aa24.35■■□□□ 1.49
U2AF1-204ENST00000459639 IL12RB1P42701 662 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms