RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 ZIK1Q3SY52 487 aaPredicted RBP19.57■□□□□ 0.72
CNEP1R1-203ENST00000458059 TCF12Q99081 682 aa19.57■□□□□ 0.72
CNEP1R1-203ENST00000458059 CLK4Q9HAZ1 481 aaKnown RBP19.57■□□□□ 0.72
CNEP1R1-203ENST00000458059 CMTM6Q9NX76 183 aa19.57■□□□□ 0.72
CNEP1R1-203ENST00000458059 CLEC11AQ9Y240 323 aa19.57■□□□□ 0.72
CNEP1R1-203ENST00000458059 PTCH2Q9Y6C5 1203 aa19.57■□□□□ 0.72
CNEP1R1-203ENST00000458059 NYNRINQ9P2P1 1898 aaKnown RBP19.57■□□□□ 0.72
CNEP1R1-203ENST00000458059 EI24O14681 340 aa19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 EMP3P54852 163 aa19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 CDC42EP1Q00587 391 aa19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 SEMA3AQ14563 771 aa19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 DDR2Q16832 855 aa19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 SIRPB2Q5JXA9 342 aa19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 OTUD3Q5T2D3 398 aaPredicted RBP19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 PIK3R6Q5UE93 754 aa19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 KDELC1Q6UW63 502 aa19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 PLEKHH3Q7Z736 793 aa19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 CMTR2Q8IYT2 770 aaKnown RBP19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 MAGEE2Q8TD90 523 aaPredicted RBP19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 UBXN10Q96LJ8 280 aa19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 NAA50Q9GZZ1 169 aaKnown RBP19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 RRN3Q9NYV6 651 aa19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 MIA3Q5JRA6 1907 aa19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 SUPT3HB4E1H0 165 aa19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 S1PR4O95977 384 aa19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 LEPRP48357 1165 aaKnown RBP19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 CLCN5P51795 746 aa19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 PSMD5Q16401 504 aa19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 MARC1Q5VT66 337 aa19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 GPR107Q5VW38 600 aa19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 KLHL35Q6PF15 583 aa19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 GPR141Q7Z602 305 aa19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 PCYOX1LQ8NBM8 494 aa19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 MIPOL1Q8TD10 442 aa19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 FAR2Q96K12 515 aa19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 ACOX2Q99424 681 aa19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 ADI1Q9BV57 179 aa19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 TUBB1Q9H4B7 451 aa19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 DNAAF2Q9NVR5 837 aaKnown RBP19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 ENPP3O14638 875 aa19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 B4GAT1O43505 415 aa19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 SOAT2O75908 522 aa19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 HOXD8P13378 290 aaPredicted RBP19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 ZNF549Q6P9A3 640 aa19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 ERMP1Q7Z2K6 904 aa19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 SCD5Q86SK9 330 aa19.56■□□□□ 0.72
CNEP1R1-203ENST00000458059 MYADML2A6NDP7 307 aa19.55■□□□□ 0.72
CNEP1R1-203ENST00000458059 PENKP01210 267 aaPredicted RBP19.55■□□□□ 0.72
CNEP1R1-203ENST00000458059 UGT3A2Q3SY77 523 aa19.55■□□□□ 0.72
CNEP1R1-203ENST00000458059 DUS1LQ6P1R4 473 aaKnown RBP19.55■□□□□ 0.72
CNEP1R1-203ENST00000458059 FAM43BQ6ZT52 329 aaPredicted RBP19.55■□□□□ 0.72
CNEP1R1-203ENST00000458059 TMEM86AQ8N2M4 240 aa19.55■□□□□ 0.72
CNEP1R1-203ENST00000458059 RTL3Q8N8U3 475 aaKnown RBP19.55■□□□□ 0.72
CNEP1R1-203ENST00000458059 CCDC126Q96EE4 140 aa19.55■□□□□ 0.72
CNEP1R1-203ENST00000458059 EXOC2Q96KP1 924 aa19.55■□□□□ 0.72
CNEP1R1-203ENST00000458059 SLC38A7Q9NVC3 462 aa19.55■□□□□ 0.72
CNEP1R1-203ENST00000458059 TBC1D13Q9NVG8 400 aa19.55■□□□□ 0.72
CNEP1R1-203ENST00000458059 NDUFAF1Q9Y375 327 aa19.55■□□□□ 0.72
CNEP1R1-203ENST00000458059 GOT2P00505 430 aaKnown RBP19.55■□□□□ 0.72
CNEP1R1-203ENST00000458059 PCNAP12004 261 aa19.55■□□□□ 0.72
CNEP1R1-203ENST00000458059 ADAM17P78536 824 aa19.55■□□□□ 0.72
CNEP1R1-203ENST00000458059 EFEMP1Q12805 493 aa19.55■□□□□ 0.72
CNEP1R1-203ENST00000458059 GRB14Q14449 540 aa19.55■□□□□ 0.72
CNEP1R1-203ENST00000458059 TFAP2CQ92754 450 aa19.55■□□□□ 0.72
CNEP1R1-203ENST00000458059 TSPAN17Q96FV3 270 aa19.55■□□□□ 0.72
CNEP1R1-203ENST00000458059 VPS50Q96JG6 964 aa19.55■□□□□ 0.72
CNEP1R1-203ENST00000458059 THEGQ9P2T0 379 aa19.55■□□□□ 0.72
CNEP1R1-203ENST00000458059 DLGAP1O14490 977 aa19.54■□□□□ 0.72
CNEP1R1-203ENST00000458059 AZIN1O14977 448 aa19.54■□□□□ 0.72
CNEP1R1-203ENST00000458059 HNRNPCP07910 306 aaKnown RBP eCLIP19.54■□□□□ 0.72
CNEP1R1-203ENST00000458059 AGTR2P50052 363 aa19.54■□□□□ 0.72
CNEP1R1-203ENST00000458059 CDK9P50750 372 aaKnown RBP19.54■□□□□ 0.72
CNEP1R1-203ENST00000458059 UPP1Q16831 310 aa19.54■□□□□ 0.72
CNEP1R1-203ENST00000458059 USP41Q3LFD5 358 aa19.54■□□□□ 0.72
CNEP1R1-203ENST00000458059 OVOS1Q6IE37 1185 aa19.54■□□□□ 0.72
CNEP1R1-203ENST00000458059 CLYBLQ8N0X4 340 aa19.54■□□□□ 0.72
CNEP1R1-203ENST00000458059 MIER2Q8N344 545 aa19.54■□□□□ 0.72
CNEP1R1-203ENST00000458059 CALML6Q8TD86 181 aa19.54■□□□□ 0.72
CNEP1R1-203ENST00000458059 C12orf43Q96C57 262 aaKnown RBP19.54■□□□□ 0.72
CNEP1R1-203ENST00000458059 PRKD2Q9BZL6 878 aa19.54■□□□□ 0.72
CNEP1R1-203ENST00000458059 MRPL40Q9NQ50 206 aaKnown RBP19.54■□□□□ 0.72
CNEP1R1-203ENST00000458059 POLR3BQ9NW08 1133 aaPredicted RBP19.54■□□□□ 0.72
CNEP1R1-203ENST00000458059 GIPC1O14908 333 aa19.54■□□□□ 0.72
CNEP1R1-203ENST00000458059 ARPC2O15144 300 aa19.54■□□□□ 0.72
CNEP1R1-203ENST00000458059 CAPNS1P04632 268 aa19.54■□□□□ 0.72
CNEP1R1-203ENST00000458059 DNAJB2P25686 324 aa19.54■□□□□ 0.72
CNEP1R1-203ENST00000458059 PSMA4P25789 261 aaKnown RBP19.54■□□□□ 0.72
CNEP1R1-203ENST00000458059 HERVK_113P63132 956 aa19.54■□□□□ 0.72
CNEP1R1-203ENST00000458059 TRAP1Q12931 704 aaKnown RBP19.54■□□□□ 0.72
CNEP1R1-203ENST00000458059 NFYCQ13952 458 aa19.54■□□□□ 0.72
CNEP1R1-203ENST00000458059 METTL23Q86XA0 190 aa19.54■□□□□ 0.72
CNEP1R1-203ENST00000458059 SPATA2LQ8IUW3 424 aaPredicted RBP19.54■□□□□ 0.72
CNEP1R1-203ENST00000458059 SLC22A9Q8IVM8 553 aa19.54■□□□□ 0.72
CNEP1R1-203ENST00000458059 ERVK-6Q9BXR3 956 aa19.54■□□□□ 0.72
CNEP1R1-203ENST00000458059 SLC25A51Q9H1U9 297 aa19.54■□□□□ 0.72
CNEP1R1-203ENST00000458059 POLG2Q9UHN1 485 aa19.54■□□□□ 0.72
CNEP1R1-203ENST00000458059 IKZF3Q9UKT9 509 aa19.54■□□□□ 0.72
CNEP1R1-203ENST00000458059 PDE4DIPQ5VU43 2346 aa19.54■□□□□ 0.72
CNEP1R1-203ENST00000458059 FXYD1O00168 92 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 ODC1P11926 461 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms