RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 NAT10Q9H0A0 1025 aaKnown RBP21.51■■□□□ 1.03
CPNE1-220ENST00000458038 SEMA6CQ9H3T2 930 aa21.51■■□□□ 1.03
CPNE1-220ENST00000458038 MAST4O15021 2626 aa21.5■■□□□ 1.03
CPNE1-220ENST00000458038 IVLP07476 585 aa21.5■■□□□ 1.03
CPNE1-220ENST00000458038 ALDH4A1P30038 563 aa21.5■■□□□ 1.03
CPNE1-220ENST00000458038 ETV5P41161 510 aa21.5■■□□□ 1.03
CPNE1-220ENST00000458038 PRKCIP41743 596 aa21.5■■□□□ 1.03
CPNE1-220ENST00000458038 CDK3Q00526 305 aa21.5■■□□□ 1.03
CPNE1-220ENST00000458038 DPTQ07507 201 aa21.5■■□□□ 1.03
CPNE1-220ENST00000458038 TMPRSS9Q7Z410 1059 aa21.5■■□□□ 1.03
CPNE1-220ENST00000458038 SFTPA2Q8IWL1 248 aa21.5■■□□□ 1.03
CPNE1-220ENST00000458038 PELI3Q8N2H9 469 aa21.5■■□□□ 1.03
CPNE1-220ENST00000458038 HAUS4Q9H6D7 363 aa21.5■■□□□ 1.03
CPNE1-220ENST00000458038 NOD2Q9HC29 1040 aa21.5■■□□□ 1.03
CPNE1-220ENST00000458038 RTN4Q9NQC3 1192 aaKnown RBP21.5■■□□□ 1.03
CPNE1-220ENST00000458038 SLC17A4Q9Y2C5 497 aa21.5■■□□□ 1.03
CPNE1-220ENST00000458038 PPIL1Q9Y3C6 166 aa21.5■■□□□ 1.03
CPNE1-220ENST00000458038 ZFC3H1O60293 1989 aaKnown RBP21.49■■□□□ 1.03
CPNE1-220ENST00000458038 LRRC53A6NM62 1247 aa21.49■■□□□ 1.03
CPNE1-220ENST00000458038 C9orf172C9J069 976 aa21.49■■□□□ 1.03
CPNE1-220ENST00000458038 MAFKO60675 156 aa21.49■■□□□ 1.03
CPNE1-220ENST00000458038 WISP1O95388 367 aa21.49■■□□□ 1.03
CPNE1-220ENST00000458038 PEX11BO96011 259 aa21.49■■□□□ 1.03
CPNE1-220ENST00000458038 SERPINB6P35237 376 aa21.49■■□□□ 1.03
CPNE1-220ENST00000458038 GNPDA1P46926 289 aa21.49■■□□□ 1.03
CPNE1-220ENST00000458038 CDH6P55285 790 aa21.49■■□□□ 1.03
CPNE1-220ENST00000458038 MAZP56270 477 aaKnown RBP21.49■■□□□ 1.03
CPNE1-220ENST00000458038 OR1D5P58170 312 aa21.49■■□□□ 1.03
CPNE1-220ENST00000458038 AMZ1Q400G9 498 aa21.49■■□□□ 1.03
CPNE1-220ENST00000458038 FILIP1LQ4L180 1135 aa21.49■■□□□ 1.03
CPNE1-220ENST00000458038 MARC1Q5VT66 337 aa21.49■■□□□ 1.03
CPNE1-220ENST00000458038 USP45Q70EL2 814 aa21.49■■□□□ 1.03
CPNE1-220ENST00000458038 POLNQ7Z5Q5 900 aa21.49■■□□□ 1.03
CPNE1-220ENST00000458038 ZFAND4Q86XD8 727 aa21.49■■□□□ 1.03
CPNE1-220ENST00000458038 CCDC112Q8NEF3 446 aa21.49■■□□□ 1.03
CPNE1-220ENST00000458038 ZNF653Q96CK0 615 aa21.49■■□□□ 1.03
CPNE1-220ENST00000458038 TAAR9Q96RI9 348 aa21.49■■□□□ 1.03
CPNE1-220ENST00000458038 MCCC1Q96RQ3 725 aaPredicted RBP21.49■■□□□ 1.03
CPNE1-220ENST00000458038 TRIM7Q9C029 511 aa21.49■■□□□ 1.03
CPNE1-220ENST00000458038 RDH14Q9HBH5 336 aa21.49■■□□□ 1.03
CPNE1-220ENST00000458038 STARD5Q9NSY2 213 aa21.49■■□□□ 1.03
CPNE1-220ENST00000458038 SUFUQ9UMX1 484 aa21.49■■□□□ 1.03
CPNE1-220ENST00000458038 PCDHGA4Q9Y5G9 962 aa21.49■■□□□ 1.03
CPNE1-220ENST00000458038 GOLGA6L22H0YM25 854 aa21.48■■□□□ 1.03
CPNE1-220ENST00000458038 STMND1H3BQB6 276 aa21.48■■□□□ 1.03
CPNE1-220ENST00000458038 ECEL1O95672 775 aa21.48■■□□□ 1.03
CPNE1-220ENST00000458038 FUCA1P04066 466 aa21.48■■□□□ 1.03
CPNE1-220ENST00000458038 PYGLP06737 847 aa21.48■■□□□ 1.03
CPNE1-220ENST00000458038 CD1CP29017 333 aa21.48■■□□□ 1.03
CPNE1-220ENST00000458038 ETV3P41162 512 aa21.48■■□□□ 1.03
CPNE1-220ENST00000458038 NFATC3Q12968 1075 aa21.48■■□□□ 1.03
CPNE1-220ENST00000458038 PIGHQ14442 188 aaPredicted RBP21.48■■□□□ 1.03
CPNE1-220ENST00000458038 C16orf72Q14CZ0 275 aa21.48■■□□□ 1.03
CPNE1-220ENST00000458038 ARMC12Q5T9G4 340 aa21.48■■□□□ 1.03
CPNE1-220ENST00000458038 DENND2CQ68D51 928 aa21.48■■□□□ 1.03
CPNE1-220ENST00000458038 ZNF571Q7Z3V5 609 aaPredicted RBP21.48■■□□□ 1.03
CPNE1-220ENST00000458038 HSD11B1LQ7Z5J1 315 aa21.48■■□□□ 1.03
CPNE1-220ENST00000458038 NLRP8Q86W28 1048 aa21.48■■□□□ 1.03
CPNE1-220ENST00000458038 ATPAF2Q8N5M1 289 aa21.48■■□□□ 1.03
CPNE1-220ENST00000458038 AOPEPQ8N6M6 819 aa21.48■■□□□ 1.03
CPNE1-220ENST00000458038 OR4D9Q8NGE8 314 aa21.48■■□□□ 1.03
CPNE1-220ENST00000458038 EXTL1Q92935 676 aa21.48■■□□□ 1.03
CPNE1-220ENST00000458038 COL26A1Q96A83 441 aa21.48■■□□□ 1.03
CPNE1-220ENST00000458038 SCARF2Q96GP6 870 aaPredicted RBP21.48■■□□□ 1.03
CPNE1-220ENST00000458038 CDH19Q9H159 772 aa21.48■■□□□ 1.03
CPNE1-220ENST00000458038 FOXJ2Q9P0K8 574 aa21.48■■□□□ 1.03
CPNE1-220ENST00000458038 PCDHGA3Q9Y5H0 932 aa21.48■■□□□ 1.03
CPNE1-220ENST00000458038 SDK2Q58EX2 2172 aa21.48■■□□□ 1.03
CPNE1-220ENST00000458038 NAV2Q8IVL1 2488 aa21.47■■□□□ 1.03
CPNE1-220ENST00000458038 IGHV5-10-1A0A0J9YXX1 117 aa21.47■■□□□ 1.03
CPNE1-220ENST00000458038 TTC24A2A3L6 582 aaPredicted RBP21.47■■□□□ 1.03
CPNE1-220ENST00000458038 PGLSO95336 258 aa21.47■■□□□ 1.03
CPNE1-220ENST00000458038 AMPD1P23109 780 aa21.47■■□□□ 1.03
CPNE1-220ENST00000458038 ADCY8P40145 1251 aa21.47■■□□□ 1.03
CPNE1-220ENST00000458038 MMP13P45452 471 aa21.47■■□□□ 1.03
CPNE1-220ENST00000458038 CSRP3P50461 194 aa21.47■■□□□ 1.03
CPNE1-220ENST00000458038 ATP1A2P50993 1020 aa21.47■■□□□ 1.03
CPNE1-220ENST00000458038 LIMK2P53671 638 aa21.47■■□□□ 1.03
CPNE1-220ENST00000458038 CTBSQ01459 385 aa21.47■■□□□ 1.03
CPNE1-220ENST00000458038 KLHL30Q0D2K2 578 aa21.47■■□□□ 1.03
CPNE1-220ENST00000458038 RAET1GQ6H3X3 334 aa21.47■■□□□ 1.03
CPNE1-220ENST00000458038 Q6ZVL8 140 aa21.47■■□□□ 1.03
CPNE1-220ENST00000458038 PRICKLE2Q7Z3G6 844 aa21.47■■□□□ 1.03
CPNE1-220ENST00000458038 TP53INP2Q8IXH6 220 aa21.47■■□□□ 1.03
CPNE1-220ENST00000458038 RAVER1Q8IY67 606 aaKnown RBP21.47■■□□□ 1.03
CPNE1-220ENST00000458038 PGBD5Q8N414 524 aa21.47■■□□□ 1.03
CPNE1-220ENST00000458038 AGBL5Q8NDL9 886 aa21.47■■□□□ 1.03
CPNE1-220ENST00000458038 TEKT4Q8WW24 435 aa21.47■■□□□ 1.03
CPNE1-220ENST00000458038 CSPG4P5Q96PW8 444 aa21.47■■□□□ 1.03
CPNE1-220ENST00000458038 ISCUQ9H1K1 167 aa21.47■■□□□ 1.03
CPNE1-220ENST00000458038 GOLGA6CA6NDK9 693 aa21.46■■□□□ 1.03
CPNE1-220ENST00000458038 GOLGA6BA6NDN3 693 aa21.46■■□□□ 1.03
CPNE1-220ENST00000458038 NPIPB15A6NHN6 443 aaPredicted RBP21.46■■□□□ 1.03
CPNE1-220ENST00000458038 DDX3XO00571 662 aaKnown RBP eCLIP21.46■■□□□ 1.031e-13■■■□□ 15.3
CPNE1-220ENST00000458038 GOLGA6DP0CG33 693 aa21.46■■□□□ 1.03
CPNE1-220ENST00000458038 ZNF30P17039 623 aa21.46■■□□□ 1.03
CPNE1-220ENST00000458038 CES1P23141 567 aa21.46■■□□□ 1.03
CPNE1-220ENST00000458038 AK4P27144 223 aaPredicted RBP21.46■■□□□ 1.03
CPNE1-220ENST00000458038 TRAF2Q12933 501 aa21.46■■□□□ 1.03
CPNE1-220ENST00000458038 SLC30A9Q6PML9 568 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms