RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 RARRES1P49788 294 aa12.35□□□□□ -0.43
NEDD4L-208ENST00000456173 MARSP56192 900 aaKnown RBP12.35□□□□□ -0.43
NEDD4L-208ENST00000456173 TMEM62Q0P6H9 643 aa12.35□□□□□ -0.43
NEDD4L-208ENST00000456173 OVOS1Q6IE37 1185 aa12.35□□□□□ -0.43
NEDD4L-208ENST00000456173 GPSM1Q86YR5 675 aa12.35□□□□□ -0.43
NEDD4L-208ENST00000456173 WDR49Q8IV35 697 aa12.35□□□□□ -0.43
NEDD4L-208ENST00000456173 IQCF2Q8IXL9 164 aa12.35□□□□□ -0.43
NEDD4L-208ENST00000456173 CPB2Q96IY4 423 aa12.35□□□□□ -0.43
NEDD4L-208ENST00000456173 TAAR1Q96RJ0 339 aa12.35□□□□□ -0.43
NEDD4L-208ENST00000456173 RACGAP1Q9H0H5 632 aa12.35□□□□□ -0.43
NEDD4L-208ENST00000456173 COMMD3Q9UBI1 195 aa12.35□□□□□ -0.43
NEDD4L-208ENST00000456173 KIAA1257Q9ULG3 409 aa12.35□□□□□ -0.43
NEDD4L-208ENST00000456173 MID1O15344 667 aa12.35□□□□□ -0.43
NEDD4L-208ENST00000456173 KLRK1P26718 216 aa12.35□□□□□ -0.43
NEDD4L-208ENST00000456173 PPP1R8Q12972 351 aaKnown RBP12.35□□□□□ -0.43
NEDD4L-208ENST00000456173 IKBKEQ14164 716 aa12.35□□□□□ -0.43
NEDD4L-208ENST00000456173 HKDC1Q2TB90 917 aa12.35□□□□□ -0.43
NEDD4L-208ENST00000456173 TKFCQ3LXA3 575 aa12.35□□□□□ -0.43
NEDD4L-208ENST00000456173 SPATA2LQ8IUW3 424 aaPredicted RBP12.35□□□□□ -0.43
NEDD4L-208ENST00000456173 SYT12Q8IV01 421 aa12.35□□□□□ -0.43
NEDD4L-208ENST00000456173 C4orf32Q8N8J7 132 aa12.35□□□□□ -0.43
NEDD4L-208ENST00000456173 OR52B2Q96RD2 323 aa12.35□□□□□ -0.43
NEDD4L-208ENST00000456173 ADAMTS13Q76LX8 1427 aa12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 KRBA1A5PL33 1030 aa12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 TGFB1I1O43294 461 aa12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 UMPSP11172 480 aa12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 AOC1P19801 751 aa12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 RPL35P42766 123 aaKnown RBP12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 HIST2H2ACQ16777 129 aaPredicted RBP12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 TIGD6Q17RP2 521 aa12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 HIST2H2AA3Q6FI13 130 aa12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 ZNF431Q8TF32 576 aaPredicted RBP12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 TNFRSF25Q93038 417 aa12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 HSFY1Q96LI6 401 aa12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 PTBP2Q9UKA9 531 aaKnown RBP12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 TRHDEQ9UKU6 1024 aa12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 A8MU76 341 aa12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 APBA3O96018 575 aa12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 HARS2P49590 506 aaKnown RBP12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 ALDH3A2P51648 485 aa12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 NDST1P52848 882 aa12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 MOGSQ13724 837 aa12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 MGAT5BQ3V5L5 792 aa12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 STYK1Q6J9G0 422 aa12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 ANKRD13BQ86YJ7 626 aa12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 C10orf53Q8N6V4 93 aa12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 ZNF614Q8N883 585 aa12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 STAG3L4Q8TBR4 150 aa12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 ZBTB45Q96K62 511 aaPredicted RBP12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 SNRNP25Q9BV90 132 aaKnown RBP12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 ARHGAP28Q9P2N2 729 aa12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 PHF11Q9UIL8 331 aa12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 IQCMA0A1B0GVH7 501 aa12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 ZNF879B4DU55 563 aa12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 AQP1P29972 269 aa12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 PIK3CGP48736 1102 aa12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 ZNF404Q494X3 552 aa12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 FAM196AQ6ZSG2 479 aa12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 SPAG16Q8N0X2 631 aa12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 TTLL6Q8N841 843 aa12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 TTC29Q8NA56 475 aaPredicted RBP12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 BPIFB1Q8TDL5 484 aa12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 EMID1Q96A84 441 aaPredicted RBP12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 PRR11Q96HE9 360 aaPredicted RBP12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 KREMEN1Q96MU8 473 aa12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 CINPQ9BW66 212 aaPredicted RBP12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 ADGRE3Q9BY15 652 aa12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 MIEF1Q9NQG6 463 aa12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 QRICH2Q9H0J4 1663 aa12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 TNS3Q68CZ2 1445 aa12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 ZC3H4Q9UPT8 1303 aaKnown RBP12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 LMTK2Q8IWU2 1503 aa12.34□□□□□ -0.43
NEDD4L-208ENST00000456173 XPNPEP2O43895 674 aa12.33□□□□□ -0.43
NEDD4L-208ENST00000456173 STAU1O95793 577 aaKnown RBP12.33□□□□□ -0.43
NEDD4L-208ENST00000456173 MATN1P21941 496 aa12.33□□□□□ -0.43
NEDD4L-208ENST00000456173 AP2S1P53680 142 aaPredicted RBP12.33□□□□□ -0.43
NEDD4L-208ENST00000456173 MPP1Q00013 466 aa12.33□□□□□ -0.43
NEDD4L-208ENST00000456173 MAB21L1Q13394 359 aa12.33□□□□□ -0.43
NEDD4L-208ENST00000456173 PCID2Q5JVF3 399 aa12.33□□□□□ -0.43
NEDD4L-208ENST00000456173 C1orf186Q6ZWK4 172 aa12.33□□□□□ -0.43
NEDD4L-208ENST00000456173 PRICKLE1Q96MT3 831 aaPredicted RBP12.33□□□□□ -0.43
NEDD4L-208ENST00000456173 OR52E6Q96RD3 313 aa12.33□□□□□ -0.43
NEDD4L-208ENST00000456173 DDX43Q9NXZ2 648 aaKnown RBP12.33□□□□□ -0.43
NEDD4L-208ENST00000456173 SNCAIPQ9Y6H5 919 aa12.33□□□□□ -0.43
NEDD4L-208ENST00000456173 CENPBD1B2RD01 187 aa12.33□□□□□ -0.44
NEDD4L-208ENST00000456173 H0YJX3 145 aa12.33□□□□□ -0.44
NEDD4L-208ENST00000456173 DYRK3O43781 588 aa12.33□□□□□ -0.44
NEDD4L-208ENST00000456173 RFPL2O75678 378 aa12.33□□□□□ -0.44
NEDD4L-208ENST00000456173 ENDOD1O94919 500 aa12.33□□□□□ -0.44
NEDD4L-208ENST00000456173 ICAM3P32942 547 aa12.33□□□□□ -0.44
NEDD4L-208ENST00000456173 ALDH9A1P49189 494 aa12.33□□□□□ -0.44
NEDD4L-208ENST00000456173 SMARCB1Q12824 385 aa12.33□□□□□ -0.44
NEDD4L-208ENST00000456173 CYP1B1Q16678 543 aa12.33□□□□□ -0.44
NEDD4L-208ENST00000456173 SWI5Q1ZZU3 235 aa12.33□□□□□ -0.44
NEDD4L-208ENST00000456173 RBM48Q5RL73 367 aaKnown RBP12.33□□□□□ -0.44
NEDD4L-208ENST00000456173 TRMT10BQ6PF06 316 aaKnown RBP12.33□□□□□ -0.44
NEDD4L-208ENST00000456173 PHF13Q86YI8 300 aaPredicted RBP12.33□□□□□ -0.44
NEDD4L-208ENST00000456173 CLCA2Q9UQC9 943 aa12.33□□□□□ -0.44
NEDD4L-208ENST00000456173 OR10H3O60404 316 aa12.33□□□□□ -0.44
NEDD4L-208ENST00000456173 MAGEA2P43356 314 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms