RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 ARSDP51689 593 aa10.73□□□□□ -0.69
SYPL1-202ENST00000455385 RPS21P63220 83 aaKnown RBP10.73□□□□□ -0.69
SYPL1-202ENST00000455385 TMPRSS15P98073 1019 aa10.73□□□□□ -0.69
SYPL1-202ENST00000455385 CREB5Q02930 508 aa10.73□□□□□ -0.69
SYPL1-202ENST00000455385 ACOX1Q15067 660 aa10.73□□□□□ -0.69
SYPL1-202ENST00000455385 DNAJC21Q5F1R6 531 aaKnown RBP10.73□□□□□ -0.69
SYPL1-202ENST00000455385 TSTD2Q5T7W7 516 aa10.73□□□□□ -0.69
SYPL1-202ENST00000455385 NEK5Q6P3R8 708 aa10.73□□□□□ -0.69
SYPL1-202ENST00000455385 TMEM135Q86UB9 458 aa10.73□□□□□ -0.69
SYPL1-202ENST00000455385 LONP2Q86WA8 852 aa10.73□□□□□ -0.69
SYPL1-202ENST00000455385 ZBED8Q8IZ13 594 aa10.73□□□□□ -0.69
SYPL1-202ENST00000455385 PELI3Q8N2H9 469 aa10.73□□□□□ -0.69
SYPL1-202ENST00000455385 FBXO36Q8NEA4 188 aa10.73□□□□□ -0.69
SYPL1-202ENST00000455385 OR13J1Q8NGT2 312 aa10.73□□□□□ -0.69
SYPL1-202ENST00000455385 RUBCNQ92622 972 aa10.73□□□□□ -0.69
SYPL1-202ENST00000455385 DNAJC1Q96KC8 554 aaKnown RBP10.73□□□□□ -0.69
SYPL1-202ENST00000455385 C9orf72Q96LT7 481 aa10.73□□□□□ -0.69
SYPL1-202ENST00000455385 LRFN3Q9BTN0 628 aa10.73□□□□□ -0.69
SYPL1-202ENST00000455385 FOXP3Q9BZS1 431 aa10.73□□□□□ -0.69
SYPL1-202ENST00000455385 SUDS3Q9H7L9 328 aaPredicted RBP10.73□□□□□ -0.69
SYPL1-202ENST00000455385 TREX1Q9NSU2 369 aa10.73□□□□□ -0.69
SYPL1-202ENST00000455385 MTRF1LQ9UGC7 380 aaKnown RBP10.73□□□□□ -0.69
SYPL1-202ENST00000455385 RAB21Q9UL25 225 aa10.73□□□□□ -0.69
SYPL1-202ENST00000455385 CHMP2BQ9UQN3 213 aa10.73□□□□□ -0.69
SYPL1-202ENST00000455385 PLXND1Q9Y4D7 1925 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 ZCWPW2A0A1B0GU75 182 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 FAM237BA0A1B0GVD1 139 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 MAGEB16A2A368 324 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 LRRC72A6NJI9 287 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 STX7O15400 261 aaKnown RBP10.72□□□□□ -0.69
SYPL1-202ENST00000455385 IGHV4-34P06331 123 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 MAGEA4P43358 317 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 ANKRD20A4Q4UJ75 823 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 KDM7AQ6ZMT4 941 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 PPHLN1Q8NEY8 458 aaKnown RBP10.72□□□□□ -0.69
SYPL1-202ENST00000455385 STYXQ8WUJ0 223 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 SCAMP4Q969E2 229 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 LRRC39Q96DD0 335 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 STAMBPL1Q96FJ0 436 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 CDKN2AIPNLQ96HQ2 116 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 TBATAQ96M53 351 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 SLC17A9Q9BYT1 436 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 MRM3Q9HC36 420 aaKnown RBP10.72□□□□□ -0.69
SYPL1-202ENST00000455385 NLE1Q9NVX2 485 aaPredicted RBP10.72□□□□□ -0.69
SYPL1-202ENST00000455385 SCN8AQ9UQD0 1980 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 PSMD11O00231 422 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 GAPDHSO14556 408 aaPredicted RBP10.72□□□□□ -0.69
SYPL1-202ENST00000455385 WNT9AO14904 365 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 RAD51BO15315 384 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 EIF3HO15372 352 aaKnown RBP eCLIP10.72□□□□□ -0.69
SYPL1-202ENST00000455385 LATO43561 262 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 LZTS3O60299 673 aaPredicted RBP10.72□□□□□ -0.69
SYPL1-202ENST00000455385 TM7SF2O76062 418 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 ARNTP27540 789 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 CA5AP35218 305 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 XIAPP98170 497 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 ACVR1Q04771 509 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 KIAA1161Q6NSJ0 714 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 UNC5AQ6ZN44 842 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 TRIM69Q86WT6 500 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 SLC41A1Q8IVJ1 513 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 UNC5BQ8IZJ1 945 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 PNPLA1Q8N8W4 532 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 PYROXD1Q8WU10 500 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 PTCD2Q8WV60 388 aaKnown RBP10.72□□□□□ -0.69
SYPL1-202ENST00000455385 HDAC10Q969S8 669 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 BIRC7Q96CA5 298 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 AGAP2Q99490 1192 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 KLF6Q99612 283 aaPredicted RBP10.72□□□□□ -0.69
SYPL1-202ENST00000455385 C1QTNF1Q9BXJ1 281 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 TXLNGYQ9BZA5 131 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 PHACTR1Q9C0D0 580 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 ABCG8Q9H221 673 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 IL26Q9NPH9 171 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 IL1RAPL1Q9NZN1 696 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 SAMD15Q9P1V8 674 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 ZC3H7BQ9UGR2 993 aaKnown RBP10.72□□□□□ -0.69
SYPL1-202ENST00000455385 FKBPLQ9UIM3 349 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 SLCO1B1Q9Y6L6 691 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 RPS6KL1Q9Y6S9 549 aa10.72□□□□□ -0.69
SYPL1-202ENST00000455385 SLC31A1O15431 190 aa10.71□□□□□ -0.69
SYPL1-202ENST00000455385 GALR2O43603 387 aaPredicted RBP10.71□□□□□ -0.69
SYPL1-202ENST00000455385 FSBPO95073 299 aa10.71□□□□□ -0.69
SYPL1-202ENST00000455385 ARCN1P48444 511 aaKnown RBP10.71□□□□□ -0.69
SYPL1-202ENST00000455385 GPX6P59796 221 aa10.71□□□□□ -0.69
SYPL1-202ENST00000455385 PEX6Q13608 980 aa10.71□□□□□ -0.69
SYPL1-202ENST00000455385 AGERQ15109 404 aa10.71□□□□□ -0.69
SYPL1-202ENST00000455385 SKIDA1Q1XH10 827 aa10.71□□□□□ -0.69
SYPL1-202ENST00000455385 WSCD2Q2TBF2 565 aa10.71□□□□□ -0.69
SYPL1-202ENST00000455385 KIAA0895LQ68EN5 471 aa10.71□□□□□ -0.69
SYPL1-202ENST00000455385 RELL1Q8IUW5 271 aa10.71□□□□□ -0.69
SYPL1-202ENST00000455385 DTD2Q96FN9 168 aa10.71□□□□□ -0.69
SYPL1-202ENST00000455385 ORAI3Q9BRQ5 295 aa10.71□□□□□ -0.69
SYPL1-202ENST00000455385 SEMA4AQ9H3S1 761 aa10.71□□□□□ -0.69
SYPL1-202ENST00000455385 LRRC4CQ9HCJ2 640 aa10.71□□□□□ -0.69
SYPL1-202ENST00000455385 MBNL1Q9NR56 388 aaKnown RBP10.71□□□□□ -0.69
SYPL1-202ENST00000455385 RIMKLBQ9ULI2 386 aa10.71□□□□□ -0.69
SYPL1-202ENST00000455385 FNDC3AQ9Y2H6 1198 aaKnown RBP10.71□□□□□ -0.69
SYPL1-202ENST00000455385 PKP3Q9Y446 797 aa10.71□□□□□ -0.69
SYPL1-202ENST00000455385 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms