RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 ZNF778Q96MU6 729 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 FCRL3Q96P31 734 aaPredicted RBP11.24□□□□□ -0.61
TRAF4-206ENST00000454852 C1QTNF2Q9BXJ5 285 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 FAM126AQ9BYI3 521 aaPredicted RBP11.24□□□□□ -0.61
TRAF4-206ENST00000454852 SEMA4AQ9H3S1 761 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 EPHX3Q9H6B9 360 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 LRRC4CQ9HCJ2 640 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 C11orf16Q9NQ32 467 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 SPATA6Q9NWH7 488 aaPredicted RBP11.24□□□□□ -0.61
TRAF4-206ENST00000454852 NINJ2Q9NZG7 142 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 PKD2L2Q9NZM6 624 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 GGT7Q9UJ14 662 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 CHMP2BQ9UQN3 213 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 ITM2BQ9Y287 266 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 PKP3Q9Y446 797 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 MAD1L1Q9Y6D9 718 aa11.24□□□□□ -0.61
TRAF4-206ENST00000454852 PLXNA2O75051 1894 aa11.23□□□□□ -0.61
TRAF4-206ENST00000454852 KMT2EQ8IZD2 1858 aa11.23□□□□□ -0.61
TRAF4-206ENST00000454852 IGHV1OR15-9A0A0B4J2B8 117 aa11.23□□□□□ -0.61
TRAF4-206ENST00000454852 WNT9AO14904 365 aa11.23□□□□□ -0.61
TRAF4-206ENST00000454852 AXIN1O15169 862 aa11.23□□□□□ -0.61
TRAF4-206ENST00000454852 LAMTOR5O43504 91 aa11.23□□□□□ -0.61
TRAF4-206ENST00000454852 GPR37L1O60883 481 aa11.23□□□□□ -0.61
TRAF4-206ENST00000454852 C6P13671 934 aa11.23□□□□□ -0.61
TRAF4-206ENST00000454852 BPIP17213 487 aa11.23□□□□□ -0.61
TRAF4-206ENST00000454852 PAMP19021 973 aa11.23□□□□□ -0.61
TRAF4-206ENST00000454852 ARNTP27540 789 aa11.23□□□□□ -0.61
TRAF4-206ENST00000454852 TEAD1P28347 426 aa11.23□□□□□ -0.61
TRAF4-206ENST00000454852 AVPR2P30518 371 aa11.23□□□□□ -0.61
TRAF4-206ENST00000454852 ACSL1P33121 698 aa11.23□□□□□ -0.61
TRAF4-206ENST00000454852 GPX6P59796 221 aa11.23□□□□□ -0.61
TRAF4-206ENST00000454852 XIAPP98170 497 aa11.23□□□□□ -0.61
TRAF4-206ENST00000454852 KYNUQ16719 465 aa11.23□□□□□ -0.61
TRAF4-206ENST00000454852 BEND6Q5SZJ8 279 aaPredicted RBP11.23□□□□□ -0.61
TRAF4-206ENST00000454852 PDPK2PQ6A1A2 396 aa11.23□□□□□ -0.61
TRAF4-206ENST00000454852 ESRP1Q6NXG1 681 aaKnown RBP11.23□□□□□ -0.61
TRAF4-206ENST00000454852 CASC4Q6P4E1 433 aa11.23□□□□□ -0.61
TRAF4-206ENST00000454852 HSD11B1LQ7Z5J1 315 aa11.23□□□□□ -0.61
TRAF4-206ENST00000454852 CACUL1Q86Y37 369 aa11.23□□□□□ -0.61
TRAF4-206ENST00000454852 ANKMY2Q8IV38 441 aa11.23□□□□□ -0.61
TRAF4-206ENST00000454852 CNTN4Q8IWV2 1026 aa11.23□□□□□ -0.61
TRAF4-206ENST00000454852 PALM2Q8IXS6 379 aa11.23□□□□□ -0.61
TRAF4-206ENST00000454852 PGBD3Q8N328 593 aa11.23□□□□□ -0.61
TRAF4-206ENST00000454852 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.23□□□□□ -0.61
TRAF4-206ENST00000454852 CADM4Q8NFZ8 388 aa11.23□□□□□ -0.61
TRAF4-206ENST00000454852 OR4K2Q8NGD2 314 aa11.23□□□□□ -0.61
TRAF4-206ENST00000454852 OR13C4Q8NGS5 318 aa11.23□□□□□ -0.61
TRAF4-206ENST00000454852 OR14C36Q8NHC7 312 aa11.23□□□□□ -0.61
TRAF4-206ENST00000454852 CXorf40AQ8TE69 158 aa11.23□□□□□ -0.61
TRAF4-206ENST00000454852 GANCQ8TET4 914 aa11.23□□□□□ -0.61
TRAF4-206ENST00000454852 ERLEC1Q96DZ1 483 aa11.23□□□□□ -0.61
TRAF4-206ENST00000454852 DNAJC1Q96KC8 554 aaKnown RBP11.23□□□□□ -0.61
TRAF4-206ENST00000454852 C9orf72Q96LT7 481 aa11.23□□□□□ -0.61
TRAF4-206ENST00000454852 COL25A1Q9BXS0 654 aaPredicted RBP11.23□□□□□ -0.61
TRAF4-206ENST00000454852 EPB41L4BQ9H329 900 aa11.23□□□□□ -0.61
TRAF4-206ENST00000454852 CD93Q9NPY3 652 aa11.23□□□□□ -0.61
TRAF4-206ENST00000454852 APPL1Q9UKG1 709 aa11.23□□□□□ -0.61
TRAF4-206ENST00000454852 KCTD3Q9Y597 815 aa11.23□□□□□ -0.61
TRAF4-206ENST00000454852 LRRK1Q38SD2 2015 aa11.23□□□□□ -0.61
TRAF4-206ENST00000454852 UQCRHLA0A096LP55 91 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 TRBV5-4A0A0C4DH59 114 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 TCRBV9S1A1TA0A576 114 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 PRR33A8MZF0 331 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 NEMP1O14524 444 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 GAPDHSO14556 408 aaPredicted RBP11.22□□□□□ -0.61
TRAF4-206ENST00000454852 RIPK2O43353 540 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 MMP20O60882 483 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 RNGTTO60942 597 aaKnown RBP11.22□□□□□ -0.61
TRAF4-206ENST00000454852 TM7SF2O76062 418 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 RECQL5O94762 991 aaPredicted RBP11.22□□□□□ -0.61
TRAF4-206ENST00000454852 SEMA4FO95754 770 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 PYGLP06737 847 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 UQCRHP07919 91 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 STX2P32856 288 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 PHBP35232 272 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 SPAM1P38567 509 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 ARSDP51689 593 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 PEX6Q13608 980 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 SEPT6Q14141 434 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 LONRF1Q17RB8 773 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 GPR33Q49SQ1 333 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 USP39Q53GS9 565 aaKnown RBP11.22□□□□□ -0.61
TRAF4-206ENST00000454852 HENMT1Q5T8I9 393 aaKnown RBP11.22□□□□□ -0.61
TRAF4-206ENST00000454852 DENND2CQ68D51 928 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 SLC36A4Q6YBV0 504 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 C3orf62Q6ZUJ4 267 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 Q6ZVL8 140 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 GALNT7Q86SF2 657 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 C11orf74Q86VG3 221 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 LONP2Q86WA8 852 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 TRAM1L1Q8N609 369 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 GPR26Q8NDV2 337 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 DENND6BQ8NEG7 585 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 GPR150Q8NGU9 434 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 ZNF669Q96BR6 464 aaPredicted RBP11.22□□□□□ -0.61
TRAF4-206ENST00000454852 CERS2Q96G23 380 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 TOE1Q96GM8 510 aaKnown RBP11.22□□□□□ -0.61
TRAF4-206ENST00000454852 TBATAQ96M53 351 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 LENG8Q96PV6 779 aaPredicted RBP11.22□□□□□ -0.61
TRAF4-206ENST00000454852 WRAP53Q9BUR4 548 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms