RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 ABCA12Q86UK0 2595 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 IGHV1OR21-1A0A087WYE8 117 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 LOC101059948A0A1B0GTJ6 334 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 A0A1W2PQC6 194 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 BLACEA4D250 179 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CLEC18AA5D8T8 446 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 TRAFD1O14545 582 aaPredicted RBP5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 INPP4BO15327 924 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 FGF10O15520 208 aaPredicted RBP5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 HEXIM1O94992 359 aaKnown RBP5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 SOD1P00441 154 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 SLC4A1P02730 911 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CEACAM5P06731 702 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 PSMA2P25787 234 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CD1CP29017 333 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ADCY8P40145 1251 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ATP1A2P50993 1020 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ZNF143P52747 638 aaPredicted RBP5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 GFERP55789 205 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 UBE2HP62256 183 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 FOXK1P85037 733 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CTBSQ01459 385 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 BCL2L1Q07817 233 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 SLC10A7Q0GE19 358 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CDC20Q12834 499 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 BECN1Q14457 450 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ZNF235Q14590 738 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 IHHQ14623 411 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 DEFB109BQ30KR1 87 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 PLA2G4EQ3MJ16 856 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 INO80DQ53TQ3 878 aaPredicted RBP5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 E4F1Q66K89 784 aaPredicted RBP5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 PNCKQ6P2M8 343 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 C16orf46Q6P387 395 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 OGFOD3Q6PK18 319 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CLEC18BQ6UXF7 455 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 Q6ZVL8 140 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ARCQ7LC44 396 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 TIPARPQ7Z3E1 657 aaKnown RBP5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ZNF438Q7Z4V0 828 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 PIM3Q86V86 326 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 PGBD5Q8N414 524 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ARFGAP1Q8N6T3 406 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 MLKLQ8NB16 471 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CLEC18CQ8NCF0 446 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ATL2Q8NHH9 583 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 C9orf43Q8TAL5 461 aaPredicted RBP5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 KIAA1524Q8TCG1 905 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 GPBAR1Q8TDU6 330 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CASKIN2Q8WXE0 1202 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 STARD8Q92502 1023 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 SCAMP4Q969E2 229 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ZNF653Q96CK0 615 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ECHDC3Q96DC8 303 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 DTD2Q96FN9 168 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 COQ10AQ96MF6 247 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 PCMTD1Q96MG8 357 aaPredicted RBP5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ZNF641Q96N77 438 aaPredicted RBP5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 OR2M4Q96R27 311 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 TUBGCP5Q96RT8 1024 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 AGAP2Q99490 1192 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CNPY3Q9BT09 278 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 GSDMCQ9BYG8 508 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 BRD8Q9H0E9 1235 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CATSPERBQ9H7T0 1116 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 GPN2Q9H9Y4 310 aaPredicted RBP5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ARFGAP3Q9NP61 516 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 PHPT1Q9NRX4 125 aaPredicted RBP5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 SLC39A1Q9NY26 324 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 KCNK4Q9NYG8 393 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 KCNK6Q9Y257 313 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 TP53TG5Q9Y2B4 290 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 SIK3Q9Y2K2 1263 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 TTLL3Q9Y4R7 772 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 DOPEY1Q5JWR5 2465 aa5.98□□□□□ -1.45
HLA-DPA3-207ENST00000454398 A1L4Q6 167 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ANKRD62A6NC57 917 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ARHGAP42A6NI28 874 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 PRR19A6NJB7 356 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 TMEM110-MUSTN1A8MSY1 372 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 WASH4PA8MWX3 477 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 TMX2-CTNND1H3BSU7 103 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 TOR1BO14657 336 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 MTSS1O43312 755 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 SNX2O60749 519 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 DNAJB5O75953 348 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ATP1A1P05023 1023 aaKnown RBP5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CALB1P05937 261 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ACP5P13686 325 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ZNF28P17035 718 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ERCC2P18074 760 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 KELP23276 732 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 F8A1P23610 371 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 IL1R2P27930 398 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 VIPR1P32241 457 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CSTF2P33240 577 aaKnown RBP eCLIP5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 GJC1P36383 396 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 MLLT10P55197 1068 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 GSCP56915 257 aaPredicted RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms