RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 MOCS1Q9NZB8 636 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 RAP2CQ9Y3L5 183 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 RAD54BQ9Y620 910 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 RNF103-CHMP3A0A140T963 221 aa13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 SLC7A1P30825 629 aa13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 C19orf57Q0VDD7 668 aa13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 BSPRYQ5W0U4 402 aa13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 CYP2R1Q6VVX0 501 aa13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 LIMS2Q7Z4I7 341 aa13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 MFSD2AQ8NA29 543 aa13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 TDRD5Q8NAT2 981 aaKnown RBP13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 SCYL1Q96KG9 808 aa13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 PPP1R2P1Q96PQ5 205 aa13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 SNRNP25Q9BV90 132 aaKnown RBP13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 DDX28Q9NUL7 540 aaKnown RBP13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 CNOT6Q9ULM6 557 aaKnown RBP13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 C9IYK1 514 aa13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 HDAC3O15379 428 aa13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 ALDH1A2O94788 518 aa13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 DLGAP3O95886 979 aa13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 DARSP14868 501 aaKnown RBP13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 SESN2P58004 480 aaPredicted RBP13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 SLC36A3Q495N2 470 aa13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 AASDHQ4L235 1098 aaPredicted RBP13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 SLC27A1Q6PCB7 646 aa13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 CRTC3Q6UUV7 619 aa13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 ZNF598Q86UK7 904 aaKnown RBP13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 ANKFN1Q8N957 763 aa13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 ADAM32Q8TC27 787 aa13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 C8orf48Q96LL4 319 aa13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 PPP1R36Q96LQ0 422 aa13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 ZNF560Q96MR9 790 aa13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 CITED4Q96RK1 184 aa13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 CAB39Q9Y376 341 aaPredicted RBP13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 DLGAP1O14490 977 aa13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 PPEF2O14830 753 aa13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 BCAS1O75363 584 aaPredicted RBP13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 C1QAP02745 245 aa13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 MBL2P11226 248 aaPredicted RBP13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 CES1P23141 567 aa13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 GLDCP23378 1020 aa13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 ILF2Q12905 390 aaKnown RBP13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 CCL14Q16627 93 aa13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 CNTD1Q8N815 330 aa13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 HDAC11Q96DB2 347 aa13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 DEPDC7Q96QD5 511 aa13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 AIFM2Q9BRQ8 373 aa13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 CHID1Q9BWS9 393 aa13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 LHPPQ9H008 270 aa13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 SP140LQ9H930 580 aa13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 STAP1Q9ULZ2 295 aa13.47□□□□□ -0.25
SYNGAP1-204ENST00000449372 NEMP1O14524 444 aa13.46□□□□□ -0.25
SYNGAP1-204ENST00000449372 NCAM2O15394 837 aa13.46□□□□□ -0.25
SYNGAP1-204ENST00000449372 GSNP06396 782 aa13.46□□□□□ -0.25
SYNGAP1-204ENST00000449372 HLCSP50747 726 aa13.46□□□□□ -0.25
SYNGAP1-204ENST00000449372 NDST1P52848 882 aa13.46□□□□□ -0.25
SYNGAP1-204ENST00000449372 CDC42EP1Q00587 391 aa13.46□□□□□ -0.25
SYNGAP1-204ENST00000449372 GOLGA7BQ2TAP0 167 aa13.46□□□□□ -0.25
SYNGAP1-204ENST00000449372 C6orf10Q5SRN2 563 aa13.46□□□□□ -0.25
SYNGAP1-204ENST00000449372 DNAAF3Q8N9W5 541 aa13.46□□□□□ -0.25
SYNGAP1-204ENST00000449372 MAPK15Q8TD08 544 aa13.46□□□□□ -0.25
SYNGAP1-204ENST00000449372 TOP1MTQ969P6 601 aa13.46□□□□□ -0.25
SYNGAP1-204ENST00000449372 SMYD2Q9NRG4 433 aa13.46□□□□□ -0.25
SYNGAP1-204ENST00000449372 AP4E1Q9UPM8 1137 aa13.46□□□□□ -0.25
SYNGAP1-204ENST00000449372 Q9Y3F1 56 aa13.46□□□□□ -0.25
SYNGAP1-204ENST00000449372 RAD51BO15315 384 aa13.46□□□□□ -0.25
SYNGAP1-204ENST00000449372 DAB1O75553 588 aa13.46□□□□□ -0.25
SYNGAP1-204ENST00000449372 POLD2P49005 469 aa13.46□□□□□ -0.25
SYNGAP1-204ENST00000449372 NIPAL4Q0D2K0 466 aa13.46□□□□□ -0.25
SYNGAP1-204ENST00000449372 AQP6Q13520 282 aa13.46□□□□□ -0.25
SYNGAP1-204ENST00000449372 PCLAFQ15004 111 aa13.46□□□□□ -0.25
SYNGAP1-204ENST00000449372 UBXN11Q5T124 520 aa13.46□□□□□ -0.25
SYNGAP1-204ENST00000449372 TLK2Q86UE8 772 aa13.46□□□□□ -0.25
SYNGAP1-204ENST00000449372 PNPT1Q8TCS8 783 aaKnown RBP13.46□□□□□ -0.25
SYNGAP1-204ENST00000449372 PPP1R13LQ8WUF5 828 aa13.46□□□□□ -0.25
SYNGAP1-204ENST00000449372 IFT80Q9P2H3 777 aaPredicted RBP13.46□□□□□ -0.25
SYNGAP1-204ENST00000449372 WDR27A2RRH5 827 aa13.46□□□□□ -0.26
SYNGAP1-204ENST00000449372 EVPLLA8MZ36 301 aa13.46□□□□□ -0.26
SYNGAP1-204ENST00000449372 ZW10O43264 779 aa13.46□□□□□ -0.26
SYNGAP1-204ENST00000449372 SLC12A2P55011 1212 aa13.46□□□□□ -0.26
SYNGAP1-204ENST00000449372 MFSD10Q14728 455 aa13.46□□□□□ -0.26
SYNGAP1-204ENST00000449372 FAM183BPQ6ZVS7 135 aa13.46□□□□□ -0.26
SYNGAP1-204ENST00000449372 GLRX5Q86SX6 157 aa13.46□□□□□ -0.26
SYNGAP1-204ENST00000449372 ZNF781Q8N8C0 355 aa13.46□□□□□ -0.26
SYNGAP1-204ENST00000449372 DTX3Q8N9I9 347 aa13.46□□□□□ -0.26
SYNGAP1-204ENST00000449372 COLGALT1Q8NBJ5 622 aa13.46□□□□□ -0.26
SYNGAP1-204ENST00000449372 CCNYQ8ND76 341 aa13.46□□□□□ -0.26
SYNGAP1-204ENST00000449372 UBA3Q8TBC4 463 aa13.46□□□□□ -0.26
SYNGAP1-204ENST00000449372 LPGAT1Q92604 370 aa13.46□□□□□ -0.26
SYNGAP1-204ENST00000449372 CERS2Q96G23 380 aa13.46□□□□□ -0.26
SYNGAP1-204ENST00000449372 NPAS2Q99743 824 aa13.46□□□□□ -0.26
SYNGAP1-204ENST00000449372 TMEM246Q9BRR3 403 aa13.46□□□□□ -0.26
SYNGAP1-204ENST00000449372 WDR55Q9H6Y2 383 aaPredicted RBP13.46□□□□□ -0.26
SYNGAP1-204ENST00000449372 C8orf4Q9NR00 106 aa13.46□□□□□ -0.26
SYNGAP1-204ENST00000449372 KLHL8Q9P2G9 620 aaPredicted RBP13.46□□□□□ -0.26
SYNGAP1-204ENST00000449372 SFMBT1Q9UHJ3 866 aa13.46□□□□□ -0.26
SYNGAP1-204ENST00000449372 TSPAN16Q9UKR8 245 aa13.46□□□□□ -0.26
SYNGAP1-204ENST00000449372 EIF3LQ9Y262 564 aaKnown RBP13.46□□□□□ -0.26
SYNGAP1-204ENST00000449372 MAU2Q9Y6X3 613 aa13.46□□□□□ -0.26
SYNGAP1-204ENST00000449372 HMX2A2RU54 273 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms