RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 RANBP10Q6VN20 620 aa9.19□□□□□ -0.94
RFX3-207ENST00000449190 DBX2Q6ZNG2 339 aa9.19□□□□□ -0.94
RFX3-207ENST00000449190 PIP4P1Q86T03 277 aa9.19□□□□□ -0.94
RFX3-207ENST00000449190 HORMAD1Q86X24 394 aa9.19□□□□□ -0.94
RFX3-207ENST00000449190 ZSWIM9Q86XI8 627 aa9.19□□□□□ -0.94
RFX3-207ENST00000449190 PPIL6Q8IXY8 311 aa9.19□□□□□ -0.94
RFX3-207ENST00000449190 TRIB3Q96RU7 358 aa9.19□□□□□ -0.94
RFX3-207ENST00000449190 APOL2Q9BQE5 337 aa9.19□□□□□ -0.94
RFX3-207ENST00000449190 ERP44Q9BS26 406 aa9.19□□□□□ -0.94
RFX3-207ENST00000449190 WRAP53Q9BUR4 548 aaKnown RBP9.19□□□□□ -0.94
RFX3-207ENST00000449190 CARD6Q9BX69 1037 aa9.19□□□□□ -0.94
RFX3-207ENST00000449190 RAB17Q9H0T7 212 aa9.19□□□□□ -0.94
RFX3-207ENST00000449190 GAREM1Q9H706 876 aa9.19□□□□□ -0.94
RFX3-207ENST00000449190 EIF2B3Q9NR50 452 aaKnown RBP9.19□□□□□ -0.94
RFX3-207ENST00000449190 RAD18Q9NS91 495 aa9.19□□□□□ -0.94
RFX3-207ENST00000449190 B4GALT6Q9UBX8 382 aa9.19□□□□□ -0.94
RFX3-207ENST00000449190 ANAPC5Q9UJX4 755 aa9.19□□□□□ -0.94
RFX3-207ENST00000449190 DMTF1Q9Y222 760 aa9.19□□□□□ -0.94
RFX3-207ENST00000449190 ANKRD6Q9Y2G4 727 aa9.19□□□□□ -0.94
RFX3-207ENST00000449190 CHD5Q8TDI0 1954 aa9.19□□□□□ -0.94
RFX3-207ENST00000449190 PI4KAP42356 2102 aa9.19□□□□□ -0.94
RFX3-207ENST00000449190 C1orf232A0A0U1RR37 186 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 A0A1W2PR77 199 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 IGLON5A6NGN9 336 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 SMAPO00193 183 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 PSMD11O00231 422 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 DNALI1O14645 258 aaPredicted RBP9.18□□□□□ -0.94
RFX3-207ENST00000449190 RAD51CO43502 376 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 MAGEC1O60732 1142 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 USP12O75317 370 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 SUN1O94901 812 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 CRTAMO95727 393 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 ADRB1P08588 477 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 ZNF30P17039 623 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 TPSB2P20231 275 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 CD38P28907 300 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 MAT2AP31153 395 aaKnown RBP9.18□□□□□ -0.94
RFX3-207ENST00000449190 AKT2P31751 481 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 MMP12P39900 470 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 NPY2RP49146 381 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 NOVA1P51513 510 aaKnown RBP9.18□□□□□ -0.94
RFX3-207ENST00000449190 C21orf59P57076 290 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 TUBB4BP68371 445 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 SEMG2Q02383 582 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 OVGP1Q12889 678 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 CALCOCO2Q13137 446 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 NUMA1Q14980 2115 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 TPSAB1Q15661 275 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 GLE1Q53GS7 698 aaKnown RBP9.18□□□□□ -0.94
RFX3-207ENST00000449190 N4BP2L1Q5TBK1 243 aaPredicted RBP9.18□□□□□ -0.94
RFX3-207ENST00000449190 IZUMO3Q5VZ72 239 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 KCTD11Q693B1 232 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 CRTC1Q6UUV9 634 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 IQCHQ86VS3 1027 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 KLHDC8BQ8IXV7 354 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 MMGT1Q8N4V1 131 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 MFSD2AQ8NA29 543 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 OR2I1PQ8NGU4 316 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 BLOC1S5Q8TDH9 187 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 CEP192Q8TEP8 1941 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 ASB12Q8WXK4 309 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 KLK6Q92876 244 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 VOPP1Q96AW1 172 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 SNF8Q96H20 258 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 SERAC1Q96JX3 654 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 MCCC1Q96RQ3 725 aaPredicted RBP9.18□□□□□ -0.94
RFX3-207ENST00000449190 GORASP1Q9BQQ3 440 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 SLC17A9Q9BYT1 436 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 TRIM31Q9BZY9 425 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 ZFYVE1Q9HBF4 777 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 ARNT2Q9HBZ2 717 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 AASDHPPTQ9NRN7 309 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 PKD2L2Q9NZM6 624 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 BFARQ9NZS9 450 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 ITM2BQ9Y287 266 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 NEU2Q9Y3R4 380 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 PCDHGB2Q9Y5G2 931 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 SNX11Q9Y5W9 270 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 SLCO1B1Q9Y6L6 691 aa9.18□□□□□ -0.94
RFX3-207ENST00000449190 CEP250Q9BV73 2442 aa9.17□□□□□ -0.94
RFX3-207ENST00000449190 TNRC6BQ9UPQ9 1833 aaKnown RBP9.17□□□□□ -0.94
RFX3-207ENST00000449190 RGSL1A5PLK6 1076 aa9.17□□□□□ -0.94
RFX3-207ENST00000449190 NPIPB15A6NHN6 443 aaPredicted RBP9.17□□□□□ -0.94
RFX3-207ENST00000449190 PRAMEF26H0Y7S4 382 aa9.17□□□□□ -0.94
RFX3-207ENST00000449190 WNT9AO14904 365 aa9.17□□□□□ -0.94
RFX3-207ENST00000449190 SLC31A1O15431 190 aa9.17□□□□□ -0.94
RFX3-207ENST00000449190 HEXIM1O94992 359 aaKnown RBP9.17□□□□□ -0.94
RFX3-207ENST00000449190 CLDN7O95471 211 aa9.17□□□□□ -0.94
RFX3-207ENST00000449190 PAK4O96013 591 aaPredicted RBP9.17□□□□□ -0.94
RFX3-207ENST00000449190 SLC4A1P02730 911 aa9.17□□□□□ -0.94
RFX3-207ENST00000449190 WNT1P04628 370 aa9.17□□□□□ -0.94
RFX3-207ENST00000449190 ATXN1LP0C7T5 689 aaKnown RBP9.17□□□□□ -0.94
RFX3-207ENST00000449190 PIRTP0C851 137 aa9.17□□□□□ -0.94
RFX3-207ENST00000449190 C6P13671 934 aa9.17□□□□□ -0.94
RFX3-207ENST00000449190 TPH1P17752 444 aa9.17□□□□□ -0.94
RFX3-207ENST00000449190 CTSKP43235 329 aa9.17□□□□□ -0.94
RFX3-207ENST00000449190 CHRNA4P43681 627 aa9.17□□□□□ -0.94
RFX3-207ENST00000449190 PPP2CBP62714 309 aa9.17□□□□□ -0.94
RFX3-207ENST00000449190 PPP2CAP67775 309 aa9.17□□□□□ -0.94
RFX3-207ENST00000449190 DSG2Q14126 1118 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms