RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 ANXA6P08133 673 aa12.72□□□□□ -0.37
PRPF40A-203ENST00000448428 PYGMP11217 842 aa12.72□□□□□ -0.37
PRPF40A-203ENST00000448428 MYCLP1P12525 358 aaPredicted RBP12.72□□□□□ -0.37
PRPF40A-203ENST00000448428 JUPP14923 745 aa12.72□□□□□ -0.37
PRPF40A-203ENST00000448428 ZNF30P17039 623 aa12.72□□□□□ -0.37
PRPF40A-203ENST00000448428 CD68P34810 354 aaPredicted RBP12.72□□□□□ -0.37
PRPF40A-203ENST00000448428 DUSP3P51452 185 aaPredicted RBP12.72□□□□□ -0.37
PRPF40A-203ENST00000448428 STC1P52823 247 aa12.72□□□□□ -0.37
PRPF40A-203ENST00000448428 RWDD2BP57060 319 aa12.72□□□□□ -0.37
PRPF40A-203ENST00000448428 E2F1Q01094 437 aa12.72□□□□□ -0.37
PRPF40A-203ENST00000448428 DPTQ07507 201 aa12.72□□□□□ -0.37
PRPF40A-203ENST00000448428 KIF5AQ12840 1032 aa12.72□□□□□ -0.37
PRPF40A-203ENST00000448428 CAMK2BQ13554 666 aa12.72□□□□□ -0.37
PRPF40A-203ENST00000448428 ELOCQ15369 112 aa12.72□□□□□ -0.37
PRPF40A-203ENST00000448428 TCEA2Q15560 299 aa12.72□□□□□ -0.37
PRPF40A-203ENST00000448428 ST3GAL2Q16842 350 aa12.72□□□□□ -0.37
PRPF40A-203ENST00000448428 AADACL2Q6P093 401 aa12.72□□□□□ -0.37
PRPF40A-203ENST00000448428 HEATR4Q86WZ0 1026 aa12.72□□□□□ -0.37
PRPF40A-203ENST00000448428 FSTL5Q8N475 847 aaPredicted RBP12.72□□□□□ -0.37
PRPF40A-203ENST00000448428 KDF1Q8NAX2 398 aaPredicted RBP12.72□□□□□ -0.37
PRPF40A-203ENST00000448428 SPATA22Q8NHS9 363 aa12.72□□□□□ -0.37
PRPF40A-203ENST00000448428 ALG3Q92685 438 aa12.72□□□□□ -0.37
PRPF40A-203ENST00000448428 AP2M1Q96CW1 435 aa12.72□□□□□ -0.37
PRPF40A-203ENST00000448428 PDXPQ96GD0 296 aa12.72□□□□□ -0.37
PRPF40A-203ENST00000448428 LYSMD1Q96S90 227 aa12.72□□□□□ -0.37
PRPF40A-203ENST00000448428 MLPHQ9BV36 600 aaPredicted RBP12.72□□□□□ -0.37
PRPF40A-203ENST00000448428 BOCQ9BWV1 1114 aa12.72□□□□□ -0.37
PRPF40A-203ENST00000448428 ADGRE3Q9BY15 652 aa12.72□□□□□ -0.37
PRPF40A-203ENST00000448428 WDR26Q9H7D7 661 aa12.72□□□□□ -0.37
PRPF40A-203ENST00000448428 USP29Q9HBJ7 922 aa12.72□□□□□ -0.37
PRPF40A-203ENST00000448428 FGF22Q9HCT0 170 aa12.72□□□□□ -0.37
PRPF40A-203ENST00000448428 PHPT1Q9NRX4 125 aaPredicted RBP12.72□□□□□ -0.37
PRPF40A-203ENST00000448428 EFR3BQ9Y2G0 817 aa12.72□□□□□ -0.37
PRPF40A-203ENST00000448428 DGKBQ9Y6T7 804 aa12.72□□□□□ -0.37
PRPF40A-203ENST00000448428 ASXL3Q9C0F0 2248 aa12.72□□□□□ -0.37
PRPF40A-203ENST00000448428 TPRP12270 2363 aaKnown RBP12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 GOLGA6CA6NDK9 693 aa12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 GOLGA6BA6NDN3 693 aa12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 GOLGA6L6A8MZA4 724 aa12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 HACD1B0YJ81 288 aa12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 PDE2AO00408 941 aaPredicted RBP12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 MT-CYBP00156 380 aaPredicted RBP12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 CAPNS1P04632 268 aa12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 GOLGA6DP0CG33 693 aa12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 KELP23276 732 aa12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 PTPN7P35236 360 aa12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 CDK3Q00526 305 aa12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 INSM1Q01101 510 aaPredicted RBP12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 CDK18Q07002 472 aa12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 GALNT3Q14435 633 aa12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 SLC14A2Q15849 920 aa12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 PCSK7Q16549 785 aa12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 C6orf132Q5T0Z8 1188 aa12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 HES3Q5TGS1 186 aa12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 RAET1GQ6H3X3 334 aa12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 LVRNQ6Q4G3 990 aa12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 PEX26Q7Z412 305 aa12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 NLRP8Q86W28 1048 aa12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 NRSN1Q8IZ57 195 aa12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 ZNF567Q8N184 647 aa12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 TXLNBQ8N3L3 684 aa12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 SDR16C5Q8N3Y7 309 aa12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 HTR3CQ8WXA8 447 aa12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 SCAMP4Q969E2 229 aa12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 AGAP2Q99490 1192 aa12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 RIOK2Q9BVS4 552 aaKnown RBP12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 OSBPL8Q9BZF1 889 aa12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 C10orf88Q9H8K7 445 aa12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 CYP4F12Q9HCS2 524 aa12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 GOLGA6AQ9NYA3 693 aa12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 UBP1Q9NZI7 540 aa12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 MOSPD1Q9UJG1 213 aa12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 AMFRQ9UKV5 643 aa12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 DNPEPQ9ULA0 475 aa12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 KNTC1P50748 2209 aa12.71□□□□□ -0.37
PRPF40A-203ENST00000448428 RP1P56715 2156 aa12.7□□□□□ -0.38
PRPF40A-203ENST00000448428 ARHGEF17Q96PE2 2063 aaPredicted RBP12.7□□□□□ -0.38
PRPF40A-203ENST00000448428 C1orf232A0A0U1RR37 186 aa12.7□□□□□ -0.38
PRPF40A-203ENST00000448428 CPED1A4D0V7 1026 aa12.7□□□□□ -0.38
PRPF40A-203ENST00000448428 TMEM8BA6NDV4 472 aa12.7□□□□□ -0.38
PRPF40A-203ENST00000448428 TRABD2BA6NFA1 517 aa12.7□□□□□ -0.38
PRPF40A-203ENST00000448428 APOC4-APOC2K7ER74 178 aa12.7□□□□□ -0.38
PRPF40A-203ENST00000448428 MTSS1O43312 755 aa12.7□□□□□ -0.38
PRPF40A-203ENST00000448428 OPA1O60313 960 aa12.7□□□□□ -0.38
PRPF40A-203ENST00000448428 PMPCBO75439 489 aa12.7□□□□□ -0.38
PRPF40A-203ENST00000448428 SOD1P00441 154 aa12.7□□□□□ -0.38
PRPF40A-203ENST00000448428 APOC2P02655 101 aa12.7□□□□□ -0.38
PRPF40A-203ENST00000448428 CEACAM5P06731 702 aa12.7□□□□□ -0.38
PRPF40A-203ENST00000448428 NFKB1P19838 968 aa12.7□□□□□ -0.38
PRPF40A-203ENST00000448428 TEAD1P28347 426 aa12.7□□□□□ -0.38
PRPF40A-203ENST00000448428 GPR1P46091 355 aa12.7□□□□□ -0.38
PRPF40A-203ENST00000448428 POLD2P49005 469 aa12.7□□□□□ -0.38
PRPF40A-203ENST00000448428 SPINT3P49223 89 aa12.7□□□□□ -0.38
PRPF40A-203ENST00000448428 GSDMDP57764 484 aa12.7□□□□□ -0.38
PRPF40A-203ENST00000448428 TARDBPQ13148 414 aaKnown RBP eCLIP12.7□□□□□ -0.38
PRPF40A-203ENST00000448428 XRCC4Q13426 336 aa12.7□□□□□ -0.38
PRPF40A-203ENST00000448428 NOMO1Q15155 1222 aa12.7□□□□□ -0.38
PRPF40A-203ENST00000448428 NR0B2Q15466 257 aa12.7□□□□□ -0.38
PRPF40A-203ENST00000448428 CCDC181Q5TID7 509 aa12.7□□□□□ -0.38
PRPF40A-203ENST00000448428 GUSBP11Q6P575 273 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms